RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 CAMSAP1Q5T5Y3 1602 aa16.57■□□□□ 0.24
LRRTM1-205ENST00000417012 CENPJQ9HC77 1338 aaPredicted RBP16.56■□□□□ 0.24
LRRTM1-205ENST00000417012 YEATS2Q9ULM3 1422 aa16.56■□□□□ 0.24
LRRTM1-205ENST00000417012 DIP2CQ9Y2E4 1556 aa16.56■□□□□ 0.24
LRRTM1-205ENST00000417012 APAF1O14727 1248 aa16.56■□□□□ 0.24
LRRTM1-205ENST00000417012 C14orf93Q9H972 538 aaKnown RBP16.56■□□□□ 0.24
LRRTM1-205ENST00000417012 E9PSI1 815 aa16.55■□□□□ 0.24
LRRTM1-205ENST00000417012 RICTORQ6R327 1708 aa16.54■□□□□ 0.24
LRRTM1-205ENST00000417012 NGEFQ8N5V2 710 aa16.53■□□□□ 0.24
LRRTM1-205ENST00000417012 FRAT1Q92837 279 aaPredicted RBP16.53■□□□□ 0.24
LRRTM1-205ENST00000417012 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
LRRTM1-205ENST00000417012 BCAR3O75815 825 aa16.53■□□□□ 0.24
LRRTM1-205ENST00000417012 SLC12A5Q9H2X9 1139 aa16.53■□□□□ 0.24
LRRTM1-205ENST00000417012 IDI1Q13907 227 aa16.52■□□□□ 0.24
LRRTM1-205ENST00000417012 BRPF3Q9ULD4 1205 aa16.52■□□□□ 0.24
LRRTM1-205ENST00000417012 CGNL1Q0VF96 1302 aa16.52■□□□□ 0.23
LRRTM1-205ENST00000417012 TNNT2P45379 298 aaPredicted RBP16.51■□□□□ 0.23
LRRTM1-205ENST00000417012 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.51■□□□□ 0.23
LRRTM1-205ENST00000417012 MYO3AQ8NEV4 1616 aa16.51■□□□□ 0.23
LRRTM1-205ENST00000417012 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
LRRTM1-205ENST00000417012 SLC24A1O60721 1099 aa16.51■□□□□ 0.23
LRRTM1-205ENST00000417012 SETBP1Q9Y6X0 1596 aa16.51■□□□□ 0.23
LRRTM1-205ENST00000417012 QRICH2Q9H0J4 1663 aa16.51■□□□□ 0.23
LRRTM1-205ENST00000417012 SAFB2Q14151 953 aaKnown RBP eCLIP16.51■□□□□ 0.23
LRRTM1-205ENST00000417012 NINLQ9Y2I6 1382 aa16.5■□□□□ 0.23
LRRTM1-205ENST00000417012 VIRMAQ69YN4 1812 aaKnown RBP16.5■□□□□ 0.23
LRRTM1-205ENST00000417012 FAM69CQ0P6D2 419 aa16.5■□□□□ 0.23
LRRTM1-205ENST00000417012 CANXP27824 592 aaKnown RBP16.49■□□□□ 0.23
LRRTM1-205ENST00000417012 PDE3AQ14432 1141 aa16.49■□□□□ 0.23
LRRTM1-205ENST00000417012 FRAT2O75474 233 aaPredicted RBP16.49■□□□□ 0.23
LRRTM1-205ENST00000417012 RPGRIP1LQ68CZ1 1315 aa16.49■□□□□ 0.23
LRRTM1-205ENST00000417012 MAPK8IP3Q9UPT6 1336 aa16.49■□□□□ 0.23
LRRTM1-205ENST00000417012 SBNO2Q9Y2G9 1366 aa16.48■□□□□ 0.23
LRRTM1-205ENST00000417012 TSPOAP1O95153 1857 aa16.48■□□□□ 0.23
LRRTM1-205ENST00000417012 PIK3C2BO00750 1634 aa16.47■□□□□ 0.23
LRRTM1-205ENST00000417012 VGFO15240 615 aaPredicted RBP16.47■□□□□ 0.23
LRRTM1-205ENST00000417012 IGHDP01880 384 aa16.47■□□□□ 0.23
LRRTM1-205ENST00000417012 FBXO31Q5XUX0 539 aaPredicted RBP16.47■□□□□ 0.23
LRRTM1-205ENST00000417012 STK26Q9P289 416 aa16.47■□□□□ 0.23
LRRTM1-205ENST00000417012 MYO5BQ9ULV0 1848 aa16.47■□□□□ 0.23
LRRTM1-205ENST00000417012 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
LRRTM1-205ENST00000417012 NSD3Q9BZ95 1437 aa16.47■□□□□ 0.23
LRRTM1-205ENST00000417012 NEXMIFQ5QGS0 1516 aa16.46■□□□□ 0.23
LRRTM1-205ENST00000417012 CLUAP1Q96AJ1 413 aa16.46■□□□□ 0.23
LRRTM1-205ENST00000417012 GLI2P10070 1586 aa16.45■□□□□ 0.22
LRRTM1-205ENST00000417012 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
LRRTM1-205ENST00000417012 BECN1Q14457 450 aa16.44■□□□□ 0.22
LRRTM1-205ENST00000417012 EIF5BO60841 1220 aaKnown RBP16.43■□□□□ 0.22
LRRTM1-205ENST00000417012 MORC1Q86VD1 984 aa16.43■□□□□ 0.22
LRRTM1-205ENST00000417012 CABP2Q9NPB3 220 aa16.43■□□□□ 0.22
LRRTM1-205ENST00000417012 COG6Q9Y2V7 657 aa16.43■□□□□ 0.22
LRRTM1-205ENST00000417012 POLR3AO14802 1390 aaPredicted RBP16.43■□□□□ 0.22
LRRTM1-205ENST00000417012 WWC1Q8IX03 1113 aa16.43■□□□□ 0.22
LRRTM1-205ENST00000417012 PANK1Q8TE04 598 aa16.43■□□□□ 0.22
LRRTM1-205ENST00000417012 RIMBP3CA6NJZ7 1639 aa16.42■□□□□ 0.22
LRRTM1-205ENST00000417012 RIMBP3BA6NNM3 1639 aa16.42■□□□□ 0.22
LRRTM1-205ENST00000417012 RIMBP3Q9UFD9 1639 aa16.42■□□□□ 0.22
LRRTM1-205ENST00000417012 USP19O94966 1318 aa16.42■□□□□ 0.22
LRRTM1-205ENST00000417012 UBE2Q2Q8WVN8 375 aa16.42■□□□□ 0.22
LRRTM1-205ENST00000417012 ARHGAP31Q2M1Z3 1444 aa16.42■□□□□ 0.22
LRRTM1-205ENST00000417012 ARHGEF28Q8N1W1 1705 aaKnown RBP16.41■□□□□ 0.22
LRRTM1-205ENST00000417012 SLC52A1Q9NWF4 448 aa16.41■□□□□ 0.22
LRRTM1-205ENST00000417012 PREX1Q8TCU6 1659 aa16.4■□□□□ 0.22
LRRTM1-205ENST00000417012 PMFBP1Q8TBY8 1022 aa16.4■□□□□ 0.22
LRRTM1-205ENST00000417012 EVC2Q86UK5 1308 aa16.39■□□□□ 0.21
LRRTM1-205ENST00000417012 AAMPQ13685 434 aa16.39■□□□□ 0.21
LRRTM1-205ENST00000417012 TULP4Q9NRJ4 1543 aa16.39■□□□□ 0.21
LRRTM1-205ENST00000417012 MLECQ14165 292 aa16.39■□□□□ 0.21
LRRTM1-205ENST00000417012 UPF2Q9HAU5 1272 aaKnown RBP16.38■□□□□ 0.21
LRRTM1-205ENST00000417012 SEC24BO95487 1268 aa16.37■□□□□ 0.21
LRRTM1-205ENST00000417012 NEUROD2Q15784 382 aa16.37■□□□□ 0.21
LRRTM1-205ENST00000417012 DIP2BQ9P265 1576 aa16.37■□□□□ 0.21
LRRTM1-205ENST00000417012 TMEM131LA2VDJ0 1609 aa16.37■□□□□ 0.21
LRRTM1-205ENST00000417012 RUNDC1Q96C34 613 aa16.37■□□□□ 0.21
LRRTM1-205ENST00000417012 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
LRRTM1-205ENST00000417012 MTHFSP49914 203 aa16.36■□□□□ 0.21
LRRTM1-205ENST00000417012 RARSP54136 660 aaKnown RBP16.36■□□□□ 0.21
LRRTM1-205ENST00000417012 SRPK2P78362 688 aaKnown RBP16.36■□□□□ 0.21
LRRTM1-205ENST00000417012 RRP7AQ9Y3A4 280 aaKnown RBP16.36■□□□□ 0.21
LRRTM1-205ENST00000417012 MINK1Q8N4C8 1332 aaPredicted RBP16.36■□□□□ 0.21
LRRTM1-205ENST00000417012 ZMYM3Q14202 1370 aa16.35■□□□□ 0.21
LRRTM1-205ENST00000417012 NLRP1Q9C000 1473 aa16.35■□□□□ 0.21
LRRTM1-205ENST00000417012 SHPRHQ149N8 1683 aa16.35■□□□□ 0.21
LRRTM1-205ENST00000417012 SLKQ9H2G2 1235 aaPredicted RBP16.35■□□□□ 0.21
LRRTM1-205ENST00000417012 PRAM1Q96QH2 718 aa16.35■□□□□ 0.21
LRRTM1-205ENST00000417012 IQSEC2Q5JU85 1478 aa16.33■□□□□ 0.21
LRRTM1-205ENST00000417012 TCP11L2Q8N4U5 519 aa16.33■□□□□ 0.2
LRRTM1-205ENST00000417012 WDR63Q8IWG1 891 aa16.32■□□□□ 0.2
LRRTM1-205ENST00000417012 ANKRD36BQ8N2N9 1353 aa16.32■□□□□ 0.2
LRRTM1-205ENST00000417012 POGKQ9P215 609 aa16.32■□□□□ 0.2
LRRTM1-205ENST00000417012 PCDHB15Q9Y5E8 787 aa16.32■□□□□ 0.2
LRRTM1-205ENST00000417012 ZFYVE9O95405 1425 aa16.31■□□□□ 0.2
LRRTM1-205ENST00000417012 TBC1D32Q96NH3 1257 aa16.31■□□□□ 0.2
LRRTM1-205ENST00000417012 RWDD1Q9H446 243 aaPredicted RBP16.31■□□□□ 0.2
LRRTM1-205ENST00000417012 RLBP1P12271 317 aa16.3■□□□□ 0.2
LRRTM1-205ENST00000417012 FAM43AQ8N2R8 423 aa16.3■□□□□ 0.2
LRRTM1-205ENST00000417012 CFAP53Q96M91 514 aa16.3■□□□□ 0.2
LRRTM1-205ENST00000417012 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
LRRTM1-205ENST00000417012 PDZRN3Q9UPQ7 1066 aa16.3■□□□□ 0.2
LRRTM1-205ENST00000417012 A0A1W2PP64 1363 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms