RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 UBAP1LF5GYI3 381 aa28.12■■■□□ 2.09
FAM3A-207ENST00000416319 ATF3P18847 181 aa28.12■■■□□ 2.09
FAM3A-207ENST00000416319 EIF3AQ14152 1382 aaKnown RBP28.11■■■□□ 2.09
FAM3A-207ENST00000416319 FBXO41Q8TF61 875 aa28.09■■■□□ 2.09
FAM3A-207ENST00000416319 ARHGEF28Q8N1W1 1705 aaKnown RBP28.09■■■□□ 2.09
FAM3A-207ENST00000416319 CENPJQ9HC77 1338 aaPredicted RBP28.08■■■□□ 2.09
FAM3A-207ENST00000416319 NALCNQ8IZF0 1738 aa28.07■■■□□ 2.08
FAM3A-207ENST00000416319 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.07■■■□□ 2.08
FAM3A-207ENST00000416319 CDC42BPGQ6DT37 1551 aa28.07■■■□□ 2.08
FAM3A-207ENST00000416319 SAFB2Q14151 953 aaKnown RBP eCLIP28.06■■■□□ 2.08
FAM3A-207ENST00000416319 SLAIN2Q9P270 581 aa28.05■■■□□ 2.08
FAM3A-207ENST00000416319 ADGRB2O60241 1585 aa28.03■■■□□ 2.08
FAM3A-207ENST00000416319 MST1RQ04912 1400 aa28.01■■■□□ 2.08
FAM3A-207ENST00000416319 MINK1Q8N4C8 1332 aaPredicted RBP28.01■■■□□ 2.07
FAM3A-207ENST00000416319 SBNO2Q9Y2G9 1366 aa28■■■□□ 2.07
FAM3A-207ENST00000416319 WASLO00401 505 aaPredicted RBP27.98■■■□□ 2.07
FAM3A-207ENST00000416319 USP47Q96K76 1375 aa27.98■■■□□ 2.07
FAM3A-207ENST00000416319 C1orf167Q5SNV9 1468 aa27.96■■■□□ 2.07
FAM3A-207ENST00000416319 HIRIP3Q9BW71 556 aaPredicted RBP27.96■■■□□ 2.07
FAM3A-207ENST00000416319 PIP4K2BP78356 416 aa27.95■■■□□ 2.06
FAM3A-207ENST00000416319 SLC24A1O60721 1099 aa27.94■■■□□ 2.06
FAM3A-207ENST00000416319 ANKARQ7Z5J8 1434 aa27.93■■■□□ 2.06
FAM3A-207ENST00000416319 ST20-MTHFSA0A0A6YYL1 179 aa27.92■■■□□ 2.06
FAM3A-207ENST00000416319 QRICH2Q9H0J4 1663 aa27.91■■■□□ 2.06
FAM3A-207ENST00000416319 BRINP3Q76B58 766 aa27.9■■■□□ 2.06
FAM3A-207ENST00000416319 CDK19Q9BWU1 502 aa27.9■■■□□ 2.06
FAM3A-207ENST00000416319 EVC2Q86UK5 1308 aa27.9■■■□□ 2.06
FAM3A-207ENST00000416319 SCAF1Q9H7N4 1312 aaKnown RBP27.9■■■□□ 2.06
FAM3A-207ENST00000416319 FMN2Q9NZ56 1722 aa27.89■■■□□ 2.06
FAM3A-207ENST00000416319 TULP4Q9NRJ4 1543 aa27.89■■■□□ 2.06
FAM3A-207ENST00000416319 TESK2Q96S53 571 aa27.89■■■□□ 2.06
FAM3A-207ENST00000416319 ZEB1P37275 1124 aaPredicted RBP27.87■■■□□ 2.05
FAM3A-207ENST00000416319 EIF4G2P78344 907 aaKnown RBP eCLIP27.86■■■□□ 2.05
FAM3A-207ENST00000416319 NUTM2FA1L443 756 aa27.84■■■□□ 2.05
FAM3A-207ENST00000416319 ESCO1Q5FWF5 840 aa27.84■■■□□ 2.05
FAM3A-207ENST00000416319 ORAI2Q96SN7 254 aa27.84■■■□□ 2.05
FAM3A-207ENST00000416319 ROBO1Q9Y6N7 1651 aa27.84■■■□□ 2.05
FAM3A-207ENST00000416319 PUS7Q96PZ0 661 aaKnown RBP27.83■■■□□ 2.05
FAM3A-207ENST00000416319 PRR36Q9H6K5 1346 aa27.83■■■□□ 2.05
FAM3A-207ENST00000416319 SRPK2P78362 688 aaKnown RBP27.82■■■□□ 2.04
FAM3A-207ENST00000416319 NUDT16Q96DE0 195 aaKnown RBP27.82■■■□□ 2.04
FAM3A-207ENST00000416319 ATP7BP35670 1465 aa27.82■■■□□ 2.04
FAM3A-207ENST00000416319 CCDC61Q9Y6R9 512 aa27.81■■■□□ 2.04
FAM3A-207ENST00000416319 ILDR1Q86SU0 546 aaPredicted RBP27.8■■■□□ 2.04
FAM3A-207ENST00000416319 USP32Q8NFA0 1604 aa27.79■■■□□ 2.04
FAM3A-207ENST00000416319 CABP2Q9NPB3 220 aa27.79■■■□□ 2.04
FAM3A-207ENST00000416319 PHF8Q9UPP1 1060 aa27.79■■■□□ 2.04
FAM3A-207ENST00000416319 HSPA5P11021 654 aaKnown RBP27.78■■■□□ 2.04
FAM3A-207ENST00000416319 AHDC1Q5TGY3 1603 aaPredicted RBP27.78■■■□□ 2.04
FAM3A-207ENST00000416319 TMF1P82094 1093 aa27.77■■■□□ 2.04
FAM3A-207ENST00000416319 ATAD2Q6PL18 1390 aa27.76■■■□□ 2.03
FAM3A-207ENST00000416319 NPHP3Q7Z494 1330 aa27.75■■■□□ 2.03
FAM3A-207ENST00000416319 PLEKHG3A1L390 1219 aa27.75■■■□□ 2.03
FAM3A-207ENST00000416319 HSPA1LP34931 641 aa27.75■■■□□ 2.03
FAM3A-207ENST00000416319 KIF1AQ12756 1690 aa27.74■■■□□ 2.03
FAM3A-207ENST00000416319 CDCA8Q53HL2 280 aa27.73■■■□□ 2.03
FAM3A-207ENST00000416319 SOS2Q07890 1332 aaPredicted RBP27.71■■■□□ 2.03
FAM3A-207ENST00000416319 FOXO3O43524 673 aa27.71■■■□□ 2.03
FAM3A-207ENST00000416319 DISP3Q9P2K9 1392 aa27.7■■■□□ 2.02
FAM3A-207ENST00000416319 NHSL1Q5SYE7 1610 aa27.7■■■□□ 2.02
FAM3A-207ENST00000416319 TOPAZ1Q8N9V7 1692 aa27.69■■■□□ 2.02
FAM3A-207ENST00000416319 PPIP5K1Q6PFW1 1433 aa27.69■■■□□ 2.02
FAM3A-207ENST00000416319 PMFBP1Q8TBY8 1022 aa27.69■■■□□ 2.02
FAM3A-207ENST00000416319 POLR3AO14802 1390 aaPredicted RBP27.69■■■□□ 2.02
FAM3A-207ENST00000416319 ITSN1Q15811 1721 aa27.67■■■□□ 2.02
FAM3A-207ENST00000416319 DDX17Q92841 729 aaKnown RBP27.67■■■□□ 2.02
FAM3A-207ENST00000416319 CABP1Q9NZU7 370 aa27.67■■■□□ 2.02
FAM3A-207ENST00000416319 NINLQ9Y2I6 1382 aa27.66■■■□□ 2.02
FAM3A-207ENST00000416319 NGDNQ8NEJ9 315 aaKnown RBP27.66■■■□□ 2.02
FAM3A-207ENST00000416319 PXDNQ92626 1479 aa27.65■■■□□ 2.02
FAM3A-207ENST00000416319 RGPD8O14715 1765 aaPredicted RBP27.65■■■□□ 2.02
FAM3A-207ENST00000416319 COL16A1Q07092 1604 aaPredicted RBP27.64■■■□□ 2.02
FAM3A-207ENST00000416319 PSME1Q06323 249 aa27.64■■■□□ 2.02
FAM3A-207ENST00000416319 LRRC59Q96AG4 307 aaKnown RBP27.64■■■□□ 2.02
FAM3A-207ENST00000416319 ACEP12821 1306 aa27.64■■■□□ 2.01
FAM3A-207ENST00000416319 KRT28Q7Z3Y7 464 aa27.63■■■□□ 2.01
FAM3A-207ENST00000416319 PHLPP1O60346 1717 aa27.63■■■□□ 2.01
FAM3A-207ENST00000416319 SBNO1A3KN83 1393 aa27.61■■■□□ 2.01
FAM3A-207ENST00000416319 BRD4O60885 1362 aaPredicted RBP27.6■■■□□ 2.01
FAM3A-207ENST00000416319 ZNF692Q9BU19 519 aaPredicted RBP27.59■■■□□ 2.01
FAM3A-207ENST00000416319 JCADQ9P266 1359 aa27.59■■■□□ 2.01
FAM3A-207ENST00000416319 CPSF1Q10570 1443 aaKnown RBP27.58■■■□□ 2
FAM3A-207ENST00000416319 XPCQ01831 940 aaPredicted RBP27.57■■■□□ 2
FAM3A-207ENST00000416319 TMC1Q8TDI8 760 aa27.57■■■□□ 2
FAM3A-207ENST00000416319 SLC12A5Q9H2X9 1139 aa27.56■■■□□ 2
FAM3A-207ENST00000416319 SPATA31A3Q5VYP0 1347 aa27.56■■■□□ 2
FAM3A-207ENST00000416319 TERF2IPQ9NYB0 399 aa27.54■■■□□ 2
FAM3A-207ENST00000416319 USP6P35125 1406 aa27.53■■■□□ 2
FAM3A-207ENST00000416319 TNS3Q68CZ2 1445 aa27.53■■■□□ 2
FAM3A-207ENST00000416319 C11orf95C9JLR9 678 aaPredicted RBP27.53■■■□□ 2
FAM3A-207ENST00000416319 CD163L1Q9NR16 1453 aa27.52■■■□□ 2
FAM3A-207ENST00000416319 PNPLA6Q8IY17 1366 aa27.52■■■□□ 2
FAM3A-207ENST00000416319 HDGFL2Q7Z4V5 671 aaPredicted RBP27.52■■■□□ 2
FAM3A-207ENST00000416319 SSH2Q76I76 1423 aa27.51■■□□□ 1.99
FAM3A-207ENST00000416319 ARHGEF10O15013 1369 aa27.51■■□□□ 1.99
FAM3A-207ENST00000416319 ANKRD36BQ8N2N9 1353 aa27.49■■□□□ 1.99
FAM3A-207ENST00000416319 SPATA31A6Q5VVP1 1343 aa27.49■■□□□ 1.99
FAM3A-207ENST00000416319 KTN1Q86UP2 1357 aaKnown RBP27.48■■□□□ 1.99
FAM3A-207ENST00000416319 KIF7Q2M1P5 1343 aa27.48■■□□□ 1.99
FAM3A-207ENST00000416319 A0A1W2PP64 1363 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms