RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
GTF3AP1-201ENST00000416942 NKX2-3Q8TAU0 364 aa12.25□□□□□ -0.45
GTF3AP1-201ENST00000416942 THAP11Q96EK4 314 aa12.25□□□□□ -0.45
GTF3AP1-201ENST00000416942 PCDHGC3Q9UN70 934 aa12.25□□□□□ -0.45
GTF3AP1-201ENST00000416942 Q3C1V9 767 aa12.24□□□□□ -0.45
GTF3AP1-201ENST00000416942 RNF19BQ6ZMZ0 732 aa12.24□□□□□ -0.45
GTF3AP1-201ENST00000416942 SALL2Q9Y467 1007 aaPredicted RBP12.24□□□□□ -0.45
GTF3AP1-201ENST00000416942 SHROOM4Q9ULL8 1493 aa12.23□□□□□ -0.45
GTF3AP1-201ENST00000416942 FMNL1O95466 1100 aaPredicted RBP12.23□□□□□ -0.45
GTF3AP1-201ENST00000416942 BRICD5Q6PL45 260 aa12.23□□□□□ -0.45
GTF3AP1-201ENST00000416942 POLR3EQ9NVU0 708 aa12.23□□□□□ -0.45
GTF3AP1-201ENST00000416942 LIMD1Q9UGP4 676 aa12.23□□□□□ -0.45
GTF3AP1-201ENST00000416942 MYO15BQ96JP2 1530 aa12.22□□□□□ -0.45
GTF3AP1-201ENST00000416942 CLK2P49760 499 aaKnown RBP12.22□□□□□ -0.45
GTF3AP1-201ENST00000416942 SPSB2Q99619 263 aa12.22□□□□□ -0.45
GTF3AP1-201ENST00000416942 ADH1BP00325 375 aa12.21□□□□□ -0.45
GTF3AP1-201ENST00000416942 SKIV2LQ15477 1246 aaKnown RBP12.21□□□□□ -0.45
GTF3AP1-201ENST00000416942 PCDHB15Q9Y5E8 787 aa12.21□□□□□ -0.45
GTF3AP1-201ENST00000416942 SYMPKQ92797 1274 aaKnown RBP12.2□□□□□ -0.46
GTF3AP1-201ENST00000416942 CSPP1Q1MSJ5 1256 aa12.19□□□□□ -0.46
GTF3AP1-201ENST00000416942 CUX2O14529 1486 aa12.19□□□□□ -0.46
GTF3AP1-201ENST00000416942 C6orf229H3BNL8 230 aa12.18□□□□□ -0.46
GTF3AP1-201ENST00000416942 TUSC1Q2TAM9 212 aa12.18□□□□□ -0.46
GTF3AP1-201ENST00000416942 GOPCQ9HD26 462 aa12.18□□□□□ -0.46
GTF3AP1-201ENST00000416942 USB1Q9BQ65 265 aaKnown RBP12.17□□□□□ -0.46
GTF3AP1-201ENST00000416942 MTMR2Q13614 643 aa12.16□□□□□ -0.46
GTF3AP1-201ENST00000416942 FAM160A2Q8N612 972 aaPredicted RBP12.16□□□□□ -0.46
GTF3AP1-201ENST00000416942 PROCA1Q8NCQ7 364 aaPredicted RBP12.16□□□□□ -0.46
GTF3AP1-201ENST00000416942 HRCP23327 699 aa12.15□□□□□ -0.46
GTF3AP1-201ENST00000416942 PRPF38BQ5VTL8 546 aaKnown RBP12.15□□□□□ -0.46
GTF3AP1-201ENST00000416942 RETREG3Q86VR2 466 aa12.15□□□□□ -0.46
GTF3AP1-201ENST00000416942 SLC6A16Q9GZN6 736 aa12.15□□□□□ -0.46
GTF3AP1-201ENST00000416942 ZBTB3Q9H5J0 574 aa12.15□□□□□ -0.46
GTF3AP1-201ENST00000416942 QPCTQ16769 361 aa12.14□□□□□ -0.47
GTF3AP1-201ENST00000416942 MSS51Q4VC12 460 aa12.14□□□□□ -0.47
GTF3AP1-201ENST00000416942 CABLES1Q8TDN4 633 aa12.14□□□□□ -0.47
GTF3AP1-201ENST00000416942 ATP1B4Q9UN42 357 aaPredicted RBP12.14□□□□□ -0.47
GTF3AP1-201ENST00000416942 A0A0G2JS52 829 aa12.13□□□□□ -0.47
GTF3AP1-201ENST00000416942 SPDYE5A6NIY4 337 aa12.13□□□□□ -0.47
GTF3AP1-201ENST00000416942 S1PR4O95977 384 aa12.13□□□□□ -0.47
GTF3AP1-201ENST00000416942 PCMTD1Q96MG8 357 aaPredicted RBP12.13□□□□□ -0.47
GTF3AP1-201ENST00000416942 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.13□□□□□ -0.47
GTF3AP1-201ENST00000416942 LILRB3O75022 631 aa12.12□□□□□ -0.47
GTF3AP1-201ENST00000416942 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
GTF3AP1-201ENST00000416942 GGCXP38435 758 aa12.11□□□□□ -0.47
GTF3AP1-201ENST00000416942 PRDM9Q9NQV7 894 aa12.11□□□□□ -0.47
GTF3AP1-201ENST00000416942 SCRIBQ14160 1630 aa12.11□□□□□ -0.47
GTF3AP1-201ENST00000416942 NUTM2BA6NNL0 878 aaPredicted RBP12.1□□□□□ -0.47
GTF3AP1-201ENST00000416942 NUTM2EB1AL46 878 aaPredicted RBP12.1□□□□□ -0.47
GTF3AP1-201ENST00000416942 NUTM2DQ5VT03 806 aaPredicted RBP12.1□□□□□ -0.47
GTF3AP1-201ENST00000416942 NUTM2AQ8IVF1 878 aaPredicted RBP12.1□□□□□ -0.47
GTF3AP1-201ENST00000416942 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.1□□□□□ -0.47
GTF3AP1-201ENST00000416942 ERCC6Q03468 1493 aa12.09□□□□□ -0.47
GTF3AP1-201ENST00000416942 PRR7Q8TB68 274 aa12.09□□□□□ -0.47
GTF3AP1-201ENST00000416942 RTL5Q5HYW3 569 aaPredicted RBP12.08□□□□□ -0.48
GTF3AP1-201ENST00000416942 CFAP99D6REC4 459 aa12.07□□□□□ -0.48
GTF3AP1-201ENST00000416942 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
GTF3AP1-201ENST00000416942 MMP16P51512 607 aa12.07□□□□□ -0.48
GTF3AP1-201ENST00000416942 FBXO31Q5XUX0 539 aaPredicted RBP12.07□□□□□ -0.48
GTF3AP1-201ENST00000416942 PPEF1O14829 653 aaPredicted RBP12.05□□□□□ -0.48
GTF3AP1-201ENST00000416942 DXOO77932 396 aaKnown RBP12.05□□□□□ -0.48
GTF3AP1-201ENST00000416942 JUNDP17535 347 aa12.05□□□□□ -0.48
GTF3AP1-201ENST00000416942 TMEM132AQ24JP5 1023 aa12.05□□□□□ -0.48
GTF3AP1-201ENST00000416942 PPP2R2DQ66LE6 453 aa12.05□□□□□ -0.48
GTF3AP1-201ENST00000416942 DESI1Q6ICB0 168 aa12.03□□□□□ -0.48
GTF3AP1-201ENST00000416942 ANKLE1Q8NAG6 615 aa12.03□□□□□ -0.48
GTF3AP1-201ENST00000416942 FCF1Q9Y324 198 aaKnown RBP12.02□□□□□ -0.49
GTF3AP1-201ENST00000416942 TSC1Q92574 1164 aa12.01□□□□□ -0.49
GTF3AP1-201ENST00000416942 RFC5P40937 340 aa12□□□□□ -0.49
GTF3AP1-201ENST00000416942 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
GTF3AP1-201ENST00000416942 PTPRNQ16849 979 aa11.98□□□□□ -0.49
GTF3AP1-201ENST00000416942 LYPD8Q6UX82 237 aa11.97□□□□□ -0.49
GTF3AP1-201ENST00000416942 NUDT12Q9BQG2 462 aa11.97□□□□□ -0.49
GTF3AP1-201ENST00000416942 PLA2G2CQ5R387 149 aa11.96□□□□□ -0.49
GTF3AP1-201ENST00000416942 PER1O15534 1290 aaPredicted RBP11.95□□□□□ -0.5
GTF3AP1-201ENST00000416942 AP1G2O75843 785 aa11.95□□□□□ -0.5
GTF3AP1-201ENST00000416942 CTDSPL2Q05D32 466 aa11.95□□□□□ -0.5
GTF3AP1-201ENST00000416942 CCDC24Q8N4L8 307 aa11.95□□□□□ -0.5
GTF3AP1-201ENST00000416942 CCNYL3P0C7X3 344 aa11.94□□□□□ -0.5
GTF3AP1-201ENST00000416942 RGS20O76081 388 aa11.92□□□□□ -0.5
GTF3AP1-201ENST00000416942 TMEM259Q4ZIN3 620 aa11.92□□□□□ -0.5
GTF3AP1-201ENST00000416942 EMID1Q96A84 441 aaPredicted RBP11.92□□□□□ -0.5
GTF3AP1-201ENST00000416942 EVA1BQ9NVM1 165 aa11.92□□□□□ -0.5
GTF3AP1-201ENST00000416942 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
GTF3AP1-201ENST00000416942 PRKD2Q9BZL6 878 aa11.91□□□□□ -0.5
GTF3AP1-201ENST00000416942 SLC19A1P41440 591 aa11.9□□□□□ -0.5
GTF3AP1-201ENST00000416942 F12P00748 615 aaPredicted RBP11.89□□□□□ -0.51
GTF3AP1-201ENST00000416942 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
GTF3AP1-201ENST00000416942 KCNH2Q12809 1159 aa11.89□□□□□ -0.51
GTF3AP1-201ENST00000416942 PTCRAQ6ISU1 281 aaPredicted RBP11.89□□□□□ -0.51
GTF3AP1-201ENST00000416942 ZBTB24O43167 697 aaPredicted RBP11.88□□□□□ -0.51
GTF3AP1-201ENST00000416942 CTHP32929 405 aa11.88□□□□□ -0.51
GTF3AP1-201ENST00000416942 LRRN4Q8WUT4 740 aa11.88□□□□□ -0.51
GTF3AP1-201ENST00000416942 V9GY48 417 aaPredicted RBP11.88□□□□□ -0.51
GTF3AP1-201ENST00000416942 ZCCHC6Q5VYS8 1495 aaKnown RBP11.88□□□□□ -0.51
GTF3AP1-201ENST00000416942 RPIAP49247 311 aa11.87□□□□□ -0.51
GTF3AP1-201ENST00000416942 MAP10Q9P2G4 905 aa11.87□□□□□ -0.51
GTF3AP1-201ENST00000416942 DCAF1Q9Y4B6 1507 aa11.86□□□□□ -0.51
GTF3AP1-201ENST00000416942 BANK1Q8NDB2 785 aa11.85□□□□□ -0.51
GTF3AP1-201ENST00000416942 UNC93B1Q9H1C4 597 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms