RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 TSPOAP1O95153 1857 aa18.61■□□□□ 0.57
NCKIPSD-204ENST00000416649 MAGI2Q86UL8 1455 aa18.61■□□□□ 0.57
NCKIPSD-204ENST00000416649 DISP3Q9P2K9 1392 aa18.61■□□□□ 0.57
NCKIPSD-204ENST00000416649 RIMBP3CA6NJZ7 1639 aa18.61■□□□□ 0.57
NCKIPSD-204ENST00000416649 RIMBP3BA6NNM3 1639 aa18.61■□□□□ 0.57
NCKIPSD-204ENST00000416649 RIMBP3Q9UFD9 1639 aa18.61■□□□□ 0.57
NCKIPSD-204ENST00000416649 TNNT2P45379 298 aaPredicted RBP18.61■□□□□ 0.57
NCKIPSD-204ENST00000416649 ADGRF5Q8IZF2 1346 aa18.61■□□□□ 0.57
NCKIPSD-204ENST00000416649 YEATS2Q9ULM3 1422 aa18.6■□□□□ 0.57
NCKIPSD-204ENST00000416649 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
NCKIPSD-204ENST00000416649 PPP2R1AP30153 589 aa18.6■□□□□ 0.57
NCKIPSD-204ENST00000416649 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
NCKIPSD-204ENST00000416649 NLRP1Q9C000 1473 aa18.59■□□□□ 0.57
NCKIPSD-204ENST00000416649 FAM13BQ9NYF5 915 aa18.58■□□□□ 0.57
NCKIPSD-204ENST00000416649 GAS2L3Q86XJ1 694 aa18.58■□□□□ 0.56
NCKIPSD-204ENST00000416649 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.56
NCKIPSD-204ENST00000416649 ZNF521Q96K83 1311 aa18.58■□□□□ 0.56
NCKIPSD-204ENST00000416649 DDX11L8A8MPP1 907 aa18.57■□□□□ 0.56
NCKIPSD-204ENST00000416649 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
NCKIPSD-204ENST00000416649 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
NCKIPSD-204ENST00000416649 TMF1P82094 1093 aa18.56■□□□□ 0.56
NCKIPSD-204ENST00000416649 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
NCKIPSD-204ENST00000416649 TESK2Q96S53 571 aa18.56■□□□□ 0.56
NCKIPSD-204ENST00000416649 C22orf23Q9BZE7 217 aa18.56■□□□□ 0.56
NCKIPSD-204ENST00000416649 HSCBQ8IWL3 235 aa18.55■□□□□ 0.56
NCKIPSD-204ENST00000416649 CENPJQ9HC77 1338 aaPredicted RBP18.55■□□□□ 0.56
NCKIPSD-204ENST00000416649 BCL2L13Q9BXK5 485 aa18.55■□□□□ 0.56
NCKIPSD-204ENST00000416649 CLTCL1P53675 1640 aa18.55■□□□□ 0.56
NCKIPSD-204ENST00000416649 INSRP06213 1382 aa18.54■□□□□ 0.56
NCKIPSD-204ENST00000416649 FBXO31Q5XUX0 539 aaPredicted RBP18.54■□□□□ 0.56
NCKIPSD-204ENST00000416649 NKTRP30414 1462 aaKnown RBP18.54■□□□□ 0.56
NCKIPSD-204ENST00000416649 PRDM15P57071 1507 aaPredicted RBP18.54■□□□□ 0.56
NCKIPSD-204ENST00000416649 PCDHB15Q9Y5E8 787 aa18.53■□□□□ 0.56
NCKIPSD-204ENST00000416649 FOXD4L1Q9NU39 408 aa18.53■□□□□ 0.56
NCKIPSD-204ENST00000416649 SAFB2Q14151 953 aaKnown RBP eCLIP18.53■□□□□ 0.56
NCKIPSD-204ENST00000416649 TRAK1Q9UPV9 953 aa18.53■□□□□ 0.56
NCKIPSD-204ENST00000416649 TNNQ9UQP3 1299 aa18.53■□□□□ 0.56
NCKIPSD-204ENST00000416649 PDE3AQ14432 1141 aa18.52■□□□□ 0.56
NCKIPSD-204ENST00000416649 VIRMAQ69YN4 1812 aaKnown RBP18.52■□□□□ 0.56
NCKIPSD-204ENST00000416649 E9PSI1 815 aa18.52■□□□□ 0.55
NCKIPSD-204ENST00000416649 MSNP26038 577 aaKnown RBP18.52■□□□□ 0.55
NCKIPSD-204ENST00000416649 TRPM1Q7Z4N2 1603 aa18.52■□□□□ 0.55
NCKIPSD-204ENST00000416649 NPATQ14207 1427 aa18.51■□□□□ 0.55
NCKIPSD-204ENST00000416649 CEP152O94986 1710 aa18.51■□□□□ 0.55
NCKIPSD-204ENST00000416649 CALD1Q05682 793 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-204ENST00000416649 PMFBP1Q8TBY8 1022 aa18.51■□□□□ 0.55
NCKIPSD-204ENST00000416649 MROH1Q8NDA8 1641 aa18.51■□□□□ 0.55
NCKIPSD-204ENST00000416649 R3HCC1Q9Y3T6 440 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-204ENST00000416649 ANP32BQ92688 251 aaKnown RBP18.5■□□□□ 0.55
NCKIPSD-204ENST00000416649 RRP7AQ9Y3A4 280 aaKnown RBP18.5■□□□□ 0.55
NCKIPSD-204ENST00000416649 PTPRTO14522 1441 aa18.5■□□□□ 0.55
NCKIPSD-204ENST00000416649 SPHKAPQ2M3C7 1700 aa18.5■□□□□ 0.55
NCKIPSD-204ENST00000416649 FRMPD1Q5SYB0 1578 aa18.49■□□□□ 0.55
NCKIPSD-204ENST00000416649 ABCA6Q8N139 1617 aa18.49■□□□□ 0.55
NCKIPSD-204ENST00000416649 TRPM2O94759 1503 aa18.49■□□□□ 0.55
NCKIPSD-204ENST00000416649 HECW2Q9P2P5 1572 aa18.49■□□□□ 0.55
NCKIPSD-204ENST00000416649 TRMT2AQ8IZ69 625 aaKnown RBP18.49■□□□□ 0.55
NCKIPSD-204ENST00000416649 MLH3Q9UHC1 1453 aa18.49■□□□□ 0.55
NCKIPSD-204ENST00000416649 TET3O43151 1660 aa18.48■□□□□ 0.55
NCKIPSD-204ENST00000416649 TNPO1Q92973 898 aaKnown RBP18.48■□□□□ 0.55
NCKIPSD-204ENST00000416649 PRDM4Q9UKN5 801 aa18.48■□□□□ 0.55
NCKIPSD-204ENST00000416649 PPRC1Q5VV67 1664 aaKnown RBP18.47■□□□□ 0.55
NCKIPSD-204ENST00000416649 ISY1Q9ULR0 285 aaKnown RBP18.47■□□□□ 0.55
NCKIPSD-204ENST00000416649 DEPDC5O75140 1603 aa18.47■□□□□ 0.55
NCKIPSD-204ENST00000416649 NOS1P29475 1434 aa18.47■□□□□ 0.55
NCKIPSD-204ENST00000416649 COL17A1Q9UMD9 1497 aaPredicted RBP18.47■□□□□ 0.55
NCKIPSD-204ENST00000416649 IDI1Q13907 227 aa18.47■□□□□ 0.55
NCKIPSD-204ENST00000416649 RLBP1P12271 317 aa18.46■□□□□ 0.55
NCKIPSD-204ENST00000416649 NASPP49321 788 aaPredicted RBP18.46■□□□□ 0.55
NCKIPSD-204ENST00000416649 RIPK4P57078 832 aa18.46■□□□□ 0.55
NCKIPSD-204ENST00000416649 STK26Q9P289 416 aa18.46■□□□□ 0.55
NCKIPSD-204ENST00000416649 NEO1Q92859 1461 aa18.46■□□□□ 0.55
NCKIPSD-204ENST00000416649 ZSCAN30Q86W11 494 aa18.46■□□□□ 0.55
NCKIPSD-204ENST00000416649 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
NCKIPSD-204ENST00000416649 GBP4Q96PP9 640 aa18.45■□□□□ 0.54
NCKIPSD-204ENST00000416649 RWDD1Q9H446 243 aaPredicted RBP18.45■□□□□ 0.54
NCKIPSD-204ENST00000416649 PRDM10Q9NQV6 1147 aa18.45■□□□□ 0.54
NCKIPSD-204ENST00000416649 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
NCKIPSD-204ENST00000416649 GPRASP1Q5JY77 1395 aa18.44■□□□□ 0.54
NCKIPSD-204ENST00000416649 EFCAB6Q5THR3 1501 aa18.44■□□□□ 0.54
NCKIPSD-204ENST00000416649 OFD1O75665 1012 aa18.43■□□□□ 0.54
NCKIPSD-204ENST00000416649 CCDC173Q0VFZ6 552 aa18.43■□□□□ 0.54
NCKIPSD-204ENST00000416649 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-204ENST00000416649 VWDEQ8N2E2 1590 aa18.43■□□□□ 0.54
NCKIPSD-204ENST00000416649 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
NCKIPSD-204ENST00000416649 CFAP74Q9C0B2 1584 aa18.42■□□□□ 0.54
NCKIPSD-204ENST00000416649 AMER1Q5JTC6 1135 aaPredicted RBP18.42■□□□□ 0.54
NCKIPSD-204ENST00000416649 ZNF692Q9BU19 519 aaPredicted RBP18.42■□□□□ 0.54
NCKIPSD-204ENST00000416649 ZBTB7CA1YPR0 619 aa18.41■□□□□ 0.54
NCKIPSD-204ENST00000416649 NCLP19338 710 aaKnown RBP18.41■□□□□ 0.54
NCKIPSD-204ENST00000416649 XPCQ01831 940 aaPredicted RBP18.4■□□□□ 0.54
NCKIPSD-204ENST00000416649 DIP2CQ9Y2E4 1556 aa18.4■□□□□ 0.54
NCKIPSD-204ENST00000416649 RNF17Q9BXT8 1623 aaKnown RBP18.39■□□□□ 0.54
NCKIPSD-204ENST00000416649 MADDQ8WXG6 1647 aa18.39■□□□□ 0.53
NCKIPSD-204ENST00000416649 EIF2AK4Q9P2K8 1649 aaKnown RBP18.39■□□□□ 0.53
NCKIPSD-204ENST00000416649 UQCRHLA0A096LP55 91 aa18.39■□□□□ 0.53
NCKIPSD-204ENST00000416649 UQCRHP07919 91 aa18.39■□□□□ 0.53
NCKIPSD-204ENST00000416649 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
NCKIPSD-204ENST00000416649 SKOR2Q2VWA4 1001 aaPredicted RBP18.38■□□□□ 0.53
NCKIPSD-204ENST00000416649 DDX49Q9Y6V7 483 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms