RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 PIK3C2GO75747 1445 aa19.85■□□□□ 0.77
LINC01398-201ENST00000416581 ABCC11Q96J66 1382 aa19.84■□□□□ 0.77
LINC01398-201ENST00000416581 RBM6P78332 1123 aaKnown RBP19.84■□□□□ 0.77
LINC01398-201ENST00000416581 C8orf37Q96NL8 207 aa19.84■□□□□ 0.77
LINC01398-201ENST00000416581 NGLY1Q96IV0 654 aa19.83■□□□□ 0.77
LINC01398-201ENST00000416581 ADGRF5Q8IZF2 1346 aa19.82■□□□□ 0.76
LINC01398-201ENST00000416581 KIF1AQ12756 1690 aa19.82■□□□□ 0.76
LINC01398-201ENST00000416581 ORAI2Q96SN7 254 aa19.82■□□□□ 0.76
LINC01398-201ENST00000416581 RGL3Q3MIN7 710 aa19.81■□□□□ 0.76
LINC01398-201ENST00000416581 DDX17Q92841 729 aaKnown RBP19.81■□□□□ 0.76
LINC01398-201ENST00000416581 MYOM2P54296 1465 aa19.8■□□□□ 0.76
LINC01398-201ENST00000416581 FOXD1Q16676 465 aa19.8■□□□□ 0.76
LINC01398-201ENST00000416581 UPF1Q92900 1129 aaKnown RBP eCLIP19.8■□□□□ 0.76
LINC01398-201ENST00000416581 ESCO1Q5FWF5 840 aa19.79■□□□□ 0.76
LINC01398-201ENST00000416581 SIRT1Q96EB6 747 aa19.79■□□□□ 0.76
LINC01398-201ENST00000416581 YTHDC2Q9H6S0 1430 aaKnown RBP19.78■□□□□ 0.76
LINC01398-201ENST00000416581 QTRT2Q9H974 415 aaKnown RBP19.78■□□□□ 0.76
LINC01398-201ENST00000416581 FMN2Q9NZ56 1722 aa19.78■□□□□ 0.76
LINC01398-201ENST00000416581 ADAMTS2O95450 1211 aa19.77■□□□□ 0.76
LINC01398-201ENST00000416581 TRPC5Q9UL62 973 aaPredicted RBP19.77■□□□□ 0.76
LINC01398-201ENST00000416581 PXDNQ92626 1479 aa19.77■□□□□ 0.76
LINC01398-201ENST00000416581 RGS12O14924 1447 aa19.76■□□□□ 0.75
LINC01398-201ENST00000416581 MARF1Q9Y4F3 1742 aaKnown RBP19.76■□□□□ 0.75
LINC01398-201ENST00000416581 NRXN1Q9ULB1 1477 aa19.76■□□□□ 0.75
LINC01398-201ENST00000416581 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
LINC01398-201ENST00000416581 STK26Q9P289 416 aa19.75■□□□□ 0.75
LINC01398-201ENST00000416581 USP21Q9UK80 565 aa19.75■□□□□ 0.75
LINC01398-201ENST00000416581 FNBP4Q8N3X1 1017 aaPredicted RBP19.74■□□□□ 0.75
LINC01398-201ENST00000416581 ATAD2Q6PL18 1390 aa19.72■□□□□ 0.75
LINC01398-201ENST00000416581 C14orf93Q9H972 538 aaKnown RBP19.72■□□□□ 0.75
LINC01398-201ENST00000416581 DLC1Q96QB1 1528 aa19.71■□□□□ 0.75
LINC01398-201ENST00000416581 FOXO3O43524 673 aa19.71■□□□□ 0.75
LINC01398-201ENST00000416581 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.71■□□□□ 0.75
LINC01398-201ENST00000416581 TMEM132EQ6IEE7 984 aa19.7■□□□□ 0.74
LINC01398-201ENST00000416581 WAPLQ7Z5K2 1190 aa19.7■□□□□ 0.74
LINC01398-201ENST00000416581 STAC3Q96MF2 364 aa19.7■□□□□ 0.74
LINC01398-201ENST00000416581 ATRNO75882 1429 aa19.69■□□□□ 0.74
LINC01398-201ENST00000416581 EIF3AQ14152 1382 aaKnown RBP19.69■□□□□ 0.74
LINC01398-201ENST00000416581 RAB3GAP2Q9H2M9 1393 aa19.68■□□□□ 0.74
LINC01398-201ENST00000416581 PLEKHH1Q9ULM0 1364 aa19.68■□□□□ 0.74
LINC01398-201ENST00000416581 PSME1Q06323 249 aa19.67■□□□□ 0.74
LINC01398-201ENST00000416581 ANKARQ7Z5J8 1434 aa19.67■□□□□ 0.74
LINC01398-201ENST00000416581 ADGRB2O60241 1585 aa19.66■□□□□ 0.74
LINC01398-201ENST00000416581 SPATA31A3Q5VYP0 1347 aa19.66■□□□□ 0.74
LINC01398-201ENST00000416581 TNS3Q68CZ2 1445 aa19.64■□□□□ 0.73
LINC01398-201ENST00000416581 USP32Q8NFA0 1604 aa19.64■□□□□ 0.73
LINC01398-201ENST00000416581 SBNO1A3KN83 1393 aa19.63■□□□□ 0.73
LINC01398-201ENST00000416581 ARHGEF10O15013 1369 aa19.63■□□□□ 0.73
LINC01398-201ENST00000416581 NUTM2FA1L443 756 aa19.63■□□□□ 0.73
LINC01398-201ENST00000416581 CFAP70Q5T0N1 1121 aa19.63■□□□□ 0.73
LINC01398-201ENST00000416581 PHF8Q9UPP1 1060 aa19.63■□□□□ 0.73
LINC01398-201ENST00000416581 BCL9LQ86UU0 1499 aa19.62■□□□□ 0.73
LINC01398-201ENST00000416581 HRCP23327 699 aa19.62■□□□□ 0.73
LINC01398-201ENST00000416581 XPCQ01831 940 aaPredicted RBP19.62■□□□□ 0.73
LINC01398-201ENST00000416581 KRT28Q7Z3Y7 464 aa19.62■□□□□ 0.73
LINC01398-201ENST00000416581 POGKQ9P215 609 aa19.62■□□□□ 0.73
LINC01398-201ENST00000416581 CCDC125Q86Z20 511 aa19.61■□□□□ 0.73
LINC01398-201ENST00000416581 SLIT2O94813 1529 aa19.61■□□□□ 0.73
LINC01398-201ENST00000416581 RGPD8O14715 1765 aaPredicted RBP19.6■□□□□ 0.73
LINC01398-201ENST00000416581 HAP1P54257 671 aaPredicted RBP19.6■□□□□ 0.73
LINC01398-201ENST00000416581 PRAM1Q96QH2 718 aa19.6■□□□□ 0.73
LINC01398-201ENST00000416581 ADGRB1O14514 1584 aa19.6■□□□□ 0.73
LINC01398-201ENST00000416581 NWD2Q9ULI1 1742 aa19.59■□□□□ 0.73
LINC01398-201ENST00000416581 GJD4Q96KN9 370 aaPredicted RBP19.59■□□□□ 0.73
LINC01398-201ENST00000416581 UNC5CLQ8IV45 518 aa19.58■□□□□ 0.72
LINC01398-201ENST00000416581 ABCA3Q99758 1704 aa19.56■□□□□ 0.72
LINC01398-201ENST00000416581 TULP4Q9NRJ4 1543 aa19.56■□□□□ 0.72
LINC01398-201ENST00000416581 GPRASP1Q5JY77 1395 aa19.55■□□□□ 0.72
LINC01398-201ENST00000416581 ITSN1Q15811 1721 aa19.54■□□□□ 0.72
LINC01398-201ENST00000416581 PLCH1Q4KWH8 1693 aa19.53■□□□□ 0.72
LINC01398-201ENST00000416581 RALGAPBQ86X10 1494 aa19.53■□□□□ 0.72
LINC01398-201ENST00000416581 SAFB2Q14151 953 aaKnown RBP eCLIP19.52■□□□□ 0.72
LINC01398-201ENST00000416581 GLI3P10071 1580 aa19.52■□□□□ 0.71
LINC01398-201ENST00000416581 DCAF11Q8TEB1 546 aa19.51■□□□□ 0.71
LINC01398-201ENST00000416581 VPS72Q15906 364 aa19.5■□□□□ 0.71
LINC01398-201ENST00000416581 LMOD2Q6P5Q4 547 aa19.5■□□□□ 0.71
LINC01398-201ENST00000416581 TRAK1Q9UPV9 953 aa19.5■□□□□ 0.71
LINC01398-201ENST00000416581 TRPM3Q9HCF6 1732 aaPredicted RBP19.5■□□□□ 0.71
LINC01398-201ENST00000416581 KIAA1210Q9ULL0 1709 aa19.49■□□□□ 0.71
LINC01398-201ENST00000416581 BLMP54132 1417 aaPredicted RBP19.49■□□□□ 0.71
LINC01398-201ENST00000416581 ALS2Q96Q42 1657 aa19.49■□□□□ 0.71
LINC01398-201ENST00000416581 ARHGEF28Q8N1W1 1705 aaKnown RBP19.48■□□□□ 0.71
LINC01398-201ENST00000416581 WASLO00401 505 aaPredicted RBP19.48■□□□□ 0.71
LINC01398-201ENST00000416581 ZRANB1Q9UGI0 708 aa19.47■□□□□ 0.71
LINC01398-201ENST00000416581 KDM2AQ9Y2K7 1162 aa19.47■□□□□ 0.71
LINC01398-201ENST00000416581 SRCAPQ6ZRS2 3230 aa19.47■□□□□ 0.71
LINC01398-201ENST00000416581 COL14A1Q05707 1796 aaKnown RBP19.47■□□□□ 0.71
LINC01398-201ENST00000416581 PMFBP1Q8TBY8 1022 aa19.46■□□□□ 0.71
LINC01398-201ENST00000416581 MINK1Q8N4C8 1332 aaPredicted RBP19.46■□□□□ 0.71
LINC01398-201ENST00000416581 ATP7BP35670 1465 aa19.44■□□□□ 0.7
LINC01398-201ENST00000416581 SF3B2Q13435 895 aaKnown RBP19.44■□□□□ 0.7
LINC01398-201ENST00000416581 NGDNQ8NEJ9 315 aaKnown RBP19.44■□□□□ 0.7
LINC01398-201ENST00000416581 CCDC9Q9Y3X0 531 aaKnown RBP19.44■□□□□ 0.7
LINC01398-201ENST00000416581 NRAPQ86VF7 1730 aa19.43■□□□□ 0.7
LINC01398-201ENST00000416581 CABLES1Q8TDN4 633 aa19.43■□□□□ 0.7
LINC01398-201ENST00000416581 HIRIP3Q9BW71 556 aaPredicted RBP19.43■□□□□ 0.7
LINC01398-201ENST00000416581 BRWD3Q6RI45 1802 aa19.42■□□□□ 0.7
LINC01398-201ENST00000416581 ONECUT3O60422 494 aaPredicted RBP19.42■□□□□ 0.7
LINC01398-201ENST00000416581 SEPT12Q8IYM1 358 aa19.41■□□□□ 0.7
LINC01398-201ENST00000416581 PRR36Q9H6K5 1346 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms