RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 TECPR2O15040 1411 aa21.44■■□□□ 1.02
PAF1-202ENST00000416728 ADAMTS2O95450 1211 aa21.44■■□□□ 1.02
PAF1-202ENST00000416728 CDC42BPGQ6DT37 1551 aa21.44■■□□□ 1.02
PAF1-202ENST00000416728 CDK12Q9NYV4 1490 aaPredicted RBP21.43■■□□□ 1.02
PAF1-202ENST00000416728 ESCO1Q5FWF5 840 aa21.43■■□□□ 1.02
PAF1-202ENST00000416728 PIK3C2GO75747 1445 aa21.42■■□□□ 1.02
PAF1-202ENST00000416728 TMEM132EQ6IEE7 984 aa21.42■■□□□ 1.02
PAF1-202ENST00000416728 ABCC11Q96J66 1382 aa21.42■■□□□ 1.02
PAF1-202ENST00000416728 NPHP3Q7Z494 1330 aa21.41■■□□□ 1.02
PAF1-202ENST00000416728 WAPLQ7Z5K2 1190 aa21.41■■□□□ 1.02
PAF1-202ENST00000416728 NGLY1Q96IV0 654 aa21.41■■□□□ 1.02
PAF1-202ENST00000416728 UPF1Q92900 1129 aaKnown RBP eCLIP21.4■■□□□ 1.02
PAF1-202ENST00000416728 QTRT2Q9H974 415 aaKnown RBP21.4■■□□□ 1.02
PAF1-202ENST00000416728 IFT172Q9UG01 1749 aa21.39■■□□□ 1.01
PAF1-202ENST00000416728 RBM6P78332 1123 aaKnown RBP21.38■■□□□ 1.01
PAF1-202ENST00000416728 YTHDC2Q9H6S0 1430 aaKnown RBP21.37■■□□□ 1.01
PAF1-202ENST00000416728 PLEKHH1Q9ULM0 1364 aa21.37■■□□□ 1.01
PAF1-202ENST00000416728 NUTM2FA1L443 756 aa21.36■■□□□ 1.01
PAF1-202ENST00000416728 FOXO3O43524 673 aa21.36■■□□□ 1.01
PAF1-202ENST00000416728 XPCQ01831 940 aaPredicted RBP21.35■■□□□ 1.01
PAF1-202ENST00000416728 C14orf93Q9H972 538 aaKnown RBP21.35■■□□□ 1.01
PAF1-202ENST00000416728 PXDNQ92626 1479 aa21.35■■□□□ 1.01
PAF1-202ENST00000416728 RGS12O14924 1447 aa21.34■■□□□ 1.01
PAF1-202ENST00000416728 USP21Q9UK80 565 aa21.34■■□□□ 1.01
PAF1-202ENST00000416728 KNDC1Q76NI1 1749 aa21.34■■□□□ 1.01
PAF1-202ENST00000416728 RAB3GAP2Q9H2M9 1393 aa21.33■■□□□ 1.01
PAF1-202ENST00000416728 MYOM2P54296 1465 aa21.32■■□□□ 1
PAF1-202ENST00000416728 CFAP70Q5T0N1 1121 aa21.32■■□□□ 1
PAF1-202ENST00000416728 SIRT1Q96EB6 747 aa21.32■■□□□ 1
PAF1-202ENST00000416728 COL22A1Q8NFW1 1626 aaPredicted RBP21.32■■□□□ 1
PAF1-202ENST00000416728 NRXN1Q9ULB1 1477 aa21.31■■□□□ 1
PAF1-202ENST00000416728 FNBP4Q8N3X1 1017 aaPredicted RBP21.31■■□□□ 1
PAF1-202ENST00000416728 TRPC5Q9UL62 973 aaPredicted RBP21.31■■□□□ 1
PAF1-202ENST00000416728 DHX57Q6P158 1386 aaKnown RBP21.31■■□□□ 1
PAF1-202ENST00000416728 FMN2Q9NZ56 1722 aa21.26■□□□□ 0.99
PAF1-202ENST00000416728 PRAM1Q96QH2 718 aa21.25■□□□□ 0.99
PAF1-202ENST00000416728 SPATA31A3Q5VYP0 1347 aa21.25■□□□□ 0.99
PAF1-202ENST00000416728 SAFB2Q14151 953 aaKnown RBP eCLIP21.24■□□□□ 0.99
PAF1-202ENST00000416728 ATRNO75882 1429 aa21.24■□□□□ 0.99
PAF1-202ENST00000416728 KRT28Q7Z3Y7 464 aa21.23■□□□□ 0.99
PAF1-202ENST00000416728 KIF1AQ12756 1690 aa21.23■□□□□ 0.99
PAF1-202ENST00000416728 POGKQ9P215 609 aa21.23■□□□□ 0.99
PAF1-202ENST00000416728 PHF8Q9UPP1 1060 aa21.23■□□□□ 0.99
PAF1-202ENST00000416728 BCL9LQ86UU0 1499 aa21.22■□□□□ 0.99
PAF1-202ENST00000416728 ATAD2Q6PL18 1390 aa21.21■□□□□ 0.99
PAF1-202ENST00000416728 PSME1Q06323 249 aa21.2■□□□□ 0.98
PAF1-202ENST00000416728 DLC1Q96QB1 1528 aa21.2■□□□□ 0.98
PAF1-202ENST00000416728 KDM2AQ9Y2K7 1162 aa21.18■□□□□ 0.98
PAF1-202ENST00000416728 TNS3Q68CZ2 1445 aa21.17■□□□□ 0.98
PAF1-202ENST00000416728 HAP1P54257 671 aaPredicted RBP21.17■□□□□ 0.98
PAF1-202ENST00000416728 DCAF11Q8TEB1 546 aa21.17■□□□□ 0.98
PAF1-202ENST00000416728 TRAK1Q9UPV9 953 aa21.17■□□□□ 0.98
PAF1-202ENST00000416728 ADGRB1O14514 1584 aa21.17■□□□□ 0.98
PAF1-202ENST00000416728 GJD4Q96KN9 370 aaPredicted RBP21.16■□□□□ 0.98
PAF1-202ENST00000416728 ANKARQ7Z5J8 1434 aa21.16■□□□□ 0.98
PAF1-202ENST00000416728 HRCP23327 699 aa21.15■□□□□ 0.98
PAF1-202ENST00000416728 UNC5CLQ8IV45 518 aa21.15■□□□□ 0.98
PAF1-202ENST00000416728 STAC3Q96MF2 364 aa21.15■□□□□ 0.98
PAF1-202ENST00000416728 MARF1Q9Y4F3 1742 aaKnown RBP21.14■□□□□ 0.98
PAF1-202ENST00000416728 SBNO1A3KN83 1393 aa21.14■□□□□ 0.98
PAF1-202ENST00000416728 LMOD2Q6P5Q4 547 aa21.14■□□□□ 0.98
PAF1-202ENST00000416728 SLIT2O94813 1529 aa21.13■□□□□ 0.97
PAF1-202ENST00000416728 PMFBP1Q8TBY8 1022 aa21.13■□□□□ 0.97
PAF1-202ENST00000416728 HIRIP3Q9BW71 556 aaPredicted RBP21.13■□□□□ 0.97
PAF1-202ENST00000416728 ARHGEF10O15013 1369 aa21.13■□□□□ 0.97
PAF1-202ENST00000416728 ADGRB2O60241 1585 aa21.12■□□□□ 0.97
PAF1-202ENST00000416728 PLEKHG5O94827 1062 aa21.12■□□□□ 0.97
PAF1-202ENST00000416728 CABLES1Q8TDN4 633 aa21.12■□□□□ 0.97
PAF1-202ENST00000416728 USP32Q8NFA0 1604 aa21.12■□□□□ 0.97
PAF1-202ENST00000416728 MINK1Q8N4C8 1332 aaPredicted RBP21.12■□□□□ 0.97
PAF1-202ENST00000416728 EIF3AQ14152 1382 aaKnown RBP21.12■□□□□ 0.97
PAF1-202ENST00000416728 RGPD8O14715 1765 aaPredicted RBP21.11■□□□□ 0.97
PAF1-202ENST00000416728 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.09■□□□□ 0.97
PAF1-202ENST00000416728 RALGAPBQ86X10 1494 aa21.09■□□□□ 0.97
PAF1-202ENST00000416728 GPRASP1Q5JY77 1395 aa21.07■□□□□ 0.96
PAF1-202ENST00000416728 WASLO00401 505 aaPredicted RBP21.07■□□□□ 0.96
PAF1-202ENST00000416728 PRR36Q9H6K5 1346 aa21.07■□□□□ 0.96
PAF1-202ENST00000416728 TULP4Q9NRJ4 1543 aa21.06■□□□□ 0.96
PAF1-202ENST00000416728 GLI3P10071 1580 aa21.06■□□□□ 0.96
PAF1-202ENST00000416728 VPS72Q15906 364 aa21.05■□□□□ 0.96
PAF1-202ENST00000416728 CCDC125Q86Z20 511 aa21.05■□□□□ 0.96
PAF1-202ENST00000416728 CCDC9Q9Y3X0 531 aaKnown RBP21.04■□□□□ 0.96
PAF1-202ENST00000416728 NGDNQ8NEJ9 315 aaKnown RBP21.02■□□□□ 0.96
PAF1-202ENST00000416728 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
PAF1-202ENST00000416728 SEPT12Q8IYM1 358 aa21■□□□□ 0.95
PAF1-202ENST00000416728 ABCA3Q99758 1704 aa21■□□□□ 0.95
PAF1-202ENST00000416728 TRPM3Q9HCF6 1732 aaPredicted RBP20.99■□□□□ 0.95
PAF1-202ENST00000416728 NWD2Q9ULI1 1742 aa20.99■□□□□ 0.95
PAF1-202ENST00000416728 PLCH1Q4KWH8 1693 aa20.98■□□□□ 0.95
PAF1-202ENST00000416728 PAK3O75914 559 aaPredicted RBP20.98■□□□□ 0.95
PAF1-202ENST00000416728 NUDT16Q96DE0 195 aaKnown RBP20.97■□□□□ 0.95
PAF1-202ENST00000416728 ZRANB1Q9UGI0 708 aa20.97■□□□□ 0.95
PAF1-202ENST00000416728 BLMP54132 1417 aaPredicted RBP20.97■□□□□ 0.95
PAF1-202ENST00000416728 ARHGEF28Q8N1W1 1705 aaKnown RBP20.97■□□□□ 0.95
PAF1-202ENST00000416728 BTG4Q9NY30 223 aa20.97■□□□□ 0.95
PAF1-202ENST00000416728 EP400Q96L91 3159 aa20.96■□□□□ 0.95
PAF1-202ENST00000416728 ATP7BP35670 1465 aa20.96■□□□□ 0.95
PAF1-202ENST00000416728 ONECUT3O60422 494 aaPredicted RBP20.96■□□□□ 0.95
PAF1-202ENST00000416728 ALS2Q96Q42 1657 aa20.96■□□□□ 0.95
PAF1-202ENST00000416728 A0A0G2JS52 829 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms