RNA–Protein interactions for RNA: ENST00000416615.5

AP000552.1-203, humanhuman

TSL 5 BASIC

Gene AP000552.1, Length 1,930 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000552.1-203ENST00000416615 PTCH1Q13635 1447 aa20.44■□□□□ 0.86
AP000552.1-203ENST00000416615 FAM135BQ49AJ0 1406 aa20.43■□□□□ 0.86
AP000552.1-203ENST00000416615 TMF1P82094 1093 aa20.43■□□□□ 0.86
AP000552.1-203ENST00000416615 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.42■□□□□ 0.86
AP000552.1-203ENST00000416615 TULP4Q9NRJ4 1543 aa20.42■□□□□ 0.86
AP000552.1-203ENST00000416615 CCDC7Q96M83 1385 aa20.42■□□□□ 0.86
AP000552.1-203ENST00000416615 NWD1Q149M9 1564 aa20.42■□□□□ 0.86
AP000552.1-203ENST00000416615 CABP2Q9NPB3 220 aa20.41■□□□□ 0.86
AP000552.1-203ENST00000416615 NUTM2FA1L443 756 aa20.4■□□□□ 0.86
AP000552.1-203ENST00000416615 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
AP000552.1-203ENST00000416615 PROSER2Q86WR7 435 aaPredicted RBP20.4■□□□□ 0.86
AP000552.1-203ENST00000416615 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
AP000552.1-203ENST00000416615 SBNO2Q9Y2G9 1366 aa20.38■□□□□ 0.85
AP000552.1-203ENST00000416615 SIRT1Q96EB6 747 aa20.38■□□□□ 0.85
AP000552.1-203ENST00000416615 SRPK2P78362 688 aaKnown RBP20.37■□□□□ 0.85
AP000552.1-203ENST00000416615 C14orf37Q86TY3 774 aa20.37■□□□□ 0.85
AP000552.1-203ENST00000416615 CDK19Q9BWU1 502 aa20.37■□□□□ 0.85
AP000552.1-203ENST00000416615 EVC2Q86UK5 1308 aa20.36■□□□□ 0.85
AP000552.1-203ENST00000416615 TMEM94Q12767 1356 aa20.35■□□□□ 0.85
AP000552.1-203ENST00000416615 NALCNQ8IZF0 1738 aa20.35■□□□□ 0.85
AP000552.1-203ENST00000416615 NKTRP30414 1462 aaKnown RBP20.34■□□□□ 0.85
AP000552.1-203ENST00000416615 WASLO00401 505 aaPredicted RBP20.33■□□□□ 0.85
AP000552.1-203ENST00000416615 TMC1Q8TDI8 760 aa20.31■□□□□ 0.84
AP000552.1-203ENST00000416615 LRRC7Q96NW7 1537 aa20.3■□□□□ 0.84
AP000552.1-203ENST00000416615 PRR36Q9H6K5 1346 aa20.29■□□□□ 0.84
AP000552.1-203ENST00000416615 ADGRL3Q9HAR2 1447 aa20.29■□□□□ 0.84
AP000552.1-203ENST00000416615 ADGRB2O60241 1585 aa20.29■□□□□ 0.84
AP000552.1-203ENST00000416615 SLC12A5Q9H2X9 1139 aa20.29■□□□□ 0.84
AP000552.1-203ENST00000416615 CDCA8Q53HL2 280 aa20.28■□□□□ 0.84
AP000552.1-203ENST00000416615 MYOM1P52179 1685 aa20.28■□□□□ 0.84
AP000552.1-203ENST00000416615 CNGB1Q14028 1251 aaPredicted RBP20.27■□□□□ 0.84
AP000552.1-203ENST00000416615 XIRP1Q702N8 1843 aaKnown RBP20.27■□□□□ 0.84
AP000552.1-203ENST00000416615 NUDT16Q96DE0 195 aaKnown RBP20.25■□□□□ 0.83
AP000552.1-203ENST00000416615 SLC24A1O60721 1099 aa20.25■□□□□ 0.83
AP000552.1-203ENST00000416615 DIEXFQ68CQ4 756 aaKnown RBP20.25■□□□□ 0.83
AP000552.1-203ENST00000416615 ATP7BP35670 1465 aa20.24■□□□□ 0.83
AP000552.1-203ENST00000416615 CABP1Q9NZU7 370 aa20.24■□□□□ 0.83
AP000552.1-203ENST00000416615 PANK3Q9H999 370 aa20.23■□□□□ 0.83
AP000552.1-203ENST00000416615 LTBP4Q8N2S1 1624 aa20.23■□□□□ 0.83
AP000552.1-203ENST00000416615 USP32Q8NFA0 1604 aa20.23■□□□□ 0.83
AP000552.1-203ENST00000416615 C19orf44Q9H6X5 657 aa20.23■□□□□ 0.83
AP000552.1-203ENST00000416615 CDC42BPGQ6DT37 1551 aa20.22■□□□□ 0.83
AP000552.1-203ENST00000416615 RGPD8O14715 1765 aaPredicted RBP20.22■□□□□ 0.83
AP000552.1-203ENST00000416615 PPIP5K1Q6PFW1 1433 aa20.21■□□□□ 0.83
AP000552.1-203ENST00000416615 ATAD2Q6PL18 1390 aa20.21■□□□□ 0.83
AP000552.1-203ENST00000416615 FMN2Q9NZ56 1722 aa20.21■□□□□ 0.83
AP000552.1-203ENST00000416615 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
AP000552.1-203ENST00000416615 MSH6P52701 1360 aa20.19■□□□□ 0.82
AP000552.1-203ENST00000416615 ATF3P18847 181 aa20.19■□□□□ 0.82
AP000552.1-203ENST00000416615 CCDC61Q9Y6R9 512 aa20.19■□□□□ 0.82
AP000552.1-203ENST00000416615 ORAI2Q96SN7 254 aa20.17■□□□□ 0.82
AP000552.1-203ENST00000416615 CARD14Q9BXL6 1004 aa20.17■□□□□ 0.82
AP000552.1-203ENST00000416615 CD163L1Q9NR16 1453 aa20.16■□□□□ 0.82
AP000552.1-203ENST00000416615 A0A1W2PP64 1363 aa20.16■□□□□ 0.82
AP000552.1-203ENST00000416615 ESCO1Q5FWF5 840 aa20.16■□□□□ 0.82
AP000552.1-203ENST00000416615 PUS7Q96PZ0 661 aaKnown RBP20.16■□□□□ 0.82
AP000552.1-203ENST00000416615 NCOA3Q9Y6Q9 1424 aa20.15■□□□□ 0.82
AP000552.1-203ENST00000416615 TOPAZ1Q8N9V7 1692 aa20.15■□□□□ 0.82
AP000552.1-203ENST00000416615 MST1RQ04912 1400 aa20.14■□□□□ 0.81
AP000552.1-203ENST00000416615 ANKARQ7Z5J8 1434 aa20.13■□□□□ 0.81
AP000552.1-203ENST00000416615 C1orf167Q5SNV9 1468 aa20.13■□□□□ 0.81
AP000552.1-203ENST00000416615 CADPS2Q86UW7 1296 aa20.13■□□□□ 0.81
AP000552.1-203ENST00000416615 ACEP12821 1306 aa20.13■□□□□ 0.81
AP000552.1-203ENST00000416615 ANKRD36BQ8N2N9 1353 aa20.13■□□□□ 0.81
AP000552.1-203ENST00000416615 PER1O15534 1290 aaPredicted RBP20.12■□□□□ 0.81
AP000552.1-203ENST00000416615 DDX17Q92841 729 aaKnown RBP20.12■□□□□ 0.81
AP000552.1-203ENST00000416615 NSD3Q9BZ95 1437 aa20.12■□□□□ 0.81
AP000552.1-203ENST00000416615 DCCP43146 1447 aa20.11■□□□□ 0.81
AP000552.1-203ENST00000416615 XPCQ01831 940 aaPredicted RBP20.11■□□□□ 0.81
AP000552.1-203ENST00000416615 CC2D1BQ5T0F9 858 aaKnown RBP20.1■□□□□ 0.81
AP000552.1-203ENST00000416615 NGDNQ8NEJ9 315 aaKnown RBP20.1■□□□□ 0.81
AP000552.1-203ENST00000416615 PHF8Q9UPP1 1060 aa20.1■□□□□ 0.81
AP000552.1-203ENST00000416615 NINLQ9Y2I6 1382 aa20.1■□□□□ 0.81
AP000552.1-203ENST00000416615 HDGFL2Q7Z4V5 671 aaPredicted RBP20.1■□□□□ 0.81
AP000552.1-203ENST00000416615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.1■□□□□ 0.81
AP000552.1-203ENST00000416615 TERF2IPQ9NYB0 399 aa20.1■□□□□ 0.81
AP000552.1-203ENST00000416615 KTN1Q86UP2 1357 aaKnown RBP20.09■□□□□ 0.81
AP000552.1-203ENST00000416615 ITSN1Q15811 1721 aa20.09■□□□□ 0.81
AP000552.1-203ENST00000416615 PLEKHG3A1L390 1219 aa20.08■□□□□ 0.81
AP000552.1-203ENST00000416615 FOXO3O43524 673 aa20.08■□□□□ 0.81
AP000552.1-203ENST00000416615 SLAIN2Q9P270 581 aa20.08■□□□□ 0.81
AP000552.1-203ENST00000416615 KNSTRNQ9Y448 316 aa20.08■□□□□ 0.81
AP000552.1-203ENST00000416615 CPSF1Q10570 1443 aaKnown RBP20.08■□□□□ 0.8
AP000552.1-203ENST00000416615 MIER1Q8N108 512 aa20.06■□□□□ 0.8
AP000552.1-203ENST00000416615 AMER1Q5JTC6 1135 aaPredicted RBP20.04■□□□□ 0.8
AP000552.1-203ENST00000416615 BRINP3Q76B58 766 aa20.04■□□□□ 0.8
AP000552.1-203ENST00000416615 POLR3AO14802 1390 aaPredicted RBP20.04■□□□□ 0.8
AP000552.1-203ENST00000416615 AKAP12Q02952 1782 aa20.03■□□□□ 0.8
AP000552.1-203ENST00000416615 ZRANB1Q9UGI0 708 aa20.03■□□□□ 0.8
AP000552.1-203ENST00000416615 USP6P35125 1406 aa20.02■□□□□ 0.8
AP000552.1-203ENST00000416615 GGNBP2Q9H3C7 697 aa20.02■□□□□ 0.8
AP000552.1-203ENST00000416615 PAK3O75914 559 aaPredicted RBP20.02■□□□□ 0.79
AP000552.1-203ENST00000416615 NME9Q86XW9 330 aa20.02■□□□□ 0.79
AP000552.1-203ENST00000416615 MON2Q7Z3U7 1717 aa20.01■□□□□ 0.79
AP000552.1-203ENST00000416615 ANP32CO43423 234 aa20.01■□□□□ 0.79
AP000552.1-203ENST00000416615 PLEKHG5O94827 1062 aa20.01■□□□□ 0.79
AP000552.1-203ENST00000416615 PIP4K2BP78356 416 aa20.01■□□□□ 0.79
AP000552.1-203ENST00000416615 PSME1Q06323 249 aa20.01■□□□□ 0.79
AP000552.1-203ENST00000416615 NUTM2GQ5VZR2 741 aa20■□□□□ 0.79
AP000552.1-203ENST00000416615 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms