RNA–Protein interactions for RNA: ENST00000414600.1

SOX9-AS1-202, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 742 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-202ENST00000414600 RABGEF1Q9UJ41 708 aa10.29□□□□□ -0.76
SOX9-AS1-202ENST00000414600 ACIN1Q9UKV3 1341 aaKnown RBP10.29□□□□□ -0.76
SOX9-AS1-202ENST00000414600 ANAPC15P60006 121 aa10.28□□□□□ -0.76
SOX9-AS1-202ENST00000414600 SND1Q7KZF4 910 aaKnown RBP eCLIP10.28□□□□□ -0.76
SOX9-AS1-202ENST00000414600 ADAM33Q9BZ11 813 aa10.28□□□□□ -0.76
SOX9-AS1-202ENST00000414600 ANKRD62A6NC57 917 aa10.27□□□□□ -0.77
SOX9-AS1-202ENST00000414600 MARCH6O60337 910 aa10.27□□□□□ -0.77
SOX9-AS1-202ENST00000414600 ZDHHC16Q969W1 377 aa10.27□□□□□ -0.77
SOX9-AS1-202ENST00000414600 PRKD2Q9BZL6 878 aa10.27□□□□□ -0.77
SOX9-AS1-202ENST00000414600 CUX2O14529 1486 aa10.26□□□□□ -0.77
SOX9-AS1-202ENST00000414600 SREK1Q8WXA9 508 aaKnown RBP10.26□□□□□ -0.77
SOX9-AS1-202ENST00000414600 JPH4Q96JJ6 628 aa10.26□□□□□ -0.77
SOX9-AS1-202ENST00000414600 MYH16Q9H6N6 1097 aa10.26□□□□□ -0.77
SOX9-AS1-202ENST00000414600 KIF21AQ7Z4S6 1674 aa10.25□□□□□ -0.77
SOX9-AS1-202ENST00000414600 HIRIP3Q9BW71 556 aaPredicted RBP10.25□□□□□ -0.77
SOX9-AS1-202ENST00000414600 LAMC3Q9Y6N6 1575 aa10.24□□□□□ -0.77
SOX9-AS1-202ENST00000414600 E2F4Q16254 413 aa10.24□□□□□ -0.77
SOX9-AS1-202ENST00000414600 KIAA1522Q9P206 1035 aaPredicted RBP10.24□□□□□ -0.77
SOX9-AS1-202ENST00000414600 AAMPQ13685 434 aa10.23□□□□□ -0.77
SOX9-AS1-202ENST00000414600 TSR1Q2NL82 804 aaKnown RBP10.23□□□□□ -0.77
SOX9-AS1-202ENST00000414600 PROX2Q3B8N5 592 aa10.23□□□□□ -0.77
SOX9-AS1-202ENST00000414600 LAPTM4BQ86VI4 370 aa10.23□□□□□ -0.77
SOX9-AS1-202ENST00000414600 C8orf37Q96NL8 207 aa10.23□□□□□ -0.77
SOX9-AS1-202ENST00000414600 PRDM10Q9NQV6 1147 aa10.23□□□□□ -0.77
SOX9-AS1-202ENST00000414600 ZFRQ96KR1 1074 aaKnown RBP10.22□□□□□ -0.77
SOX9-AS1-202ENST00000414600 PPME1Q9Y570 386 aa10.22□□□□□ -0.77
SOX9-AS1-202ENST00000414600 SIRT1Q96EB6 747 aa10.21□□□□□ -0.77
SOX9-AS1-202ENST00000414600 ANO8Q9HCE9 1232 aaPredicted RBP10.21□□□□□ -0.77
SOX9-AS1-202ENST00000414600 PDS5BQ9NTI5 1447 aa10.21□□□□□ -0.78
SOX9-AS1-202ENST00000414600 THOC2Q8NI27 1593 aaKnown RBP10.21□□□□□ -0.78
SOX9-AS1-202ENST00000414600 PPP1R3GB7ZBB8 358 aa10.2□□□□□ -0.78
SOX9-AS1-202ENST00000414600 TPD52L2O43399 206 aaKnown RBP10.2□□□□□ -0.78
SOX9-AS1-202ENST00000414600 POM121Q96HA1 1249 aa10.2□□□□□ -0.78
SOX9-AS1-202ENST00000414600 IVNS1ABPQ9Y6Y0 642 aa10.19□□□□□ -0.78
SOX9-AS1-202ENST00000414600 CENPBP07199 599 aaPredicted RBP10.18□□□□□ -0.78
SOX9-AS1-202ENST00000414600 GORABQ5T7V8 394 aa10.18□□□□□ -0.78
SOX9-AS1-202ENST00000414600 GPIHBP1Q8IV16 184 aa10.18□□□□□ -0.78
SOX9-AS1-202ENST00000414600 MRRFQ96E11 262 aaKnown RBP10.18□□□□□ -0.78
SOX9-AS1-202ENST00000414600 USTQ9Y2C2 406 aa10.18□□□□□ -0.78
SOX9-AS1-202ENST00000414600 SUGT1Q9Y2Z0 365 aa10.18□□□□□ -0.78
SOX9-AS1-202ENST00000414600 V9GY48 417 aaPredicted RBP10.18□□□□□ -0.78
SOX9-AS1-202ENST00000414600 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
SOX9-AS1-202ENST00000414600 TCF3P15923 654 aa10.17□□□□□ -0.78
SOX9-AS1-202ENST00000414600 GPATCH11Q8N954 259 aa10.17□□□□□ -0.78
SOX9-AS1-202ENST00000414600 DNAJC2Q99543 621 aaKnown RBP10.17□□□□□ -0.78
SOX9-AS1-202ENST00000414600 PDZRN3Q9UPQ7 1066 aa10.17□□□□□ -0.78
SOX9-AS1-202ENST00000414600 EVI5O60447 810 aa10.15□□□□□ -0.78
SOX9-AS1-202ENST00000414600 COL9A1P20849 921 aa10.15□□□□□ -0.78
SOX9-AS1-202ENST00000414600 GRIPAP1Q4V328 841 aa10.15□□□□□ -0.78
SOX9-AS1-202ENST00000414600 UBXN4Q92575 508 aa10.15□□□□□ -0.78
SOX9-AS1-202ENST00000414600 KIAA1468Q9P260 1216 aa10.15□□□□□ -0.78
SOX9-AS1-202ENST00000414600 RBM27Q9P2N5 1060 aaKnown RBP10.15□□□□□ -0.78
SOX9-AS1-202ENST00000414600 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.78
SOX9-AS1-202ENST00000414600 SPTY2D1Q68D10 685 aaPredicted RBP10.14□□□□□ -0.79
SOX9-AS1-202ENST00000414600 CCDC88BA6NC98 1476 aa10.14□□□□□ -0.79
SOX9-AS1-202ENST00000414600 FANCD2Q9BXW9 1451 aa10.14□□□□□ -0.79
SOX9-AS1-202ENST00000414600 CFTRP13569 1480 aa10.13□□□□□ -0.79
SOX9-AS1-202ENST00000414600 MCCP23508 829 aa10.13□□□□□ -0.79
SOX9-AS1-202ENST00000414600 CNPY4Q8N129 248 aa10.13□□□□□ -0.79
SOX9-AS1-202ENST00000414600 MICAL1Q8TDZ2 1067 aa10.13□□□□□ -0.79
SOX9-AS1-202ENST00000414600 PCMTD1Q96MG8 357 aaPredicted RBP10.13□□□□□ -0.79
SOX9-AS1-202ENST00000414600 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
SOX9-AS1-202ENST00000414600 MRC2Q9UBG0 1479 aa10.12□□□□□ -0.79
SOX9-AS1-202ENST00000414600 MCCD1P59942 119 aaPredicted RBP10.11□□□□□ -0.79
SOX9-AS1-202ENST00000414600 RBM26Q5T8P6 1007 aaKnown RBP10.11□□□□□ -0.79
SOX9-AS1-202ENST00000414600 TXNDC2Q86VQ3 553 aa10.11□□□□□ -0.79
SOX9-AS1-202ENST00000414600 SLC52A1Q9NWF4 448 aa10.11□□□□□ -0.79
SOX9-AS1-202ENST00000414600 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.11□□□□□ -0.79
SOX9-AS1-202ENST00000414600 SEPT9Q9UHD8 586 aaPredicted RBP10.11□□□□□ -0.79
SOX9-AS1-202ENST00000414600 CEP164Q9UPV0 1460 aa10.1□□□□□ -0.79
SOX9-AS1-202ENST00000414600 LAS1LQ9Y4W2 734 aaKnown RBP10.1□□□□□ -0.79
SOX9-AS1-202ENST00000414600 PPP1R15BQ5SWA1 713 aa10.09□□□□□ -0.79
SOX9-AS1-202ENST00000414600 PPP1R18Q6NYC8 613 aa10.09□□□□□ -0.79
SOX9-AS1-202ENST00000414600 TMTC2Q8N394 836 aa10.09□□□□□ -0.79
SOX9-AS1-202ENST00000414600 LRCH3Q96II8 777 aa10.09□□□□□ -0.79
SOX9-AS1-202ENST00000414600 WDR62O43379 1518 aa10.08□□□□□ -0.8
SOX9-AS1-202ENST00000414600 ZNF330Q9Y3S2 320 aaPredicted RBP10.08□□□□□ -0.8
SOX9-AS1-202ENST00000414600 TJAP1Q5JTD0 557 aa10.07□□□□□ -0.8
SOX9-AS1-202ENST00000414600 GIMAP6Q6P9H5 292 aa10.07□□□□□ -0.8
SOX9-AS1-202ENST00000414600 URB2Q14146 1524 aaKnown RBP10.07□□□□□ -0.8
SOX9-AS1-202ENST00000414600 FAM50AQ14320 339 aaKnown RBP10.06□□□□□ -0.8
SOX9-AS1-202ENST00000414600 FAM98CQ17RN3 349 aaKnown RBP10.06□□□□□ -0.8
SOX9-AS1-202ENST00000414600 ZNF662Q6ZS27 426 aa10.06□□□□□ -0.8
SOX9-AS1-202ENST00000414600 SGSM3Q96HU1 749 aa10.06□□□□□ -0.8
SOX9-AS1-202ENST00000414600 COG6Q9Y2V7 657 aa10.06□□□□□ -0.8
SOX9-AS1-202ENST00000414600 PCDHGA10Q9Y5H3 936 aa10.06□□□□□ -0.8
SOX9-AS1-202ENST00000414600 HMGB1P1B2RPK0 211 aaPredicted RBP10.05□□□□□ -0.8
SOX9-AS1-202ENST00000414600 RAB11FIP3O75154 756 aa10.05□□□□□ -0.8
SOX9-AS1-202ENST00000414600 ZC3H6P61129 1189 aaKnown RBP10.05□□□□□ -0.8
SOX9-AS1-202ENST00000414600 SKIV2LQ15477 1246 aaKnown RBP10.05□□□□□ -0.8
SOX9-AS1-202ENST00000414600 CSB-PGBD3P0DP91 1061 aa10.04□□□□□ -0.8
SOX9-AS1-202ENST00000414600 RALBP1Q15311 655 aa10.04□□□□□ -0.8
SOX9-AS1-202ENST00000414600 SF3A1Q15459 793 aaKnown RBP10.04□□□□□ -0.8
SOX9-AS1-202ENST00000414600 CCDC181Q5TID7 509 aa10.04□□□□□ -0.8
SOX9-AS1-202ENST00000414600 PARP9Q8IXQ6 854 aa10.04□□□□□ -0.8
SOX9-AS1-202ENST00000414600 MORC4Q8TE76 937 aa10.04□□□□□ -0.8
SOX9-AS1-202ENST00000414600 PBXIP1Q96AQ6 731 aa10.04□□□□□ -0.8
SOX9-AS1-202ENST00000414600 CRISPLD2Q9H0B8 497 aa10.04□□□□□ -0.8
SOX9-AS1-202ENST00000414600 TERF2IPQ9NYB0 399 aa10.04□□□□□ -0.8
SOX9-AS1-202ENST00000414600 AMHR2Q16671 573 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms