RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 POLR3AO14802 1390 aaPredicted RBP16.27■□□□□ 0.19
UBA3-203ENST00000415609 APAF1O14727 1248 aa16.26■□□□□ 0.19
UBA3-203ENST00000415609 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
UBA3-203ENST00000415609 CRBNQ96SW2 442 aa16.25■□□□□ 0.19
UBA3-203ENST00000415609 SAFB2Q14151 953 aaKnown RBP eCLIP16.24■□□□□ 0.19
UBA3-203ENST00000415609 STK26Q9P289 416 aa16.24■□□□□ 0.19
UBA3-203ENST00000415609 CGNL1Q0VF96 1302 aa16.24■□□□□ 0.19
UBA3-203ENST00000415609 SLFN5Q08AF3 891 aa16.24■□□□□ 0.19
UBA3-203ENST00000415609 PUS7Q96PZ0 661 aaKnown RBP16.24■□□□□ 0.19
UBA3-203ENST00000415609 FBXO31Q5XUX0 539 aaPredicted RBP16.23■□□□□ 0.19
UBA3-203ENST00000415609 CABP2Q9NPB3 220 aa16.23■□□□□ 0.19
UBA3-203ENST00000415609 ANKRD36BQ8N2N9 1353 aa16.22■□□□□ 0.19
UBA3-203ENST00000415609 SHPRHQ149N8 1683 aa16.22■□□□□ 0.19
UBA3-203ENST00000415609 REREQ9P2R6 1566 aa16.21■□□□□ 0.19
UBA3-203ENST00000415609 ERICH6Q7L0X2 663 aa16.21■□□□□ 0.18
UBA3-203ENST00000415609 C20orf194Q5TEA3 1177 aa16.2■□□□□ 0.18
UBA3-203ENST00000415609 STAG3Q9UJ98 1225 aa16.2■□□□□ 0.18
UBA3-203ENST00000415609 CLTCQ00610 1675 aaKnown RBP16.19■□□□□ 0.18
UBA3-203ENST00000415609 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
UBA3-203ENST00000415609 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.19■□□□□ 0.18
UBA3-203ENST00000415609 PTPRMP28827 1452 aa16.19■□□□□ 0.18
UBA3-203ENST00000415609 NKTRP30414 1462 aaKnown RBP16.19■□□□□ 0.18
UBA3-203ENST00000415609 NSD2O96028 1365 aa16.19■□□□□ 0.18
UBA3-203ENST00000415609 SRPK2P78362 688 aaKnown RBP16.19■□□□□ 0.18
UBA3-203ENST00000415609 TRMT2AQ8IZ69 625 aaKnown RBP16.19■□□□□ 0.18
UBA3-203ENST00000415609 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
UBA3-203ENST00000415609 AGLP35573 1532 aa16.19■□□□□ 0.18
UBA3-203ENST00000415609 E9PSI1 815 aa16.18■□□□□ 0.18
UBA3-203ENST00000415609 YTHDC2Q9H6S0 1430 aaKnown RBP16.18■□□□□ 0.18
UBA3-203ENST00000415609 CFAP53Q96M91 514 aa16.18■□□□□ 0.18
UBA3-203ENST00000415609 MTHFSP49914 203 aa16.17■□□□□ 0.18
UBA3-203ENST00000415609 PRAM1Q96QH2 718 aa16.17■□□□□ 0.18
UBA3-203ENST00000415609 POGKQ9P215 609 aa16.17■□□□□ 0.18
UBA3-203ENST00000415609 NINLQ9Y2I6 1382 aa16.17■□□□□ 0.18
UBA3-203ENST00000415609 MINK1Q8N4C8 1332 aaPredicted RBP16.16■□□□□ 0.18
UBA3-203ENST00000415609 ALKQ9UM73 1620 aa16.16■□□□□ 0.18
UBA3-203ENST00000415609 TCERG1O14776 1098 aaKnown RBP16.16■□□□□ 0.18
UBA3-203ENST00000415609 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
UBA3-203ENST00000415609 A0A1W2PP64 1363 aa16.15■□□□□ 0.18
UBA3-203ENST00000415609 RUNDC1Q96C34 613 aa16.15■□□□□ 0.18
UBA3-203ENST00000415609 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
UBA3-203ENST00000415609 ATAD2Q6PL18 1390 aa16.14■□□□□ 0.17
UBA3-203ENST00000415609 MLECQ14165 292 aa16.14■□□□□ 0.17
UBA3-203ENST00000415609 WWC1Q8IX03 1113 aa16.14■□□□□ 0.17
UBA3-203ENST00000415609 IQSEC2Q5JU85 1478 aa16.13■□□□□ 0.17
UBA3-203ENST00000415609 ABCC11Q96J66 1382 aa16.13■□□□□ 0.17
UBA3-203ENST00000415609 SPATA31D1Q6ZQQ2 1576 aa16.13■□□□□ 0.17
UBA3-203ENST00000415609 ANP32AP39687 249 aaKnown RBP16.12■□□□□ 0.17
UBA3-203ENST00000415609 NEUROD2Q15784 382 aa16.12■□□□□ 0.17
UBA3-203ENST00000415609 RRP7AQ9Y3A4 280 aaKnown RBP16.12■□□□□ 0.17
UBA3-203ENST00000415609 A2ML1A8K2U0 1454 aa16.12■□□□□ 0.17
UBA3-203ENST00000415609 TCP11L2Q8N4U5 519 aa16.11■□□□□ 0.17
UBA3-203ENST00000415609 ARHGEF40Q8TER5 1519 aa16.11■□□□□ 0.17
UBA3-203ENST00000415609 TERF2IPQ9NYB0 399 aa16.11■□□□□ 0.17
UBA3-203ENST00000415609 BCAR3O75815 825 aa16.1■□□□□ 0.17
UBA3-203ENST00000415609 RIMS2Q9UQ26 1411 aa16.1■□□□□ 0.17
UBA3-203ENST00000415609 MS4A1P11836 297 aa16.09■□□□□ 0.17
UBA3-203ENST00000415609 GGNBP2Q9H3C7 697 aa16.09■□□□□ 0.17
UBA3-203ENST00000415609 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.16
UBA3-203ENST00000415609 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.16
UBA3-203ENST00000415609 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.16
UBA3-203ENST00000415609 CD163L1Q9NR16 1453 aa16.08■□□□□ 0.16
UBA3-203ENST00000415609 CDK19Q9BWU1 502 aa16.07■□□□□ 0.16
UBA3-203ENST00000415609 KDM2BQ8NHM5 1336 aa16.07■□□□□ 0.16
UBA3-203ENST00000415609 PDE4AP27815 886 aa16.07■□□□□ 0.16
UBA3-203ENST00000415609 CENPQQ7L2Z9 268 aaPredicted RBP16.07■□□□□ 0.16
UBA3-203ENST00000415609 HDGFL2Q7Z4V5 671 aaPredicted RBP16.07■□□□□ 0.16
UBA3-203ENST00000415609 NOP58Q9Y2X3 529 aaKnown RBP16.07■□□□□ 0.16
UBA3-203ENST00000415609 KIF13AQ9H1H9 1805 aa16.06■□□□□ 0.16
UBA3-203ENST00000415609 ESF1Q9H501 851 aaKnown RBP16.06■□□□□ 0.16
UBA3-203ENST00000415609 DLC1Q96QB1 1528 aa16.06■□□□□ 0.16
UBA3-203ENST00000415609 CANXP27824 592 aaKnown RBP16.06■□□□□ 0.16
UBA3-203ENST00000415609 SKAP1Q86WV1 359 aa16.06■□□□□ 0.16
UBA3-203ENST00000415609 SETD1AO15047 1707 aaKnown RBP16.05■□□□□ 0.16
UBA3-203ENST00000415609 MED14O60244 1454 aa16.05■□□□□ 0.16
UBA3-203ENST00000415609 WDR63Q8IWG1 891 aa16.05■□□□□ 0.16
UBA3-203ENST00000415609 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
UBA3-203ENST00000415609 FYB1O15117 783 aa16.04■□□□□ 0.16
UBA3-203ENST00000415609 NLRP1Q9C000 1473 aa16.04■□□□□ 0.16
UBA3-203ENST00000415609 KIF20BQ96Q89 1820 aa16.04■□□□□ 0.16
UBA3-203ENST00000415609 U2SURPO15042 1029 aaKnown RBP16.04■□□□□ 0.16
UBA3-203ENST00000415609 CCDC27Q2M243 656 aa16.04■□□□□ 0.16
UBA3-203ENST00000415609 IPO9Q96P70 1041 aaKnown RBP16.04■□□□□ 0.16
UBA3-203ENST00000415609 BACH2Q9BYV9 841 aa16.04■□□□□ 0.16
UBA3-203ENST00000415609 CABP1Q9NZU7 370 aa16.04■□□□□ 0.16
UBA3-203ENST00000415609 ADGRB2O60241 1585 aa16.04■□□□□ 0.16
UBA3-203ENST00000415609 WAPLQ7Z5K2 1190 aa16.03■□□□□ 0.16
UBA3-203ENST00000415609 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
UBA3-203ENST00000415609 COL3A1P02461 1466 aaPredicted RBP16.02■□□□□ 0.16
UBA3-203ENST00000415609 PDE3AQ14432 1141 aa16.01■□□□□ 0.15
UBA3-203ENST00000415609 ZMYM3Q14202 1370 aa16.01■□□□□ 0.15
UBA3-203ENST00000415609 NRXN3Q9Y4C0 1643 aa16.01■□□□□ 0.15
UBA3-203ENST00000415609 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBA3-203ENST00000415609 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
UBA3-203ENST00000415609 FRAT1Q92837 279 aaPredicted RBP16■□□□□ 0.15
UBA3-203ENST00000415609 MYH16Q9H6N6 1097 aa16■□□□□ 0.15
UBA3-203ENST00000415609 ATP7BP35670 1465 aa16■□□□□ 0.15
UBA3-203ENST00000415609 PAK3O75914 559 aaPredicted RBP15.99■□□□□ 0.15
UBA3-203ENST00000415609 MAPK8IP3Q9UPT6 1336 aa15.99■□□□□ 0.15
UBA3-203ENST00000415609 RARSP54136 660 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms