RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PANK3Q9H999 370 aa15.67■□□□□ 0.1
RFFL-205ENST00000415395 STK26Q9P289 416 aa15.66■□□□□ 0.1
RFFL-205ENST00000415395 METP08581 1390 aa15.66■□□□□ 0.1
RFFL-205ENST00000415395 NINLQ9Y2I6 1382 aa15.65■□□□□ 0.1
RFFL-205ENST00000415395 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
RFFL-205ENST00000415395 POGKQ9P215 609 aa15.65■□□□□ 0.1
RFFL-205ENST00000415395 NPC1L1Q9UHC9 1359 aa15.65■□□□□ 0.1
RFFL-205ENST00000415395 PARD3Q8TEW0 1356 aa15.64■□□□□ 0.09
RFFL-205ENST00000415395 PRAM1Q96QH2 718 aa15.64■□□□□ 0.09
RFFL-205ENST00000415395 TBX22Q9Y458 520 aa15.63■□□□□ 0.09
RFFL-205ENST00000415395 ATAD2Q6PL18 1390 aa15.62■□□□□ 0.09
RFFL-205ENST00000415395 HNRNPUQ00839 825 aaKnown RBP eCLIP15.62■□□□□ 0.09
RFFL-205ENST00000415395 USP32Q8NFA0 1604 aa15.62■□□□□ 0.09
RFFL-205ENST00000415395 PIK3R4Q99570 1358 aa15.61■□□□□ 0.09
RFFL-205ENST00000415395 KNSTRNQ9Y448 316 aa15.61■□□□□ 0.09
RFFL-205ENST00000415395 MYBBP1AQ9BQG0 1328 aaKnown RBP15.6■□□□□ 0.09
RFFL-205ENST00000415395 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
RFFL-205ENST00000415395 ADGRB2O60241 1585 aa15.6■□□□□ 0.09
RFFL-205ENST00000415395 XRN1Q8IZH2 1706 aaKnown RBP15.59■□□□□ 0.09
RFFL-205ENST00000415395 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
RFFL-205ENST00000415395 BRD4O60885 1362 aaPredicted RBP15.59■□□□□ 0.09
RFFL-205ENST00000415395 ANKLE2Q86XL3 938 aa15.58■□□□□ 0.08
RFFL-205ENST00000415395 AMER1Q5JTC6 1135 aaPredicted RBP15.57■□□□□ 0.08
RFFL-205ENST00000415395 MRS2Q9HD23 443 aa15.57■□□□□ 0.08
RFFL-205ENST00000415395 ANKRD36BQ8N2N9 1353 aa15.57■□□□□ 0.08
RFFL-205ENST00000415395 MINK1Q8N4C8 1332 aaPredicted RBP15.57■□□□□ 0.08
RFFL-205ENST00000415395 SAFB2Q14151 953 aaKnown RBP eCLIP15.57■□□□□ 0.08
RFFL-205ENST00000415395 RBM19Q9Y4C8 960 aaKnown RBP15.57■□□□□ 0.08
RFFL-205ENST00000415395 PLEKHH1Q9ULM0 1364 aa15.56■□□□□ 0.08
RFFL-205ENST00000415395 PTPRUQ92729 1446 aa15.55■□□□□ 0.08
RFFL-205ENST00000415395 SRPK2P78362 688 aaKnown RBP15.55■□□□□ 0.08
RFFL-205ENST00000415395 NLRP13Q86W25 1043 aa15.55■□□□□ 0.08
RFFL-205ENST00000415395 WAPLQ7Z5K2 1190 aa15.54■□□□□ 0.08
RFFL-205ENST00000415395 CABP2Q9NPB3 220 aa15.54■□□□□ 0.08
RFFL-205ENST00000415395 CHD2O14647 1828 aaKnown RBP15.54■□□□□ 0.08
RFFL-205ENST00000415395 ROBO2Q9HCK4 1378 aa15.54■□□□□ 0.08
RFFL-205ENST00000415395 TMC1Q8TDI8 760 aa15.54■□□□□ 0.08
RFFL-205ENST00000415395 SLC26A8Q96RN1 970 aa15.54■□□□□ 0.08
RFFL-205ENST00000415395 CDK19Q9BWU1 502 aa15.54■□□□□ 0.08
RFFL-205ENST00000415395 SLC12A5Q9H2X9 1139 aa15.53■□□□□ 0.08
RFFL-205ENST00000415395 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.53■□□□□ 0.08
RFFL-205ENST00000415395 ATP7BP35670 1465 aa15.53■□□□□ 0.08
RFFL-205ENST00000415395 NSD2O96028 1365 aa15.52■□□□□ 0.08
RFFL-205ENST00000415395 WASLO00401 505 aaPredicted RBP15.52■□□□□ 0.08
RFFL-205ENST00000415395 CCDC184Q52MB2 194 aa15.52■□□□□ 0.08
RFFL-205ENST00000415395 CC2D1BQ5T0F9 858 aaKnown RBP15.52■□□□□ 0.08
RFFL-205ENST00000415395 CARD14Q9BXL6 1004 aa15.52■□□□□ 0.08
RFFL-205ENST00000415395 NSD3Q9BZ95 1437 aa15.52■□□□□ 0.08
RFFL-205ENST00000415395 NPHP4O75161 1426 aaPredicted RBP15.51■□□□□ 0.07
RFFL-205ENST00000415395 AMOTL2Q9Y2J4 779 aa15.51■□□□□ 0.07
RFFL-205ENST00000415395 ZBED9Q6R2W3 1325 aa15.51■□□□□ 0.07
RFFL-205ENST00000415395 PPP4R2Q9NY27 417 aa15.5■□□□□ 0.07
RFFL-205ENST00000415395 TERF2IPQ9NYB0 399 aa15.5■□□□□ 0.07
RFFL-205ENST00000415395 ANKRD26Q9UPS8 1709 aa15.49■□□□□ 0.07
RFFL-205ENST00000415395 CGNL1Q0VF96 1302 aa15.49■□□□□ 0.07
RFFL-205ENST00000415395 TOPAZ1Q8N9V7 1692 aa15.49■□□□□ 0.07
RFFL-205ENST00000415395 CD163L1Q9NR16 1453 aa15.49■□□□□ 0.07
RFFL-205ENST00000415395 CNGB1Q14028 1251 aaPredicted RBP15.48■□□□□ 0.07
RFFL-205ENST00000415395 FANCIQ9NVI1 1328 aa15.48■□□□□ 0.07
RFFL-205ENST00000415395 A0A1W2PP64 1363 aa15.48■□□□□ 0.07
RFFL-205ENST00000415395 ITSN1Q15811 1721 aa15.47■□□□□ 0.07
RFFL-205ENST00000415395 HDGFL2Q7Z4V5 671 aaPredicted RBP15.47■□□□□ 0.07
RFFL-205ENST00000415395 PNISRQ8TF01 805 aaKnown RBP15.47■□□□□ 0.07
RFFL-205ENST00000415395 INSRP06213 1382 aa15.47■□□□□ 0.07
RFFL-205ENST00000415395 NWD1Q149M9 1564 aa15.47■□□□□ 0.07
RFFL-205ENST00000415395 AKAP12Q02952 1782 aa15.47■□□□□ 0.07
RFFL-205ENST00000415395 CDC42BPGQ6DT37 1551 aa15.46■□□□□ 0.07
RFFL-205ENST00000415395 KIF20BQ96Q89 1820 aa15.46■□□□□ 0.07
RFFL-205ENST00000415395 MON2Q7Z3U7 1717 aa15.46■□□□□ 0.06
RFFL-205ENST00000415395 PPIP5K1Q6PFW1 1433 aa15.45■□□□□ 0.06
RFFL-205ENST00000415395 PPP2R1AP30153 589 aa15.45■□□□□ 0.06
RFFL-205ENST00000415395 FAM9BQ8IZU0 186 aa15.45■□□□□ 0.06
RFFL-205ENST00000415395 CPSF1Q10570 1443 aaKnown RBP15.44■□□□□ 0.06
RFFL-205ENST00000415395 CCDC61Q9Y6R9 512 aa15.44■□□□□ 0.06
RFFL-205ENST00000415395 NUDT16Q96DE0 195 aaKnown RBP15.43■□□□□ 0.06
RFFL-205ENST00000415395 CABP1Q9NZU7 370 aa15.43■□□□□ 0.06
RFFL-205ENST00000415395 KDM4FA0A1W2PPD8 638 aa15.42■□□□□ 0.06
RFFL-205ENST00000415395 KCNA6P17658 529 aa15.42■□□□□ 0.06
RFFL-205ENST00000415395 ERICH6Q7L0X2 663 aa15.42■□□□□ 0.06
RFFL-205ENST00000415395 FMN2Q9NZ56 1722 aa15.42■□□□□ 0.06
RFFL-205ENST00000415395 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
RFFL-205ENST00000415395 ANKARQ7Z5J8 1434 aa15.41■□□□□ 0.06
RFFL-205ENST00000415395 NALCNQ8IZF0 1738 aa15.41■□□□□ 0.06
RFFL-205ENST00000415395 MORC1Q86VD1 984 aa15.4■□□□□ 0.06
RFFL-205ENST00000415395 NKTRP30414 1462 aaKnown RBP15.39■□□□□ 0.05
RFFL-205ENST00000415395 NCKAP5LQ9HCH0 1330 aa15.39■□□□□ 0.05
RFFL-205ENST00000415395 ZNF692Q9BU19 519 aaPredicted RBP15.39■□□□□ 0.05
RFFL-205ENST00000415395 PRR36Q9H6K5 1346 aa15.38■□□□□ 0.05
RFFL-205ENST00000415395 NRKQ7Z2Y5 1582 aa15.38■□□□□ 0.05
RFFL-205ENST00000415395 PLEKHG3A1L390 1219 aa15.38■□□□□ 0.05
RFFL-205ENST00000415395 POLR3AO14802 1390 aaPredicted RBP15.38■□□□□ 0.05
RFFL-205ENST00000415395 LMTK3Q96Q04 1460 aa15.37■□□□□ 0.05
RFFL-205ENST00000415395 SMG6Q86US8 1419 aaKnown RBP15.37■□□□□ 0.05
RFFL-205ENST00000415395 ADGRL3Q9HAR2 1447 aa15.37■□□□□ 0.05
RFFL-205ENST00000415395 RGPD8O14715 1765 aaPredicted RBP15.36■□□□□ 0.05
RFFL-205ENST00000415395 BLMP54132 1417 aaPredicted RBP15.36■□□□□ 0.05
RFFL-205ENST00000415395 FYB1O15117 783 aa15.35■□□□□ 0.05
RFFL-205ENST00000415395 IRX6P78412 446 aaPredicted RBP15.33■□□□□ 0.04
RFFL-205ENST00000415395 STRCQ7RTU9 1775 aa15.33■□□□□ 0.04
RFFL-205ENST00000415395 NCOA3Q9Y6Q9 1424 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms