RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 SLC19A1P41440 591 aa12.6□□□□□ -0.39
ATG4C-204ENST00000414558 RETREG3Q86VR2 466 aa12.6□□□□□ -0.39
ATG4C-204ENST00000414558 IRX2Q9BZI1 471 aaPredicted RBP12.6□□□□□ -0.39
ATG4C-204ENST00000414558 PCDHGC3Q9UN70 934 aa12.6□□□□□ -0.39
ATG4C-204ENST00000414558 C6orf229H3BNL8 230 aa12.59□□□□□ -0.39
ATG4C-204ENST00000414558 MMP16P51512 607 aa12.59□□□□□ -0.39
ATG4C-204ENST00000414558 TPRNQ4KMQ1 711 aa12.59□□□□□ -0.39
ATG4C-204ENST00000414558 RSBN1LQ6PCB5 846 aaPredicted RBP12.59□□□□□ -0.39
ATG4C-204ENST00000414558 FCF1Q9Y324 198 aaKnown RBP12.59□□□□□ -0.39
ATG4C-204ENST00000414558 SYMPKQ92797 1274 aaKnown RBP12.58□□□□□ -0.4
ATG4C-204ENST00000414558 KDM4CQ9H3R0 1056 aa12.58□□□□□ -0.4
ATG4C-204ENST00000414558 GPBP1L1Q9HC44 474 aaPredicted RBP12.57□□□□□ -0.4
ATG4C-204ENST00000414558 SPTLC1O15269 473 aa12.56□□□□□ -0.4
ATG4C-204ENST00000414558 DXOO77932 396 aaKnown RBP12.56□□□□□ -0.4
ATG4C-204ENST00000414558 SPDYE5A6NIY4 337 aa12.55□□□□□ -0.4
ATG4C-204ENST00000414558 MTMR2Q13614 643 aa12.55□□□□□ -0.4
ATG4C-204ENST00000414558 PLA2G2CQ5R387 149 aa12.55□□□□□ -0.4
ATG4C-204ENST00000414558 RIC3Q7Z5B4 369 aa12.55□□□□□ -0.4
ATG4C-204ENST00000414558 EMID1Q96A84 441 aaPredicted RBP12.55□□□□□ -0.4
ATG4C-204ENST00000414558 MYSM1Q5VVJ2 828 aa12.54□□□□□ -0.4
ATG4C-204ENST00000414558 LIAT1Q6ZQX7 453 aa12.54□□□□□ -0.4
ATG4C-204ENST00000414558 DDRGK1Q96HY6 314 aa12.54□□□□□ -0.4
ATG4C-204ENST00000414558 RSPH6AQ9H0K4 717 aa12.54□□□□□ -0.4
ATG4C-204ENST00000414558 JUNDP17535 347 aa12.53□□□□□ -0.4
ATG4C-204ENST00000414558 SPRYD7Q5W111 196 aa12.53□□□□□ -0.4
ATG4C-204ENST00000414558 RPIAP49247 311 aa12.52□□□□□ -0.41
ATG4C-204ENST00000414558 ZBTB3Q9H5J0 574 aa12.51□□□□□ -0.41
ATG4C-204ENST00000414558 PCDHB15Q9Y5E8 787 aa12.51□□□□□ -0.41
ATG4C-204ENST00000414558 LAPTM4AQ15012 233 aa12.5□□□□□ -0.41
ATG4C-204ENST00000414558 TUSC1Q2TAM9 212 aa12.5□□□□□ -0.41
ATG4C-204ENST00000414558 PRPF38BQ5VTL8 546 aaKnown RBP12.5□□□□□ -0.41
ATG4C-204ENST00000414558 ZNF598Q86UK7 904 aaKnown RBP12.5□□□□□ -0.41
ATG4C-204ENST00000414558 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
ATG4C-204ENST00000414558 PRR7Q8TB68 274 aa12.49□□□□□ -0.41
ATG4C-204ENST00000414558 FAM117AQ9C073 453 aa12.49□□□□□ -0.41
ATG4C-204ENST00000414558 CLK2P49760 499 aaKnown RBP12.48□□□□□ -0.41
ATG4C-204ENST00000414558 ZNF697Q5TEC3 545 aa12.48□□□□□ -0.41
ATG4C-204ENST00000414558 LIMD1Q9UGP4 676 aa12.48□□□□□ -0.41
ATG4C-204ENST00000414558 CD2BP2O95400 341 aaKnown RBP12.47□□□□□ -0.41
ATG4C-204ENST00000414558 NEUROD2Q15784 382 aa12.47□□□□□ -0.41
ATG4C-204ENST00000414558 CSPP1Q1MSJ5 1256 aa12.47□□□□□ -0.41
ATG4C-204ENST00000414558 GFRA3O60609 400 aa12.46□□□□□ -0.41
ATG4C-204ENST00000414558 HRCP23327 699 aa12.46□□□□□ -0.41
ATG4C-204ENST00000414558 DESI1Q6ICB0 168 aa12.46□□□□□ -0.41
ATG4C-204ENST00000414558 CCDC24Q8N4L8 307 aa12.46□□□□□ -0.41
ATG4C-204ENST00000414558 NUDT12Q9BQG2 462 aa12.45□□□□□ -0.42
ATG4C-204ENST00000414558 SH3D19Q5HYK7 790 aa12.44□□□□□ -0.42
ATG4C-204ENST00000414558 POLR3EQ9NVU0 708 aa12.44□□□□□ -0.42
ATG4C-204ENST00000414558 PDZRN3Q9UPQ7 1066 aa12.44□□□□□ -0.42
ATG4C-204ENST00000414558 PTPRNQ16849 979 aa12.43□□□□□ -0.42
ATG4C-204ENST00000414558 CABLES1Q8TDN4 633 aa12.43□□□□□ -0.42
ATG4C-204ENST00000414558 PLEKHG3A1L390 1219 aa12.42□□□□□ -0.42
ATG4C-204ENST00000414558 NUTM2BA6NNL0 878 aaPredicted RBP12.42□□□□□ -0.42
ATG4C-204ENST00000414558 NUTM2EB1AL46 878 aaPredicted RBP12.42□□□□□ -0.42
ATG4C-204ENST00000414558 NRG2O14511 850 aaPredicted RBP12.42□□□□□ -0.42
ATG4C-204ENST00000414558 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
ATG4C-204ENST00000414558 NUTM2AQ8IVF1 878 aaPredicted RBP12.42□□□□□ -0.42
ATG4C-204ENST00000414558 CFAP99D6REC4 459 aa12.41□□□□□ -0.42
ATG4C-204ENST00000414558 LILRB3O75022 631 aa12.41□□□□□ -0.42
ATG4C-204ENST00000414558 CCNYL3P0C7X3 344 aa12.41□□□□□ -0.42
ATG4C-204ENST00000414558 TRIM32Q13049 653 aa12.41□□□□□ -0.42
ATG4C-204ENST00000414558 SKIV2LQ15477 1246 aaKnown RBP12.41□□□□□ -0.42
ATG4C-204ENST00000414558 QPCTQ16769 361 aa12.41□□□□□ -0.42
ATG4C-204ENST00000414558 BRPF1P55201 1214 aaPredicted RBP12.4□□□□□ -0.42
ATG4C-204ENST00000414558 PRR20EP86478 221 aa12.4□□□□□ -0.42
ATG4C-204ENST00000414558 PRR20CP86479 221 aa12.4□□□□□ -0.42
ATG4C-204ENST00000414558 PRR20DP86480 221 aa12.4□□□□□ -0.42
ATG4C-204ENST00000414558 PRR20BP86481 221 aa12.4□□□□□ -0.42
ATG4C-204ENST00000414558 PRR20AP86496 221 aa12.4□□□□□ -0.42
ATG4C-204ENST00000414558 TRIM67Q6ZTA4 783 aa12.39□□□□□ -0.43
ATG4C-204ENST00000414558 GDF9O60383 454 aa12.37□□□□□ -0.43
ATG4C-204ENST00000414558 LYPD8Q6UX82 237 aa12.37□□□□□ -0.43
ATG4C-204ENST00000414558 EVA1BQ9NVM1 165 aa12.37□□□□□ -0.43
ATG4C-204ENST00000414558 Q6ZNB5 142 aa12.36□□□□□ -0.43
ATG4C-204ENST00000414558 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
ATG4C-204ENST00000414558 TNFRSF10AO00220 468 aa12.35□□□□□ -0.43
ATG4C-204ENST00000414558 FOXC1Q12948 553 aa12.35□□□□□ -0.43
ATG4C-204ENST00000414558 HELBQ8NG08 1087 aaPredicted RBP12.35□□□□□ -0.43
ATG4C-204ENST00000414558 KCNH2Q12809 1159 aa12.34□□□□□ -0.43
ATG4C-204ENST00000414558 RTL5Q5HYW3 569 aaPredicted RBP12.34□□□□□ -0.43
ATG4C-204ENST00000414558 TSC1Q92574 1164 aa12.34□□□□□ -0.43
ATG4C-204ENST00000414558 PKD2L1Q9P0L9 805 aa12.34□□□□□ -0.43
ATG4C-204ENST00000414558 PTCRAQ6ISU1 281 aaPredicted RBP12.33□□□□□ -0.44
ATG4C-204ENST00000414558 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.33□□□□□ -0.44
ATG4C-204ENST00000414558 GOPCQ9HD26 462 aa12.33□□□□□ -0.44
ATG4C-204ENST00000414558 WNT7BP56706 349 aa12.32□□□□□ -0.44
ATG4C-204ENST00000414558 IL27Q8NEV9 243 aa12.32□□□□□ -0.44
ATG4C-204ENST00000414558 UNC93B1Q9H1C4 597 aa12.32□□□□□ -0.44
ATG4C-204ENST00000414558 WNT7AO00755 349 aa12.31□□□□□ -0.44
ATG4C-204ENST00000414558 PROCA1Q8NCQ7 364 aaPredicted RBP12.31□□□□□ -0.44
ATG4C-204ENST00000414558 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
ATG4C-204ENST00000414558 CTHP32929 405 aa12.3□□□□□ -0.44
ATG4C-204ENST00000414558 PPP2R2DQ66LE6 453 aa12.28□□□□□ -0.44
ATG4C-204ENST00000414558 PCMTD1Q96MG8 357 aaPredicted RBP12.28□□□□□ -0.44
ATG4C-204ENST00000414558 PER1O15534 1290 aaPredicted RBP12.27□□□□□ -0.45
ATG4C-204ENST00000414558 F12P00748 615 aaPredicted RBP12.27□□□□□ -0.45
ATG4C-204ENST00000414558 SKOR1P84550 965 aa12.27□□□□□ -0.45
ATG4C-204ENST00000414558 CYP4X1Q8N118 509 aa12.27□□□□□ -0.45
ATG4C-204ENST00000414558 PKDCCQ504Y2 493 aa12.26□□□□□ -0.45
ATG4C-204ENST00000414558 DGAT1O75907 488 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms