RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 HRCP23327 699 aa24.68■■□□□ 1.54
CPNE1-208ENST00000414711 BRWD3Q6RI45 1802 aa24.67■■□□□ 1.54
CPNE1-208ENST00000414711 UNC5CLQ8IV45 518 aa24.63■■□□□ 1.53
CPNE1-208ENST00000414711 PXDNQ92626 1479 aa24.63■■□□□ 1.53
CPNE1-208ENST00000414711 SLIT2O94813 1529 aa24.62■■□□□ 1.53
CPNE1-208ENST00000414711 NPHP3Q7Z494 1330 aa24.61■■□□□ 1.53
CPNE1-208ENST00000414711 ZNF326Q5BKZ1 582 aaKnown RBP24.6■■□□□ 1.53
CPNE1-208ENST00000414711 SEPT12Q8IYM1 358 aa24.59■■□□□ 1.53
CPNE1-208ENST00000414711 ROBO2Q9HCK4 1378 aa24.58■■□□□ 1.53
CPNE1-208ENST00000414711 BAG6P46379 1132 aa24.56■■□□□ 1.52
CPNE1-208ENST00000414711 NEXMIFQ5QGS0 1516 aa24.56■■□□□ 1.52
CPNE1-208ENST00000414711 YY1P25490 414 aa24.54■■□□□ 1.52
CPNE1-208ENST00000414711 XPCQ01831 940 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-208ENST00000414711 PRAG1Q86YV5 1406 aa24.53■■□□□ 1.52
CPNE1-208ENST00000414711 ESCO1Q5FWF5 840 aa24.53■■□□□ 1.52
CPNE1-208ENST00000414711 USP32Q8NFA0 1604 aa24.53■■□□□ 1.52
CPNE1-208ENST00000414711 FAM50AQ14320 339 aaKnown RBP24.52■■□□□ 1.52
CPNE1-208ENST00000414711 KRT27Q7Z3Y8 459 aa24.52■■□□□ 1.52
CPNE1-208ENST00000414711 CDC42BPGQ6DT37 1551 aa24.51■■□□□ 1.51
CPNE1-208ENST00000414711 APLP2Q06481 763 aa24.51■■□□□ 1.51
CPNE1-208ENST00000414711 NUP155O75694 1391 aa24.5■■□□□ 1.51
CPNE1-208ENST00000414711 HFM1A2PYH4 1435 aa24.5■■□□□ 1.51
CPNE1-208ENST00000414711 FOXO3O43524 673 aa24.49■■□□□ 1.51
CPNE1-208ENST00000414711 LRPPRCP42704 1394 aaKnown RBP24.48■■□□□ 1.51
CPNE1-208ENST00000414711 R3HDM1Q15032 1099 aaKnown RBP24.48■■□□□ 1.51
CPNE1-208ENST00000414711 VPS72Q15906 364 aa24.48■■□□□ 1.51
CPNE1-208ENST00000414711 ONECUT3O60422 494 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-208ENST00000414711 PLCH1Q4KWH8 1693 aa24.44■■□□□ 1.5
CPNE1-208ENST00000414711 CCDC9Q9Y3X0 531 aaKnown RBP24.44■■□□□ 1.5
CPNE1-208ENST00000414711 EN1Q05925 392 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-208ENST00000414711 RGPD1P0DJD0 1748 aa24.43■■□□□ 1.5
CPNE1-208ENST00000414711 NWD2Q9ULI1 1742 aa24.43■■□□□ 1.5
CPNE1-208ENST00000414711 CLTCL1P53675 1640 aa24.42■■□□□ 1.5
CPNE1-208ENST00000414711 SPATA31A3Q5VYP0 1347 aa24.41■■□□□ 1.5
CPNE1-208ENST00000414711 A0A0G2JS52 829 aa24.41■■□□□ 1.5
CPNE1-208ENST00000414711 MYT1Q01538 1121 aa24.41■■□□□ 1.5
CPNE1-208ENST00000414711 ROCK1Q13464 1354 aa24.4■■□□□ 1.5
CPNE1-208ENST00000414711 DISP2A7MBM2 1401 aa24.38■■□□□ 1.49
CPNE1-208ENST00000414711 HAP1P54257 671 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-208ENST00000414711 CCDC144AA2RUR9 1427 aa24.37■■□□□ 1.49
CPNE1-208ENST00000414711 NAIPQ13075 1403 aa24.36■■□□□ 1.49
CPNE1-208ENST00000414711 KIF1AQ12756 1690 aa24.35■■□□□ 1.49
CPNE1-208ENST00000414711 NUTM2FA1L443 756 aa24.34■■□□□ 1.49
CPNE1-208ENST00000414711 TNS1Q9HBL0 1735 aaKnown RBP24.34■■□□□ 1.49
CPNE1-208ENST00000414711 KIF1BO60333 1816 aa24.33■■□□□ 1.48
CPNE1-208ENST00000414711 VGFO15240 615 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-208ENST00000414711 TNS3Q68CZ2 1445 aa24.32■■□□□ 1.48
CPNE1-208ENST00000414711 ABCA3Q99758 1704 aa24.32■■□□□ 1.48
CPNE1-208ENST00000414711 FAM98CQ17RN3 349 aaKnown RBP24.31■■□□□ 1.48
CPNE1-208ENST00000414711 ADGRB2O60241 1585 aa24.3■■□□□ 1.48
CPNE1-208ENST00000414711 LOC105371045A0A1W2PR82 267 aa24.3■■□□□ 1.48
CPNE1-208ENST00000414711 CABLES1Q8TDN4 633 aa24.3■■□□□ 1.48
CPNE1-208ENST00000414711 NRAPQ86VF7 1730 aa24.29■■□□□ 1.48
CPNE1-208ENST00000414711 EZH2Q15910 746 aaKnown RBP24.28■■□□□ 1.48
CPNE1-208ENST00000414711 PLEKHG5O94827 1062 aa24.27■■□□□ 1.48
CPNE1-208ENST00000414711 FAM182BQ5T319 152 aa24.27■■□□□ 1.48
CPNE1-208ENST00000414711 KRT28Q7Z3Y7 464 aa24.27■■□□□ 1.48
CPNE1-208ENST00000414711 FMN2Q9NZ56 1722 aa24.27■■□□□ 1.48
CPNE1-208ENST00000414711 TECPR2O15040 1411 aa24.22■■□□□ 1.47
CPNE1-208ENST00000414711 FAM83GA6ND36 823 aa24.22■■□□□ 1.47
CPNE1-208ENST00000414711 DCAF8L1A6NGE4 600 aa24.22■■□□□ 1.47
CPNE1-208ENST00000414711 CAMKK2Q96RR4 588 aa24.22■■□□□ 1.47
CPNE1-208ENST00000414711 THSD7AQ9UPZ6 1657 aa24.21■■□□□ 1.47
CPNE1-208ENST00000414711 ARHGEF10O15013 1369 aa24.21■■□□□ 1.47
CPNE1-208ENST00000414711 PARD3Q8TEW0 1356 aa24.21■■□□□ 1.47
CPNE1-208ENST00000414711 NINLQ9Y2I6 1382 aa24.2■■□□□ 1.46
CPNE1-208ENST00000414711 WAPLQ7Z5K2 1190 aa24.2■■□□□ 1.46
CPNE1-208ENST00000414711 PPLO60437 1756 aa24.2■■□□□ 1.46
CPNE1-208ENST00000414711 SBNO1A3KN83 1393 aa24.19■■□□□ 1.46
CPNE1-208ENST00000414711 RPGRIP1LQ68CZ1 1315 aa24.19■■□□□ 1.46
CPNE1-208ENST00000414711 PSME1Q06323 249 aa24.19■■□□□ 1.46
CPNE1-208ENST00000414711 IFFO2Q5TF58 517 aa24.19■■□□□ 1.46
CPNE1-208ENST00000414711 PPP1R1BQ9UD71 204 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-208ENST00000414711 LMOD2Q6P5Q4 547 aa24.18■■□□□ 1.46
CPNE1-208ENST00000414711 BTG4Q9NY30 223 aa24.18■■□□□ 1.46
CPNE1-208ENST00000414711 RREB1Q92766 1687 aa24.18■■□□□ 1.46
CPNE1-208ENST00000414711 PLEKHH1Q9ULM0 1364 aa24.17■■□□□ 1.46
CPNE1-208ENST00000414711 STK26Q9P289 416 aa24.16■■□□□ 1.46
CPNE1-208ENST00000414711 NUP188Q5SRE5 1749 aa24.15■■□□□ 1.46
CPNE1-208ENST00000414711 TRIM37O94972 964 aa24.15■■□□□ 1.46
CPNE1-208ENST00000414711 COL14A1Q05707 1796 aaKnown RBP24.15■■□□□ 1.46
CPNE1-208ENST00000414711 KNDC1Q76NI1 1749 aa24.15■■□□□ 1.46
CPNE1-208ENST00000414711 SPATA31A5Q5VU36 1347 aa24.14■■□□□ 1.46
CPNE1-208ENST00000414711 SPATA31A7Q8IWB4 1347 aa24.14■■□□□ 1.46
CPNE1-208ENST00000414711 SENP3-EIF4A1A0A087X0R7 540 aa24.14■■□□□ 1.45
CPNE1-208ENST00000414711 PHF8Q9UPP1 1060 aa24.14■■□□□ 1.45
CPNE1-208ENST00000414711 NRXN1Q9ULB1 1477 aa24.13■■□□□ 1.45
CPNE1-208ENST00000414711 SPON1Q9HCB6 807 aa24.13■■□□□ 1.45
CPNE1-208ENST00000414711 CAMTA1Q9Y6Y1 1673 aa24.13■■□□□ 1.45
CPNE1-208ENST00000414711 IFT172Q9UG01 1749 aa24.13■■□□□ 1.45
CPNE1-208ENST00000414711 APBA3O96018 575 aa24.12■■□□□ 1.45
CPNE1-208ENST00000414711 ZNF784Q8NCA9 323 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-208ENST00000414711 RGPD8O14715 1765 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-208ENST00000414711 RRBP1Q9P2E9 1410 aaKnown RBP24.1■■□□□ 1.45
CPNE1-208ENST00000414711 ITGAEP38570 1179 aa24.1■■□□□ 1.45
CPNE1-208ENST00000414711 FAM196AQ6ZSG2 479 aa24.1■■□□□ 1.45
CPNE1-208ENST00000414711 ABCC11Q96J66 1382 aa24.1■■□□□ 1.45
CPNE1-208ENST00000414711 NBPF8Q3BBV2 869 aa24.09■■□□□ 1.45
CPNE1-208ENST00000414711 NBPF14Q5TI25 921 aa24.09■■□□□ 1.45
CPNE1-208ENST00000414711 KCNQ2O43526 872 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms