RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ECM2O94769 699 aaPredicted RBP22.3■■□□□ 1.16
SHANK3-202ENST00000414786 TEX35Q5T0J7 233 aa22.29■■□□□ 1.16
SHANK3-202ENST00000414786 ENOX2Q16206 610 aaKnown RBP22.28■■□□□ 1.16
SHANK3-202ENST00000414786 OLFM4Q6UX06 510 aa22.28■■□□□ 1.16
SHANK3-202ENST00000414786 CRBNQ96SW2 442 aa22.28■■□□□ 1.16
SHANK3-202ENST00000414786 CA8P35219 290 aa22.27■■□□□ 1.16
SHANK3-202ENST00000414786 DDX54Q8TDD1 881 aaKnown RBP22.27■■□□□ 1.16
SHANK3-202ENST00000414786 RIPK4P57078 832 aa22.27■■□□□ 1.16
SHANK3-202ENST00000414786 IPO9Q96P70 1041 aaKnown RBP22.27■■□□□ 1.16
SHANK3-202ENST00000414786 H0YHG0 523 aa22.26■■□□□ 1.15
SHANK3-202ENST00000414786 SEPT7Q16181 437 aaKnown RBP22.26■■□□□ 1.15
SHANK3-202ENST00000414786 CDR1P51861 262 aa22.26■■□□□ 1.15
SHANK3-202ENST00000414786 RNF20Q5VTR2 975 aa22.26■■□□□ 1.15
SHANK3-202ENST00000414786 TANGO6Q9C0B7 1094 aa22.26■■□□□ 1.15
SHANK3-202ENST00000414786 CENPHQ9H3R5 247 aa22.25■■□□□ 1.15
SHANK3-202ENST00000414786 SMC2O95347 1197 aa22.25■■□□□ 1.15
SHANK3-202ENST00000414786 SSR1P43307 286 aaKnown RBP22.25■■□□□ 1.15
SHANK3-202ENST00000414786 ZNF219Q9P2Y4 722 aaPredicted RBP22.25■■□□□ 1.15
SHANK3-202ENST00000414786 WDR78Q5VTH9 848 aa22.25■■□□□ 1.15
SHANK3-202ENST00000414786 CCDC73Q6ZRK6 1079 aa22.24■■□□□ 1.15
SHANK3-202ENST00000414786 MAP4K4O95819 1239 aaPredicted RBP22.24■■□□□ 1.15
SHANK3-202ENST00000414786 TAX1BP1Q86VP1 789 aa22.24■■□□□ 1.15
SHANK3-202ENST00000414786 TMEM87AQ8NBN3 555 aa22.24■■□□□ 1.15
SHANK3-202ENST00000414786 CNNM1Q9NRU3 951 aa22.24■■□□□ 1.15
SHANK3-202ENST00000414786 HSP90AB3PQ58FF7 597 aa22.23■■□□□ 1.15
SHANK3-202ENST00000414786 ZKSCAN2Q63HK3 967 aa22.23■■□□□ 1.15
SHANK3-202ENST00000414786 RNF214Q8ND24 703 aa22.23■■□□□ 1.15
SHANK3-202ENST00000414786 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
SHANK3-202ENST00000414786 STK3Q13188 491 aa22.22■■□□□ 1.15
SHANK3-202ENST00000414786 SSBP05455 408 aaKnown RBP eCLIP22.22■■□□□ 1.15
SHANK3-202ENST00000414786 CGNL1Q0VF96 1302 aa22.22■■□□□ 1.15
SHANK3-202ENST00000414786 MPNDQ8N594 471 aa22.22■■□□□ 1.15
SHANK3-202ENST00000414786 LNPKQ9C0E8 428 aa22.21■■□□□ 1.15
SHANK3-202ENST00000414786 SDF4Q9BRK5 362 aa22.21■■□□□ 1.15
SHANK3-202ENST00000414786 RDXP35241 583 aaKnown RBP22.21■■□□□ 1.15
SHANK3-202ENST00000414786 CCDC191Q8NCU4 936 aa22.21■■□□□ 1.15
SHANK3-202ENST00000414786 TRMT1LQ7Z2T5 733 aaKnown RBP22.21■■□□□ 1.15
SHANK3-202ENST00000414786 TTLL12Q14166 644 aaPredicted RBP22.2■■□□□ 1.15
SHANK3-202ENST00000414786 MAGEC2Q9UBF1 373 aaPredicted RBP22.2■■□□□ 1.15
SHANK3-202ENST00000414786 TSPYL1Q9H0U9 437 aa22.2■■□□□ 1.14
SHANK3-202ENST00000414786 FSD1Q9BTV5 496 aa22.2■■□□□ 1.14
SHANK3-202ENST00000414786 EXOC6Q8TAG9 804 aa22.2■■□□□ 1.14
SHANK3-202ENST00000414786 SIL1Q9H173 461 aa22.2■■□□□ 1.14
SHANK3-202ENST00000414786 XBP1P17861 261 aa22.19■■□□□ 1.14
SHANK3-202ENST00000414786 FAM177A1Q8N128 213 aaPredicted RBP22.19■■□□□ 1.14
SHANK3-202ENST00000414786 SCLT1Q96NL6 688 aa22.19■■□□□ 1.14
SHANK3-202ENST00000414786 TTC39AQ5SRH9 613 aa22.19■■□□□ 1.14
SHANK3-202ENST00000414786 NUP133Q8WUM0 1156 aa22.18■■□□□ 1.14
SHANK3-202ENST00000414786 CCDC85AQ96PX6 553 aaPredicted RBP22.18■■□□□ 1.14
SHANK3-202ENST00000414786 AXDND1Q5T1B0 1012 aaPredicted RBP22.18■■□□□ 1.14
SHANK3-202ENST00000414786 HSP90B2PQ58FF3 399 aa22.18■■□□□ 1.14
SHANK3-202ENST00000414786 APAF1O14727 1248 aa22.18■■□□□ 1.14
SHANK3-202ENST00000414786 PODXL2Q9NZ53 605 aa22.18■■□□□ 1.14
SHANK3-202ENST00000414786 USP5P45974 858 aa22.17■■□□□ 1.14
SHANK3-202ENST00000414786 FAM193AP78312 1265 aa22.17■■□□□ 1.14
SHANK3-202ENST00000414786 ESCO1Q5FWF5 840 aa22.17■■□□□ 1.14
SHANK3-202ENST00000414786 EEA1Q15075 1411 aa22.17■■□□□ 1.14
SHANK3-202ENST00000414786 HSP90AB4PQ58FF6 505 aa22.17■■□□□ 1.14
SHANK3-202ENST00000414786 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
SHANK3-202ENST00000414786 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
SHANK3-202ENST00000414786 TBC1D2BQ9UPU7 963 aa22.16■■□□□ 1.14
SHANK3-202ENST00000414786 DIAPH1O60610 1272 aaKnown RBP22.16■■□□□ 1.14
SHANK3-202ENST00000414786 SPC24Q8NBT2 197 aa22.15■■□□□ 1.14
SHANK3-202ENST00000414786 MYL6BP14649 208 aa22.15■■□□□ 1.14
SHANK3-202ENST00000414786 REC8O95072 547 aa22.14■■□□□ 1.14
SHANK3-202ENST00000414786 ARHGAP35Q9NRY4 1499 aa22.14■■□□□ 1.13
SHANK3-202ENST00000414786 HMGN5P82970 282 aaKnown RBP22.13■■□□□ 1.13
SHANK3-202ENST00000414786 CUX2O14529 1486 aa22.13■■□□□ 1.13
SHANK3-202ENST00000414786 ST20-MTHFSA0A0A6YYL1 179 aa22.12■■□□□ 1.13
SHANK3-202ENST00000414786 LIG1P18858 919 aa22.12■■□□□ 1.13
SHANK3-202ENST00000414786 EVC2Q86UK5 1308 aa22.12■■□□□ 1.13
SHANK3-202ENST00000414786 ZNF76P36508 570 aa22.12■■□□□ 1.13
SHANK3-202ENST00000414786 SART3Q15020 963 aaKnown RBP22.11■■□□□ 1.13
SHANK3-202ENST00000414786 KANK4Q5T7N3 995 aaPredicted RBP22.11■■□□□ 1.13
SHANK3-202ENST00000414786 DEF6Q9H4E7 631 aa22.11■■□□□ 1.13
SHANK3-202ENST00000414786 DCTN1Q14203 1278 aa22.11■■□□□ 1.13
SHANK3-202ENST00000414786 ZRSR2Q15696 482 aaKnown RBP22.11■■□□□ 1.13
SHANK3-202ENST00000414786 L3MBTL2Q969R5 705 aa22.1■■□□□ 1.13
SHANK3-202ENST00000414786 C1orf115Q9H7X2 142 aa22.1■■□□□ 1.13
SHANK3-202ENST00000414786 SETD5Q9C0A6 1442 aa22.1■■□□□ 1.13
SHANK3-202ENST00000414786 TAF3Q5VWG9 929 aa22.1■■□□□ 1.13
SHANK3-202ENST00000414786 UBTFL1P0CB47 393 aaPredicted RBP22.1■■□□□ 1.13
SHANK3-202ENST00000414786 ERC2O15083 957 aa22.1■■□□□ 1.13
SHANK3-202ENST00000414786 SLC3A2P08195 630 aaKnown RBP22.09■■□□□ 1.13
SHANK3-202ENST00000414786 PUS7Q96PZ0 661 aaKnown RBP22.09■■□□□ 1.13
SHANK3-202ENST00000414786 ABTB2Q8N961 1025 aa22.09■■□□□ 1.13
SHANK3-202ENST00000414786 CARMIL1Q5VZK9 1371 aa22.09■■□□□ 1.13
SHANK3-202ENST00000414786 MYO6Q9UM54 1294 aa22.09■■□□□ 1.13
SHANK3-202ENST00000414786 CCDC181Q5TID7 509 aa22.09■■□□□ 1.13
SHANK3-202ENST00000414786 ANKRD30AQ9BXX3 1397 aa22.08■■□□□ 1.13
SHANK3-202ENST00000414786 NLRP6P59044 892 aa22.08■■□□□ 1.13
SHANK3-202ENST00000414786 WWC3Q9ULE0 1092 aa22.08■■□□□ 1.13
SHANK3-202ENST00000414786 CCER2I3L3R5 266 aa22.08■■□□□ 1.13
SHANK3-202ENST00000414786 TSHZ2Q9NRE2 1034 aa22.08■■□□□ 1.12
SHANK3-202ENST00000414786 ACBD3Q9H3P7 528 aa22.08■■□□□ 1.12
SHANK3-202ENST00000414786 CARMIL2Q6F5E8 1435 aa22.07■■□□□ 1.12
SHANK3-202ENST00000414786 GGNBP2Q9H3C7 697 aa22.07■■□□□ 1.12
SHANK3-202ENST00000414786 CABP2Q9NPB3 220 aa22.07■■□□□ 1.12
SHANK3-202ENST00000414786 XPCQ01831 940 aaPredicted RBP22.07■■□□□ 1.12
SHANK3-202ENST00000414786 PDE4AP27815 886 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms