RNA–Protein interactions for RNA: ENST00000416516.2

DCLK3-201, Transcript of doublecortin like kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DCLK3, Length 5,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3-201ENST00000416516 PSMA5P28066 241 aa13.15□□□□□ -0.3
DCLK3-201ENST00000416516 ARGLU1Q9NWB6 273 aaPredicted RBP13.15□□□□□ -0.3
DCLK3-201ENST00000416516 FGD6Q6ZV73 1430 aa13.15□□□□□ -0.3
DCLK3-201ENST00000416516 FKBP5Q13451 457 aaPredicted RBP13.15□□□□□ -0.3
DCLK3-201ENST00000416516 CHMP5Q9NZZ3 219 aa13.15□□□□□ -0.3
DCLK3-201ENST00000416516 PIP4K2AP48426 406 aaPredicted RBP13.15□□□□□ -0.3
DCLK3-201ENST00000416516 SASS6Q6UVJ0 657 aa13.15□□□□□ -0.3
DCLK3-201ENST00000416516 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
DCLK3-201ENST00000416516 RUFY1Q96T51 708 aa13.15□□□□□ -0.3
DCLK3-201ENST00000416516 SMC3Q9UQE7 1217 aa13.15□□□□□ -0.31
DCLK3-201ENST00000416516 NUTM2DQ5VT03 806 aaPredicted RBP13.14□□□□□ -0.31
DCLK3-201ENST00000416516 TBC1D2BQ9UPU7 963 aa13.14□□□□□ -0.31
DCLK3-201ENST00000416516 NINLQ9Y2I6 1382 aa13.14□□□□□ -0.31
DCLK3-201ENST00000416516 HIP1O00291 1037 aa13.14□□□□□ -0.31
DCLK3-201ENST00000416516 OFD1O75665 1012 aa13.14□□□□□ -0.31
DCLK3-201ENST00000416516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.14□□□□□ -0.31
DCLK3-201ENST00000416516 RUNDC1Q96C34 613 aa13.14□□□□□ -0.31
DCLK3-201ENST00000416516 LRRC9Q6ZRR7 1453 aa13.13□□□□□ -0.31
DCLK3-201ENST00000416516 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
DCLK3-201ENST00000416516 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
DCLK3-201ENST00000416516 ATAD2BQ9ULI0 1458 aa13.13□□□□□ -0.31
DCLK3-201ENST00000416516 ELL2O00472 640 aaPredicted RBP13.13□□□□□ -0.31
DCLK3-201ENST00000416516 FBXW7Q969H0 707 aa13.13□□□□□ -0.31
DCLK3-201ENST00000416516 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
DCLK3-201ENST00000416516 MINK1Q8N4C8 1332 aaPredicted RBP13.12□□□□□ -0.31
DCLK3-201ENST00000416516 RIPK4P57078 832 aa13.12□□□□□ -0.31
DCLK3-201ENST00000416516 AKNAQ7Z591 1439 aa13.12□□□□□ -0.31
DCLK3-201ENST00000416516 EPS15P42566 896 aa13.12□□□□□ -0.31
DCLK3-201ENST00000416516 DCTN1Q14203 1278 aa13.12□□□□□ -0.31
DCLK3-201ENST00000416516 ERCC4Q92889 916 aaPredicted RBP13.12□□□□□ -0.31
DCLK3-201ENST00000416516 RIC3Q7Z5B4 369 aa13.12□□□□□ -0.31
DCLK3-201ENST00000416516 GPRASP1Q5JY77 1395 aa13.11□□□□□ -0.31
DCLK3-201ENST00000416516 TSPYL4Q9UJ04 414 aa13.11□□□□□ -0.31
DCLK3-201ENST00000416516 GNAI3P08754 354 aa13.11□□□□□ -0.31
DCLK3-201ENST00000416516 BACH2Q9BYV9 841 aa13.11□□□□□ -0.31
DCLK3-201ENST00000416516 BRD4O60885 1362 aaPredicted RBP13.1□□□□□ -0.31
DCLK3-201ENST00000416516 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.1□□□□□ -0.31
DCLK3-201ENST00000416516 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
DCLK3-201ENST00000416516 LETM1O95202 739 aaPredicted RBP13.1□□□□□ -0.31
DCLK3-201ENST00000416516 TXLNAP40222 546 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 FOXD4L5Q5VV16 416 aaPredicted RBP13.09□□□□□ -0.31
DCLK3-201ENST00000416516 FOXD4L4Q8WXT5 416 aaPredicted RBP13.09□□□□□ -0.31
DCLK3-201ENST00000416516 GNL3LQ9NVN8 582 aaKnown RBP13.09□□□□□ -0.31
DCLK3-201ENST00000416516 IGF1RP08069 1367 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 PDCP20941 246 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 ERC1Q8IUD2 1116 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 CCP110O43303 1012 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 MCM2P49736 904 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 HSP90B2PQ58FF3 399 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 TXLNBQ8N3L3 684 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 CDCA7LQ96GN5 454 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 ARAP1Q96P48 1450 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 CCAR1Q8IX12 1150 aaKnown RBP13.09□□□□□ -0.31
DCLK3-201ENST00000416516 MYOM3Q5VTT5 1437 aa13.09□□□□□ -0.31
DCLK3-201ENST00000416516 UBTFL1P0CB47 393 aaPredicted RBP13.08□□□□□ -0.32
DCLK3-201ENST00000416516 WASHC4Q2M389 1173 aa13.08□□□□□ -0.32
DCLK3-201ENST00000416516 CCDC184Q52MB2 194 aa13.08□□□□□ -0.32
DCLK3-201ENST00000416516 NAP1L1P55209 391 aaKnown RBP13.07□□□□□ -0.32
DCLK3-201ENST00000416516 CNTROBQ8N137 903 aa13.07□□□□□ -0.32
DCLK3-201ENST00000416516 CLASRPQ8N2M8 674 aaKnown RBP13.07□□□□□ -0.32
DCLK3-201ENST00000416516 MNS1Q8NEH6 495 aa13.07□□□□□ -0.32
DCLK3-201ENST00000416516 PLEKHO1Q53GL0 409 aaPredicted RBP13.07□□□□□ -0.32
DCLK3-201ENST00000416516 MRE11P49959 708 aa13.07□□□□□ -0.32
DCLK3-201ENST00000416516 ZRSR2Q15696 482 aaKnown RBP13.07□□□□□ -0.32
DCLK3-201ENST00000416516 LUC7LQ9NQ29 371 aaKnown RBP13.07□□□□□ -0.32
DCLK3-201ENST00000416516 NLRP2Q9NX02 1062 aa13.07□□□□□ -0.32
DCLK3-201ENST00000416516 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
DCLK3-201ENST00000416516 FAM13BQ9NYF5 915 aa13.07□□□□□ -0.32
DCLK3-201ENST00000416516 SF3B2Q13435 895 aaKnown RBP13.06□□□□□ -0.32
DCLK3-201ENST00000416516 KIF6Q6ZMV9 814 aa13.06□□□□□ -0.32
DCLK3-201ENST00000416516 VPS37CA5D8V6 355 aaPredicted RBP13.06□□□□□ -0.32
DCLK3-201ENST00000416516 FILIP1LQ4L180 1135 aa13.06□□□□□ -0.32
DCLK3-201ENST00000416516 CCDC30Q5VVM6 783 aa13.06□□□□□ -0.32
DCLK3-201ENST00000416516 PNISRQ8TF01 805 aaKnown RBP13.06□□□□□ -0.32
DCLK3-201ENST00000416516 SMARCE1Q969G3 411 aa13.06□□□□□ -0.32
DCLK3-201ENST00000416516 NEUROD6Q96NK8 337 aa13.06□□□□□ -0.32
DCLK3-201ENST00000416516 C22orf23Q9BZE7 217 aa13.06□□□□□ -0.32
DCLK3-201ENST00000416516 WDR97A6NE52 1622 aa13.05□□□□□ -0.32
DCLK3-201ENST00000416516 HSP90AB2PQ58FF8 381 aa13.05□□□□□ -0.32
DCLK3-201ENST00000416516 CYB5RLQ6IPT4 315 aa13.05□□□□□ -0.32
DCLK3-201ENST00000416516 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
DCLK3-201ENST00000416516 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.05□□□□□ -0.32
DCLK3-201ENST00000416516 JMYQ8N9B5 988 aa13.05□□□□□ -0.32
DCLK3-201ENST00000416516 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
DCLK3-201ENST00000416516 CDC45O75419 566 aa13.05□□□□□ -0.32
DCLK3-201ENST00000416516 IKQ13123 557 aaPredicted RBP13.05□□□□□ -0.32
DCLK3-201ENST00000416516 SYCP1Q15431 976 aa13.04□□□□□ -0.32
DCLK3-201ENST00000416516 CDK5RAP3Q96JB5 506 aa13.04□□□□□ -0.32
DCLK3-201ENST00000416516 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
DCLK3-201ENST00000416516 ZNF592Q92610 1267 aa13.04□□□□□ -0.32
DCLK3-201ENST00000416516 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
DCLK3-201ENST00000416516 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.03□□□□□ -0.32
DCLK3-201ENST00000416516 ADAMTS8Q9UP79 889 aa13.03□□□□□ -0.32
DCLK3-201ENST00000416516 PDIA4P13667 645 aaKnown RBP13.03□□□□□ -0.32
DCLK3-201ENST00000416516 SDF4Q9BRK5 362 aa13.03□□□□□ -0.32
DCLK3-201ENST00000416516 CCDC191Q8NCU4 936 aa13.03□□□□□ -0.32
DCLK3-201ENST00000416516 PANK1Q8TE04 598 aa13.03□□□□□ -0.32
DCLK3-201ENST00000416516 MAGEC2Q9UBF1 373 aaPredicted RBP13.03□□□□□ -0.32
DCLK3-201ENST00000416516 PAF1Q8N7H5 531 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms