RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 C19orf44Q9H6X5 657 aa20.43■□□□□ 0.86
SAPCD1-208ENST00000415669 TIMELESSQ9UNS1 1208 aa20.43■□□□□ 0.86
SAPCD1-208ENST00000415669 ROBO1Q9Y6N7 1651 aa20.42■□□□□ 0.86
SAPCD1-208ENST00000415669 FMN2Q9NZ56 1722 aa20.42■□□□□ 0.86
SAPCD1-208ENST00000415669 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
SAPCD1-208ENST00000415669 ADGRB2O60241 1585 aa20.42■□□□□ 0.86
SAPCD1-208ENST00000415669 ATF3P18847 181 aa20.41■□□□□ 0.86
SAPCD1-208ENST00000415669 SAFB2Q14151 953 aaKnown RBP eCLIP20.41■□□□□ 0.86
SAPCD1-208ENST00000415669 POGKQ9P215 609 aa20.41■□□□□ 0.86
SAPCD1-208ENST00000415669 PIP4K2BP78356 416 aa20.4■□□□□ 0.86
SAPCD1-208ENST00000415669 SIRT1Q96EB6 747 aa20.4■□□□□ 0.86
SAPCD1-208ENST00000415669 GPRASP1Q5JY77 1395 aa20.39■□□□□ 0.85
SAPCD1-208ENST00000415669 CADPS2Q86UW7 1296 aa20.39■□□□□ 0.85
SAPCD1-208ENST00000415669 RGPD8O14715 1765 aaPredicted RBP20.37■□□□□ 0.85
SAPCD1-208ENST00000415669 MST1RQ04912 1400 aa20.36■□□□□ 0.85
SAPCD1-208ENST00000415669 EIF3AQ14152 1382 aaKnown RBP20.35■□□□□ 0.85
SAPCD1-208ENST00000415669 CARD11Q9BXL7 1154 aa20.35■□□□□ 0.85
SAPCD1-208ENST00000415669 MINK1Q8N4C8 1332 aaPredicted RBP20.33■□□□□ 0.85
SAPCD1-208ENST00000415669 ILDR1Q86SU0 546 aaPredicted RBP20.33■□□□□ 0.85
SAPCD1-208ENST00000415669 SLAIN2Q9P270 581 aa20.33■□□□□ 0.85
SAPCD1-208ENST00000415669 CENPJQ9HC77 1338 aaPredicted RBP20.32■□□□□ 0.84
SAPCD1-208ENST00000415669 HIRIP3Q9BW71 556 aaPredicted RBP20.32■□□□□ 0.84
SAPCD1-208ENST00000415669 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
SAPCD1-208ENST00000415669 PHLPP1O60346 1717 aa20.31■□□□□ 0.84
SAPCD1-208ENST00000415669 ITSN1Q15811 1721 aa20.31■□□□□ 0.84
SAPCD1-208ENST00000415669 C1orf167Q5SNV9 1468 aa20.3■□□□□ 0.84
SAPCD1-208ENST00000415669 NHSL1Q5SYE7 1610 aa20.3■□□□□ 0.84
SAPCD1-208ENST00000415669 KIF1AQ12756 1690 aa20.29■□□□□ 0.84
SAPCD1-208ENST00000415669 TULP4Q9NRJ4 1543 aa20.28■□□□□ 0.84
SAPCD1-208ENST00000415669 NUTM2FA1L443 756 aa20.27■□□□□ 0.84
SAPCD1-208ENST00000415669 AHDC1Q5TGY3 1603 aaPredicted RBP20.26■□□□□ 0.83
SAPCD1-208ENST00000415669 TOPAZ1Q8N9V7 1692 aa20.26■□□□□ 0.83
SAPCD1-208ENST00000415669 USP47Q96K76 1375 aa20.24■□□□□ 0.83
SAPCD1-208ENST00000415669 BRINP3Q76B58 766 aa20.24■□□□□ 0.83
SAPCD1-208ENST00000415669 ANKARQ7Z5J8 1434 aa20.24■□□□□ 0.83
SAPCD1-208ENST00000415669 WASLO00401 505 aaPredicted RBP20.23■□□□□ 0.83
SAPCD1-208ENST00000415669 COL16A1Q07092 1604 aaPredicted RBP20.23■□□□□ 0.83
SAPCD1-208ENST00000415669 ATP7BP35670 1465 aa20.22■□□□□ 0.83
SAPCD1-208ENST00000415669 HSPA1LP34931 641 aa20.21■□□□□ 0.83
SAPCD1-208ENST00000415669 ESCO1Q5FWF5 840 aa20.21■□□□□ 0.83
SAPCD1-208ENST00000415669 SBNO2Q9Y2G9 1366 aa20.21■□□□□ 0.83
SAPCD1-208ENST00000415669 ORAI2Q96SN7 254 aa20.2■□□□□ 0.82
SAPCD1-208ENST00000415669 CDK19Q9BWU1 502 aa20.18■□□□□ 0.82
SAPCD1-208ENST00000415669 PRR36Q9H6K5 1346 aa20.18■□□□□ 0.82
SAPCD1-208ENST00000415669 SRPK2P78362 688 aaKnown RBP20.17■□□□□ 0.82
SAPCD1-208ENST00000415669 EVC2Q86UK5 1308 aa20.17■□□□□ 0.82
SAPCD1-208ENST00000415669 ST20-MTHFSA0A0A6YYL1 179 aa20.16■□□□□ 0.82
SAPCD1-208ENST00000415669 DDX17Q92841 729 aaKnown RBP20.15■□□□□ 0.82
SAPCD1-208ENST00000415669 SHPRHQ149N8 1683 aa20.14■□□□□ 0.81
SAPCD1-208ENST00000415669 CABP2Q9NPB3 220 aa20.14■□□□□ 0.81
SAPCD1-208ENST00000415669 NUDT16Q96DE0 195 aaKnown RBP20.13■□□□□ 0.81
SAPCD1-208ENST00000415669 PHF8Q9UPP1 1060 aa20.13■□□□□ 0.81
SAPCD1-208ENST00000415669 PXDNQ92626 1479 aa20.12■□□□□ 0.81
SAPCD1-208ENST00000415669 NPHP3Q7Z494 1330 aa20.12■□□□□ 0.81
SAPCD1-208ENST00000415669 PPIP5K1Q6PFW1 1433 aa20.11■□□□□ 0.81
SAPCD1-208ENST00000415669 PMFBP1Q8TBY8 1022 aa20.11■□□□□ 0.81
SAPCD1-208ENST00000415669 TRPM3Q9HCF6 1732 aaPredicted RBP20.1■□□□□ 0.81
SAPCD1-208ENST00000415669 FOXO3O43524 673 aa20.1■□□□□ 0.81
SAPCD1-208ENST00000415669 TESK2Q96S53 571 aa20.1■□□□□ 0.81
SAPCD1-208ENST00000415669 AKAP12Q02952 1782 aa20.1■□□□□ 0.81
SAPCD1-208ENST00000415669 EIF4G2P78344 907 aaKnown RBP eCLIP20.09■□□□□ 0.81
SAPCD1-208ENST00000415669 XPCQ01831 940 aaPredicted RBP20.08■□□□□ 0.81
SAPCD1-208ENST00000415669 CCDC61Q9Y6R9 512 aa20.08■□□□□ 0.81
SAPCD1-208ENST00000415669 ATAD2Q6PL18 1390 aa20.08■□□□□ 0.8
SAPCD1-208ENST00000415669 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.8
SAPCD1-208ENST00000415669 SOS2Q07890 1332 aaPredicted RBP20.07■□□□□ 0.8
SAPCD1-208ENST00000415669 HSPA5P11021 654 aaKnown RBP20.06■□□□□ 0.8
SAPCD1-208ENST00000415669 JCADQ9P266 1359 aa20.06■□□□□ 0.8
SAPCD1-208ENST00000415669 MON2Q7Z3U7 1717 aa20.05■□□□□ 0.8
SAPCD1-208ENST00000415669 SLC24A1O60721 1099 aa20.05■□□□□ 0.8
SAPCD1-208ENST00000415669 TMF1P82094 1093 aa20.05■□□□□ 0.8
SAPCD1-208ENST00000415669 NGDNQ8NEJ9 315 aaKnown RBP20.05■□□□□ 0.8
SAPCD1-208ENST00000415669 MYOM1P52179 1685 aa20.04■□□□□ 0.8
SAPCD1-208ENST00000415669 ALS2Q96Q42 1657 aa20.04■□□□□ 0.8
SAPCD1-208ENST00000415669 COL22A1Q8NFW1 1626 aaPredicted RBP20.04■□□□□ 0.8
SAPCD1-208ENST00000415669 PSME1Q06323 249 aa20.03■□□□□ 0.8
SAPCD1-208ENST00000415669 KRT28Q7Z3Y7 464 aa20.03■□□□□ 0.8
SAPCD1-208ENST00000415669 LRRC59Q96AG4 307 aaKnown RBP20.03■□□□□ 0.8
SAPCD1-208ENST00000415669 POLR3AO14802 1390 aaPredicted RBP20.03■□□□□ 0.8
SAPCD1-208ENST00000415669 ACEP12821 1306 aa20.02■□□□□ 0.8
SAPCD1-208ENST00000415669 NRKQ7Z2Y5 1582 aa20.02■□□□□ 0.8
SAPCD1-208ENST00000415669 ABCA3Q99758 1704 aa20.02■□□□□ 0.79
SAPCD1-208ENST00000415669 TNS3Q68CZ2 1445 aa20.02■□□□□ 0.79
SAPCD1-208ENST00000415669 MED1Q15648 1581 aaPredicted RBP20.01■□□□□ 0.79
SAPCD1-208ENST00000415669 PNPLA6Q8IY17 1366 aa20.01■□□□□ 0.79
SAPCD1-208ENST00000415669 PLEKHG3A1L390 1219 aa20.01■□□□□ 0.79
SAPCD1-208ENST00000415669 CABP1Q9NZU7 370 aa20.01■□□□□ 0.79
SAPCD1-208ENST00000415669 SBNO1A3KN83 1393 aa19.99■□□□□ 0.79
SAPCD1-208ENST00000415669 TMC1Q8TDI8 760 aa19.98■□□□□ 0.79
SAPCD1-208ENST00000415669 SPATA31A3Q5VYP0 1347 aa19.98■□□□□ 0.79
SAPCD1-208ENST00000415669 MARF1Q9Y4F3 1742 aaKnown RBP19.97■□□□□ 0.79
SAPCD1-208ENST00000415669 USP6P35125 1406 aa19.97■□□□□ 0.79
SAPCD1-208ENST00000415669 CDCA8Q53HL2 280 aa19.97■□□□□ 0.79
SAPCD1-208ENST00000415669 PUS7Q96PZ0 661 aaKnown RBP19.97■□□□□ 0.79
SAPCD1-208ENST00000415669 NINLQ9Y2I6 1382 aa19.96■□□□□ 0.79
SAPCD1-208ENST00000415669 CRYBG1Q9Y4K1 1723 aa19.96■□□□□ 0.79
SAPCD1-208ENST00000415669 SPATA31A6Q5VVP1 1343 aa19.96■□□□□ 0.79
SAPCD1-208ENST00000415669 LRP6O75581 1613 aa19.95■□□□□ 0.78
SAPCD1-208ENST00000415669 CD163L1Q9NR16 1453 aa19.95■□□□□ 0.78
SAPCD1-208ENST00000415669 PAK3O75914 559 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms