RNA–Protein interactions for RNA: ENST00000417023.5

DDX39B-203, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-203ENST00000417023 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
DDX39B-203ENST00000417023 ARHGEF28Q8N1W1 1705 aaKnown RBP18.55■□□□□ 0.56
DDX39B-203ENST00000417023 HSPA1LP34931 641 aa18.55■□□□□ 0.56
DDX39B-203ENST00000417023 ADGRB2O60241 1585 aa18.53■□□□□ 0.56
DDX39B-203ENST00000417023 NBPF1Q3BBV0 1214 aa18.53■□□□□ 0.56
DDX39B-203ENST00000417023 PRAM1Q96QH2 718 aa18.53■□□□□ 0.56
DDX39B-203ENST00000417023 TRAK1Q9UPV9 953 aa18.52■□□□□ 0.56
DDX39B-203ENST00000417023 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.55
DDX39B-203ENST00000417023 FMN2Q9NZ56 1722 aa18.51■□□□□ 0.55
DDX39B-203ENST00000417023 AHDC1Q5TGY3 1603 aaPredicted RBP18.5■□□□□ 0.55
DDX39B-203ENST00000417023 BRINP3Q76B58 766 aa18.5■□□□□ 0.55
DDX39B-203ENST00000417023 NBPF8Q3BBV2 869 aa18.49■□□□□ 0.55
DDX39B-203ENST00000417023 GPRASP1Q5JY77 1395 aa18.48■□□□□ 0.55
DDX39B-203ENST00000417023 POGKQ9P215 609 aa18.48■□□□□ 0.55
DDX39B-203ENST00000417023 TIMELESSQ9UNS1 1208 aa18.48■□□□□ 0.55
DDX39B-203ENST00000417023 PHLPP1O60346 1717 aa18.47■□□□□ 0.55
DDX39B-203ENST00000417023 NHSL1Q5SYE7 1610 aa18.47■□□□□ 0.55
DDX39B-203ENST00000417023 RALGAPBQ86X10 1494 aa18.46■□□□□ 0.55
DDX39B-203ENST00000417023 COL16A1Q07092 1604 aaPredicted RBP18.46■□□□□ 0.55
DDX39B-203ENST00000417023 ROCK2O75116 1388 aaKnown RBP18.44■□□□□ 0.54
DDX39B-203ENST00000417023 SAFB2Q14151 953 aaKnown RBP eCLIP18.44■□□□□ 0.54
DDX39B-203ENST00000417023 CCER1Q8TC90 406 aaPredicted RBP18.43■□□□□ 0.54
DDX39B-203ENST00000417023 ANKARQ7Z5J8 1434 aa18.42■□□□□ 0.54
DDX39B-203ENST00000417023 ORAI2Q96SN7 254 aa18.42■□□□□ 0.54
DDX39B-203ENST00000417023 USP32Q8NFA0 1604 aa18.41■□□□□ 0.54
DDX39B-203ENST00000417023 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
DDX39B-203ENST00000417023 RGPD8O14715 1765 aaPredicted RBP18.4■□□□□ 0.54
DDX39B-203ENST00000417023 TULP4Q9NRJ4 1543 aa18.4■□□□□ 0.54
DDX39B-203ENST00000417023 CENPJQ9HC77 1338 aaPredicted RBP18.4■□□□□ 0.54
DDX39B-203ENST00000417023 KIF1AQ12756 1690 aa18.4■□□□□ 0.54
DDX39B-203ENST00000417023 QRICH2Q9H0J4 1663 aa18.4■□□□□ 0.54
DDX39B-203ENST00000417023 EIF3AQ14152 1382 aaKnown RBP18.4■□□□□ 0.54
DDX39B-203ENST00000417023 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
DDX39B-203ENST00000417023 ESCO1Q5FWF5 840 aa18.38■□□□□ 0.53
DDX39B-203ENST00000417023 HIRIP3Q9BW71 556 aaPredicted RBP18.38■□□□□ 0.53
DDX39B-203ENST00000417023 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
DDX39B-203ENST00000417023 JCADQ9P266 1359 aa18.37■□□□□ 0.53
DDX39B-203ENST00000417023 SHPRHQ149N8 1683 aa18.37■□□□□ 0.53
DDX39B-203ENST00000417023 SOS2Q07890 1332 aaPredicted RBP18.36■□□□□ 0.53
DDX39B-203ENST00000417023 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
DDX39B-203ENST00000417023 ATP7BP35670 1465 aa18.34■□□□□ 0.53
DDX39B-203ENST00000417023 PXDNQ92626 1479 aa18.34■□□□□ 0.53
DDX39B-203ENST00000417023 NPHP3Q7Z494 1330 aa18.34■□□□□ 0.53
DDX39B-203ENST00000417023 PRR36Q9H6K5 1346 aa18.34■□□□□ 0.53
DDX39B-203ENST00000417023 DDX17Q92841 729 aaKnown RBP18.34■□□□□ 0.53
DDX39B-203ENST00000417023 ITSN1Q15811 1721 aa18.34■□□□□ 0.53
DDX39B-203ENST00000417023 MED1Q15648 1581 aaPredicted RBP18.34■□□□□ 0.53
DDX39B-203ENST00000417023 SBNO2Q9Y2G9 1366 aa18.33■□□□□ 0.53
DDX39B-203ENST00000417023 TOPAZ1Q8N9V7 1692 aa18.33■□□□□ 0.52
DDX39B-203ENST00000417023 LRRC59Q96AG4 307 aaKnown RBP18.32■□□□□ 0.52
DDX39B-203ENST00000417023 CDK19Q9BWU1 502 aa18.32■□□□□ 0.52
DDX39B-203ENST00000417023 PHF8Q9UPP1 1060 aa18.32■□□□□ 0.52
DDX39B-203ENST00000417023 FOXO3O43524 673 aa18.31■□□□□ 0.52
DDX39B-203ENST00000417023 SPATA31A6Q5VVP1 1343 aa18.29■□□□□ 0.52
DDX39B-203ENST00000417023 NUDT16Q96DE0 195 aaKnown RBP18.29■□□□□ 0.52
DDX39B-203ENST00000417023 PNPLA6Q8IY17 1366 aa18.29■□□□□ 0.52
DDX39B-203ENST00000417023 COL22A1Q8NFW1 1626 aaPredicted RBP18.27■□□□□ 0.52
DDX39B-203ENST00000417023 EVC2Q86UK5 1308 aa18.26■□□□□ 0.51
DDX39B-203ENST00000417023 CCDC61Q9Y6R9 512 aa18.26■□□□□ 0.51
DDX39B-203ENST00000417023 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
DDX39B-203ENST00000417023 TRPM3Q9HCF6 1732 aaPredicted RBP18.25■□□□□ 0.51
DDX39B-203ENST00000417023 LRP6O75581 1613 aa18.24■□□□□ 0.51
DDX39B-203ENST00000417023 PLEKHG3A1L390 1219 aa18.24■□□□□ 0.51
DDX39B-203ENST00000417023 KRT28Q7Z3Y7 464 aa18.24■□□□□ 0.51
DDX39B-203ENST00000417023 SBNO1A3KN83 1393 aa18.24■□□□□ 0.51
DDX39B-203ENST00000417023 POLR3AO14802 1390 aaPredicted RBP18.24■□□□□ 0.51
DDX39B-203ENST00000417023 USP47Q96K76 1375 aa18.23■□□□□ 0.51
DDX39B-203ENST00000417023 SRPK2P78362 688 aaKnown RBP18.23■□□□□ 0.51
DDX39B-203ENST00000417023 XPCQ01831 940 aaPredicted RBP18.23■□□□□ 0.51
DDX39B-203ENST00000417023 CABP2Q9NPB3 220 aa18.23■□□□□ 0.51
DDX39B-203ENST00000417023 SPATA31A3Q5VYP0 1347 aa18.23■□□□□ 0.51
DDX39B-203ENST00000417023 PSME1Q06323 249 aa18.22■□□□□ 0.51
DDX39B-203ENST00000417023 TESK2Q96S53 571 aa18.22■□□□□ 0.51
DDX39B-203ENST00000417023 TNS3Q68CZ2 1445 aa18.22■□□□□ 0.51
DDX39B-203ENST00000417023 DISP3Q9P2K9 1392 aa18.21■□□□□ 0.51
DDX39B-203ENST00000417023 ST20-MTHFSA0A0A6YYL1 179 aa18.21■□□□□ 0.51
DDX39B-203ENST00000417023 PPIP5K1Q6PFW1 1433 aa18.21■□□□□ 0.51
DDX39B-203ENST00000417023 ALS2Q96Q42 1657 aa18.2■□□□□ 0.5
DDX39B-203ENST00000417023 SLC24A1O60721 1099 aa18.2■□□□□ 0.5
DDX39B-203ENST00000417023 ATAD2Q6PL18 1390 aa18.19■□□□□ 0.5
DDX39B-203ENST00000417023 NGDNQ8NEJ9 315 aaKnown RBP18.19■□□□□ 0.5
DDX39B-203ENST00000417023 PUS7Q96PZ0 661 aaKnown RBP18.19■□□□□ 0.5
DDX39B-203ENST00000417023 ACEP12821 1306 aa18.18■□□□□ 0.5
DDX39B-203ENST00000417023 ARHGEF10O15013 1369 aa18.17■□□□□ 0.5
DDX39B-203ENST00000417023 BRD4O60885 1362 aaPredicted RBP18.16■□□□□ 0.5
DDX39B-203ENST00000417023 CABP1Q9NZU7 370 aa18.15■□□□□ 0.5
DDX39B-203ENST00000417023 AKAP12Q02952 1782 aa18.14■□□□□ 0.5
DDX39B-203ENST00000417023 NUTM2BA6NNL0 878 aaPredicted RBP18.14■□□□□ 0.49
DDX39B-203ENST00000417023 NUTM2EB1AL46 878 aaPredicted RBP18.14■□□□□ 0.49
DDX39B-203ENST00000417023 NUTM2AQ8IVF1 878 aaPredicted RBP18.14■□□□□ 0.49
DDX39B-203ENST00000417023 ABCA3Q99758 1704 aa18.14■□□□□ 0.49
DDX39B-203ENST00000417023 MARF1Q9Y4F3 1742 aaKnown RBP18.14■□□□□ 0.49
DDX39B-203ENST00000417023 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
DDX39B-203ENST00000417023 RGS17Q9UGC6 210 aaPredicted RBP18.13■□□□□ 0.49
DDX39B-203ENST00000417023 CPSF1Q10570 1443 aaKnown RBP18.13■□□□□ 0.49
DDX39B-203ENST00000417023 CRYBG1Q9Y4K1 1723 aa18.12■□□□□ 0.49
DDX39B-203ENST00000417023 USP6P35125 1406 aa18.12■□□□□ 0.49
DDX39B-203ENST00000417023 SSH2Q76I76 1423 aa18.12■□□□□ 0.49
DDX39B-203ENST00000417023 CD163L1Q9NR16 1453 aa18.1■□□□□ 0.49
DDX39B-203ENST00000417023 MEX3CQ5U5Q3 659 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms