RNA–Protein interactions for RNA: ENST00000416277.5

VWA3B-202, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 2,827 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-202ENST00000416277 VSIG10Q8N0Z9 540 aa17.78■□□□□ 0.44
VWA3B-202ENST00000416277 NINLQ9Y2I6 1382 aa17.77■□□□□ 0.44
VWA3B-202ENST00000416277 C14orf93Q9H972 538 aaKnown RBP17.76■□□□□ 0.43
VWA3B-202ENST00000416277 VIRMAQ69YN4 1812 aaKnown RBP17.76■□□□□ 0.43
VWA3B-202ENST00000416277 USP35Q9P2H5 1018 aa17.76■□□□□ 0.43
VWA3B-202ENST00000416277 IQSEC2Q5JU85 1478 aa17.75■□□□□ 0.43
VWA3B-202ENST00000416277 ABCC3O15438 1527 aa17.75■□□□□ 0.43
VWA3B-202ENST00000416277 FAM161AQ3B820 660 aa17.75■□□□□ 0.43
VWA3B-202ENST00000416277 CAMSAP1Q5T5Y3 1602 aa17.75■□□□□ 0.43
VWA3B-202ENST00000416277 CFAP65Q6ZU64 1925 aaKnown RBP17.75■□□□□ 0.43
VWA3B-202ENST00000416277 PPM1GO15355 546 aaPredicted RBP17.75■□□□□ 0.43
VWA3B-202ENST00000416277 RPGRIP1LQ68CZ1 1315 aa17.74■□□□□ 0.43
VWA3B-202ENST00000416277 BCAR3O75815 825 aa17.74■□□□□ 0.43
VWA3B-202ENST00000416277 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
VWA3B-202ENST00000416277 GLI2P10070 1586 aa17.73■□□□□ 0.43
VWA3B-202ENST00000416277 PIK3C2BO00750 1634 aa17.73■□□□□ 0.43
VWA3B-202ENST00000416277 C8orf34Q49A92 452 aa17.73■□□□□ 0.43
VWA3B-202ENST00000416277 ARHGEF28Q8N1W1 1705 aaKnown RBP17.73■□□□□ 0.43
VWA3B-202ENST00000416277 WWC1Q8IX03 1113 aa17.72■□□□□ 0.43
VWA3B-202ENST00000416277 LAS1LQ9Y4W2 734 aaKnown RBP17.72■□□□□ 0.43
VWA3B-202ENST00000416277 PDE3AQ14432 1141 aa17.72■□□□□ 0.43
VWA3B-202ENST00000416277 SIGLEC1Q9BZZ2 1709 aa17.72■□□□□ 0.43
VWA3B-202ENST00000416277 CGNL1Q0VF96 1302 aa17.71■□□□□ 0.43
VWA3B-202ENST00000416277 CHGAP10645 457 aaKnown RBP17.71■□□□□ 0.43
VWA3B-202ENST00000416277 MORC1Q86VD1 984 aa17.71■□□□□ 0.43
VWA3B-202ENST00000416277 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
VWA3B-202ENST00000416277 CD109Q6YHK3 1445 aa17.71■□□□□ 0.43
VWA3B-202ENST00000416277 NEFMP07197 916 aa17.7■□□□□ 0.42
VWA3B-202ENST00000416277 NEXMIFQ5QGS0 1516 aa17.69■□□□□ 0.42
VWA3B-202ENST00000416277 RUNDC1Q96C34 613 aa17.69■□□□□ 0.42
VWA3B-202ENST00000416277 PUS7Q96PZ0 661 aaKnown RBP17.69■□□□□ 0.42
VWA3B-202ENST00000416277 SLC12A5Q9H2X9 1139 aa17.69■□□□□ 0.42
VWA3B-202ENST00000416277 TULP4Q9NRJ4 1543 aa17.68■□□□□ 0.42
VWA3B-202ENST00000416277 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
VWA3B-202ENST00000416277 NSD2O96028 1365 aa17.67■□□□□ 0.42
VWA3B-202ENST00000416277 GGT6Q6P531 493 aa17.66■□□□□ 0.42
VWA3B-202ENST00000416277 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
VWA3B-202ENST00000416277 RGS3P49796 1198 aa17.66■□□□□ 0.42
VWA3B-202ENST00000416277 ANKRD36BQ8N2N9 1353 aa17.65■□□□□ 0.42
VWA3B-202ENST00000416277 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
VWA3B-202ENST00000416277 ADGRB2O60241 1585 aa17.64■□□□□ 0.41
VWA3B-202ENST00000416277 CLUAP1Q96AJ1 413 aa17.64■□□□□ 0.41
VWA3B-202ENST00000416277 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
VWA3B-202ENST00000416277 WDR63Q8IWG1 891 aa17.64■□□□□ 0.41
VWA3B-202ENST00000416277 DIP2CQ9Y2E4 1556 aa17.64■□□□□ 0.41
VWA3B-202ENST00000416277 NEO1Q92859 1461 aa17.63■□□□□ 0.41
VWA3B-202ENST00000416277 FGD1P98174 961 aa17.63■□□□□ 0.41
VWA3B-202ENST00000416277 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
VWA3B-202ENST00000416277 TCP11L2Q8N4U5 519 aa17.63■□□□□ 0.41
VWA3B-202ENST00000416277 EVC2Q86UK5 1308 aa17.63■□□□□ 0.41
VWA3B-202ENST00000416277 IGHDP01880 384 aa17.63■□□□□ 0.41
VWA3B-202ENST00000416277 PDE4CQ08493 712 aa17.63■□□□□ 0.41
VWA3B-202ENST00000416277 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
VWA3B-202ENST00000416277 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
VWA3B-202ENST00000416277 AAMPQ13685 434 aa17.62■□□□□ 0.41
VWA3B-202ENST00000416277 BRPF3Q9ULD4 1205 aa17.62■□□□□ 0.41
VWA3B-202ENST00000416277 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
VWA3B-202ENST00000416277 ARHGAP31Q2M1Z3 1444 aa17.62■□□□□ 0.41
VWA3B-202ENST00000416277 MTHFSP49914 203 aa17.62■□□□□ 0.41
VWA3B-202ENST00000416277 MAPK8IP3Q9UPT6 1336 aa17.62■□□□□ 0.41
VWA3B-202ENST00000416277 RARSP54136 660 aaKnown RBP17.61■□□□□ 0.41
VWA3B-202ENST00000416277 PANK1Q8TE04 598 aa17.61■□□□□ 0.41
VWA3B-202ENST00000416277 VGFO15240 615 aaPredicted RBP17.6■□□□□ 0.41
VWA3B-202ENST00000416277 COG6Q9Y2V7 657 aa17.6■□□□□ 0.41
VWA3B-202ENST00000416277 ZFYVE9O95405 1425 aa17.6■□□□□ 0.41
VWA3B-202ENST00000416277 RRP7AQ9Y3A4 280 aaKnown RBP17.6■□□□□ 0.41
VWA3B-202ENST00000416277 ANKRD26Q9UPS8 1709 aa17.59■□□□□ 0.41
VWA3B-202ENST00000416277 NEUROD2Q15784 382 aa17.59■□□□□ 0.41
VWA3B-202ENST00000416277 RICTORQ6R327 1708 aa17.58■□□□□ 0.4
VWA3B-202ENST00000416277 A0A0U1RQG5 324 aaPredicted RBP17.57■□□□□ 0.4
VWA3B-202ENST00000416277 ZMYM3Q14202 1370 aa17.57■□□□□ 0.4
VWA3B-202ENST00000416277 MYO5BQ9ULV0 1848 aa17.57■□□□□ 0.4
VWA3B-202ENST00000416277 SLC4A3P48751 1232 aa17.57■□□□□ 0.4
VWA3B-202ENST00000416277 CLTCQ00610 1675 aaKnown RBP17.57■□□□□ 0.4
VWA3B-202ENST00000416277 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
VWA3B-202ENST00000416277 FRAT1Q92837 279 aaPredicted RBP17.56■□□□□ 0.4
VWA3B-202ENST00000416277 ABCC11Q96J66 1382 aa17.56■□□□□ 0.4
VWA3B-202ENST00000416277 RBM10P98175 930 aaKnown RBP17.56■□□□□ 0.4
VWA3B-202ENST00000416277 NFKBIBQ15653 356 aa17.55■□□□□ 0.4
VWA3B-202ENST00000416277 MYH16Q9H6N6 1097 aa17.55■□□□□ 0.4
VWA3B-202ENST00000416277 PREX1Q8TCU6 1659 aa17.54■□□□□ 0.4
VWA3B-202ENST00000416277 USP19O94966 1318 aa17.54■□□□□ 0.4
VWA3B-202ENST00000416277 COL3A1P02461 1466 aaPredicted RBP17.54■□□□□ 0.4
VWA3B-202ENST00000416277 TMEM131LA2VDJ0 1609 aa17.54■□□□□ 0.4
VWA3B-202ENST00000416277 A0A1W2PP64 1363 aa17.53■□□□□ 0.4
VWA3B-202ENST00000416277 RLBP1P12271 317 aa17.53■□□□□ 0.4
VWA3B-202ENST00000416277 MED14O60244 1454 aa17.52■□□□□ 0.4
VWA3B-202ENST00000416277 PTPRMP28827 1452 aa17.52■□□□□ 0.4
VWA3B-202ENST00000416277 CABP2Q9NPB3 220 aa17.52■□□□□ 0.4
VWA3B-202ENST00000416277 NLRP1Q9C000 1473 aa17.52■□□□□ 0.39
VWA3B-202ENST00000416277 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.39
VWA3B-202ENST00000416277 PDIA4P13667 645 aaKnown RBP17.52■□□□□ 0.39
VWA3B-202ENST00000416277 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.39
VWA3B-202ENST00000416277 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.39
VWA3B-202ENST00000416277 RAPGEF3O95398 923 aa17.51■□□□□ 0.39
VWA3B-202ENST00000416277 FAM43AQ8N2R8 423 aa17.51■□□□□ 0.39
VWA3B-202ENST00000416277 CT47B1P0C2W7 299 aaPredicted RBP17.51■□□□□ 0.39
VWA3B-202ENST00000416277 SLC52A1Q9NWF4 448 aa17.51■□□□□ 0.39
VWA3B-202ENST00000416277 IDI1Q13907 227 aa17.5■□□□□ 0.39
VWA3B-202ENST00000416277 PCDHB15Q9Y5E8 787 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms