RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 RUSC2Q8N2Y8 1516 aa13.76□□□□□ -0.21
TRA2B-204ENST00000414862 MS4A1P11836 297 aa13.75□□□□□ -0.21
TRA2B-204ENST00000414862 SAMD7Q7Z3H4 446 aa13.75□□□□□ -0.21
TRA2B-204ENST00000414862 GOLGA8CPA6NN73 597 aa13.74□□□□□ -0.21
TRA2B-204ENST00000414862 FAM117AQ9C073 453 aa13.74□□□□□ -0.21
TRA2B-204ENST00000414862 ADCY10Q96PN6 1610 aa13.72□□□□□ -0.21
TRA2B-204ENST00000414862 DDX11L8A8MPP1 907 aa13.72□□□□□ -0.21
TRA2B-204ENST00000414862 SULF1Q8IWU6 871 aa13.72□□□□□ -0.21
TRA2B-204ENST00000414862 IL27Q8NEV9 243 aa13.72□□□□□ -0.21
TRA2B-204ENST00000414862 SLC4A3P48751 1232 aa13.7□□□□□ -0.22
TRA2B-204ENST00000414862 DDRGK1Q96HY6 314 aa13.7□□□□□ -0.22
TRA2B-204ENST00000414862 ANKK1Q8NFD2 765 aa13.69□□□□□ -0.22
TRA2B-204ENST00000414862 SLF2Q8IX21 1173 aa13.68□□□□□ -0.22
TRA2B-204ENST00000414862 LRCH3Q96II8 777 aa13.68□□□□□ -0.22
TRA2B-204ENST00000414862 BEGAINQ9BUH8 593 aa13.68□□□□□ -0.22
TRA2B-204ENST00000414862 PCDH10Q9P2E7 1040 aa13.68□□□□□ -0.22
TRA2B-204ENST00000414862 CD46P15529 392 aa13.67□□□□□ -0.22
TRA2B-204ENST00000414862 RDH13Q8NBN7 331 aa13.67□□□□□ -0.22
TRA2B-204ENST00000414862 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.67□□□□□ -0.22
TRA2B-204ENST00000414862 RNF40O75150 1001 aa13.66□□□□□ -0.22
TRA2B-204ENST00000414862 TMEM132AQ24JP5 1023 aa13.66□□□□□ -0.22
TRA2B-204ENST00000414862 RSPH4AQ5TD94 716 aa13.66□□□□□ -0.22
TRA2B-204ENST00000414862 WNT2BQ93097 391 aa13.66□□□□□ -0.22
TRA2B-204ENST00000414862 PLEKHG3A1L390 1219 aa13.65□□□□□ -0.22
TRA2B-204ENST00000414862 KIAA0586Q9BVV6 1533 aa13.64□□□□□ -0.23
TRA2B-204ENST00000414862 SUPT5HO00267 1087 aaKnown RBP13.64□□□□□ -0.23
TRA2B-204ENST00000414862 SLC10A3P09131 477 aa13.64□□□□□ -0.23
TRA2B-204ENST00000414862 SOWAHBA6NEL2 793 aa13.63□□□□□ -0.23
TRA2B-204ENST00000414862 BCAMP50895 628 aa13.62□□□□□ -0.23
TRA2B-204ENST00000414862 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
TRA2B-204ENST00000414862 ADGRL1O94910 1474 aa13.61□□□□□ -0.23
TRA2B-204ENST00000414862 KCTD12Q96CX2 325 aaKnown RBP13.6□□□□□ -0.23
TRA2B-204ENST00000414862 PTPRGP23470 1445 aa13.59□□□□□ -0.23
TRA2B-204ENST00000414862 GCGRP47871 477 aa13.58□□□□□ -0.24
TRA2B-204ENST00000414862 NECTIN2Q92692 538 aa13.58□□□□□ -0.24
TRA2B-204ENST00000414862 HPS5Q9UPZ3 1129 aa13.58□□□□□ -0.24
TRA2B-204ENST00000414862 ABCC2Q92887 1545 aa13.58□□□□□ -0.24
TRA2B-204ENST00000414862 PLB1Q6P1J6 1458 aa13.57□□□□□ -0.24
TRA2B-204ENST00000414862 PPP4CP60510 307 aa13.57□□□□□ -0.24
TRA2B-204ENST00000414862 CUL7Q14999 1698 aa13.56□□□□□ -0.24
TRA2B-204ENST00000414862 ASXL2Q76L83 1435 aa13.56□□□□□ -0.24
TRA2B-204ENST00000414862 CFHP08603 1231 aa13.56□□□□□ -0.24
TRA2B-204ENST00000414862 THSD4Q6ZMP0 1018 aa13.56□□□□□ -0.24
TRA2B-204ENST00000414862 NUTM1Q86Y26 1132 aa13.56□□□□□ -0.24
TRA2B-204ENST00000414862 TSR3Q9UJK0 312 aaKnown RBP13.56□□□□□ -0.24
TRA2B-204ENST00000414862 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
TRA2B-204ENST00000414862 CARMIL2Q6F5E8 1435 aa13.56□□□□□ -0.24
TRA2B-204ENST00000414862 KIF27Q86VH2 1401 aa13.56□□□□□ -0.24
TRA2B-204ENST00000414862 SPIRE2Q8WWL2 714 aa13.55□□□□□ -0.24
TRA2B-204ENST00000414862 TBC1D2Q9BYX2 928 aa13.55□□□□□ -0.24
TRA2B-204ENST00000414862 RSPH6AQ9H0K4 717 aa13.55□□□□□ -0.24
TRA2B-204ENST00000414862 TTBK1Q5TCY1 1321 aaPredicted RBP13.55□□□□□ -0.24
TRA2B-204ENST00000414862 TNIKQ9UKE5 1360 aa13.55□□□□□ -0.24
TRA2B-204ENST00000414862 GLI2P10070 1586 aa13.54□□□□□ -0.24
TRA2B-204ENST00000414862 DIXDC1Q155Q3 683 aa13.54□□□□□ -0.24
TRA2B-204ENST00000414862 KDM4AO75164 1064 aa13.53□□□□□ -0.24
TRA2B-204ENST00000414862 KMT5BQ4FZB7 885 aa13.52□□□□□ -0.25
TRA2B-204ENST00000414862 SPNS2Q8IVW8 549 aa13.52□□□□□ -0.25
TRA2B-204ENST00000414862 IGF1RP08069 1367 aa13.52□□□□□ -0.25
TRA2B-204ENST00000414862 HECW2Q9P2P5 1572 aa13.52□□□□□ -0.25
TRA2B-204ENST00000414862 TEX14Q8IWB6 1497 aa13.51□□□□□ -0.25
TRA2B-204ENST00000414862 WBP1LQ9NX94 342 aa13.51□□□□□ -0.25
TRA2B-204ENST00000414862 PPRC1Q5VV67 1664 aaKnown RBP13.5□□□□□ -0.25
TRA2B-204ENST00000414862 UHRF1BP1LA0JNW5 1464 aa13.5□□□□□ -0.25
TRA2B-204ENST00000414862 SH3D19Q5HYK7 790 aa13.5□□□□□ -0.25
TRA2B-204ENST00000414862 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
TRA2B-204ENST00000414862 GOPCQ9HD26 462 aa13.5□□□□□ -0.25
TRA2B-204ENST00000414862 USP46P62068 366 aa13.49□□□□□ -0.25
TRA2B-204ENST00000414862 FUT2Q10981 343 aa13.48□□□□□ -0.25
TRA2B-204ENST00000414862 SKIV2LQ15477 1246 aaKnown RBP13.48□□□□□ -0.25
TRA2B-204ENST00000414862 PRR14Q9BWN1 585 aa13.48□□□□□ -0.25
TRA2B-204ENST00000414862 POLR3EQ9NVU0 708 aa13.48□□□□□ -0.25
TRA2B-204ENST00000414862 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
TRA2B-204ENST00000414862 IQGAP2Q13576 1575 aa13.47□□□□□ -0.25
TRA2B-204ENST00000414862 PTPN5P54829 565 aa13.47□□□□□ -0.25
TRA2B-204ENST00000414862 EPRSP07814 1512 aaKnown RBP13.47□□□□□ -0.25
TRA2B-204ENST00000414862 MOXD2PA6NHM9 499 aa13.46□□□□□ -0.25
TRA2B-204ENST00000414862 ACTN4O43707 911 aaKnown RBP13.46□□□□□ -0.25
TRA2B-204ENST00000414862 APLP1P51693 650 aa13.46□□□□□ -0.25
TRA2B-204ENST00000414862 CARMIL1Q5VZK9 1371 aa13.45□□□□□ -0.26
TRA2B-204ENST00000414862 COL17A1Q9UMD9 1497 aaPredicted RBP13.45□□□□□ -0.26
TRA2B-204ENST00000414862 PCMTD1Q96MG8 357 aaPredicted RBP13.45□□□□□ -0.26
TRA2B-204ENST00000414862 MAP3K4Q9Y6R4 1608 aa13.44□□□□□ -0.26
TRA2B-204ENST00000414862 HOXA2O43364 376 aa13.44□□□□□ -0.26
TRA2B-204ENST00000414862 NDUFV2P19404 249 aa13.44□□□□□ -0.26
TRA2B-204ENST00000414862 ATP6V1AP38606 617 aa13.44□□□□□ -0.26
TRA2B-204ENST00000414862 GRIPAP1Q4V328 841 aa13.44□□□□□ -0.26
TRA2B-204ENST00000414862 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
TRA2B-204ENST00000414862 RNF166Q96A37 237 aaPredicted RBP13.44□□□□□ -0.26
TRA2B-204ENST00000414862 ATP1B4Q9UN42 357 aaPredicted RBP13.44□□□□□ -0.26
TRA2B-204ENST00000414862 CLK2P49760 499 aaKnown RBP13.43□□□□□ -0.26
TRA2B-204ENST00000414862 KDM5BQ9UGL1 1544 aa13.43□□□□□ -0.26
TRA2B-204ENST00000414862 SPTLC1O15269 473 aa13.42□□□□□ -0.26
TRA2B-204ENST00000414862 RSBN1LQ6PCB5 846 aaPredicted RBP13.42□□□□□ -0.26
TRA2B-204ENST00000414862 NYAP1Q6ZVC0 841 aa13.41□□□□□ -0.26
TRA2B-204ENST00000414862 PROCA1Q8NCQ7 364 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-204ENST00000414862 LIMD1Q9UGP4 676 aa13.41□□□□□ -0.26
TRA2B-204ENST00000414862 DISP1Q96F81 1524 aa13.4□□□□□ -0.26
TRA2B-204ENST00000414862 PUS10Q3MIT2 529 aaKnown RBP13.4□□□□□ -0.26
TRA2B-204ENST00000414862 HLA-CQ95604 372 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms