RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 AKNAQ7Z591 1439 aa10.59□□□□□ -0.71
LINC00343-201ENST00000414368 FOXK1P85037 733 aa10.59□□□□□ -0.71
LINC00343-201ENST00000414368 CAMK2BQ13554 666 aa10.59□□□□□ -0.71
LINC00343-201ENST00000414368 ZBED2Q9BTP6 218 aa10.59□□□□□ -0.71
LINC00343-201ENST00000414368 CFDP1Q9UEE9 299 aaPredicted RBP10.59□□□□□ -0.71
LINC00343-201ENST00000414368 NEO1Q92859 1461 aa10.59□□□□□ -0.71
LINC00343-201ENST00000414368 ZNF644Q9H582 1327 aaPredicted RBP10.58□□□□□ -0.71
LINC00343-201ENST00000414368 ARAP3Q8WWN8 1544 aa10.58□□□□□ -0.72
LINC00343-201ENST00000414368 RAPGEF3O95398 923 aa10.58□□□□□ -0.72
LINC00343-201ENST00000414368 CFAP74Q9C0B2 1584 aa10.57□□□□□ -0.72
LINC00343-201ENST00000414368 PLPP6Q8IY26 295 aa10.57□□□□□ -0.72
LINC00343-201ENST00000414368 ZNF454Q8N9F8 522 aa10.57□□□□□ -0.72
LINC00343-201ENST00000414368 ITSN2Q9NZM3 1697 aa10.57□□□□□ -0.72
LINC00343-201ENST00000414368 ADGRL1O94910 1474 aa10.56□□□□□ -0.72
LINC00343-201ENST00000414368 PHLDB1Q86UU1 1377 aa10.56□□□□□ -0.72
LINC00343-201ENST00000414368 PTPREP23469 700 aa10.56□□□□□ -0.72
LINC00343-201ENST00000414368 SCAPERQ9BY12 1400 aa10.56□□□□□ -0.72
LINC00343-201ENST00000414368 SAMD9LQ8IVG5 1584 aa10.56□□□□□ -0.72
LINC00343-201ENST00000414368 ARHGEF12Q9NZN5 1544 aa10.55□□□□□ -0.72
LINC00343-201ENST00000414368 HNRNPMP52272 730 aaKnown RBP eCLIP10.55□□□□□ -0.72
LINC00343-201ENST00000414368 ANKK1Q8NFD2 765 aa10.55□□□□□ -0.72
LINC00343-201ENST00000414368 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
LINC00343-201ENST00000414368 MYOM3Q5VTT5 1437 aa10.54□□□□□ -0.72
LINC00343-201ENST00000414368 RICTORQ6R327 1708 aa10.54□□□□□ -0.72
LINC00343-201ENST00000414368 AFAP1Q8N556 730 aa10.54□□□□□ -0.72
LINC00343-201ENST00000414368 DENND4BO75064 1496 aaPredicted RBP10.54□□□□□ -0.72
LINC00343-201ENST00000414368 FRMPD1Q5SYB0 1578 aa10.53□□□□□ -0.72
LINC00343-201ENST00000414368 SEMA3EO15041 775 aa10.53□□□□□ -0.72
LINC00343-201ENST00000414368 ABCC1P33527 1531 aa10.53□□□□□ -0.72
LINC00343-201ENST00000414368 TRAPPC8Q9Y2L5 1435 aa10.52□□□□□ -0.73
LINC00343-201ENST00000414368 NYAP1Q6ZVC0 841 aa10.52□□□□□ -0.73
LINC00343-201ENST00000414368 SYCP2Q9BX26 1530 aa10.52□□□□□ -0.73
LINC00343-201ENST00000414368 CAMSAP2Q08AD1 1489 aa10.51□□□□□ -0.73
LINC00343-201ENST00000414368 SMYD5Q6GMV2 418 aa10.51□□□□□ -0.73
LINC00343-201ENST00000414368 FGD6Q6ZV73 1430 aa10.5□□□□□ -0.73
LINC00343-201ENST00000414368 POGZQ7Z3K3 1410 aa10.5□□□□□ -0.73
LINC00343-201ENST00000414368 TESPA1A2RU30 521 aaPredicted RBP10.5□□□□□ -0.73
LINC00343-201ENST00000414368 DPYSL4O14531 572 aa10.5□□□□□ -0.73
LINC00343-201ENST00000414368 LMOD2Q6P5Q4 547 aa10.5□□□□□ -0.73
LINC00343-201ENST00000414368 EMILIN3Q9NT22 766 aa10.5□□□□□ -0.73
LINC00343-201ENST00000414368 PTPN23Q9H3S7 1636 aa10.5□□□□□ -0.73
LINC00343-201ENST00000414368 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
LINC00343-201ENST00000414368 KIAA1107Q9UPP5 1409 aa10.5□□□□□ -0.73
LINC00343-201ENST00000414368 BCAMP50895 628 aa10.49□□□□□ -0.73
LINC00343-201ENST00000414368 PLEKHH2Q8IVE3 1493 aa10.49□□□□□ -0.73
LINC00343-201ENST00000414368 MBD5Q9P267 1494 aa10.49□□□□□ -0.73
LINC00343-201ENST00000414368 FAM50AQ14320 339 aaKnown RBP10.48□□□□□ -0.73
LINC00343-201ENST00000414368 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC00343-201ENST00000414368 PRKD2Q9BZL6 878 aa10.48□□□□□ -0.73
LINC00343-201ENST00000414368 ZNF518AQ6AHZ1 1483 aa10.48□□□□□ -0.73
LINC00343-201ENST00000414368 SPDYE16A6NNV3 312 aaPredicted RBP10.47□□□□□ -0.73
LINC00343-201ENST00000414368 MAP3K9P80192 1104 aa10.47□□□□□ -0.73
LINC00343-201ENST00000414368 YEATS2Q9ULM3 1422 aa10.47□□□□□ -0.73
LINC00343-201ENST00000414368 KDM5CP41229 1560 aa10.47□□□□□ -0.73
LINC00343-201ENST00000414368 UPF1Q92900 1129 aaKnown RBP eCLIP10.46□□□□□ -0.73
LINC00343-201ENST00000414368 ZMYM4Q5VZL5 1548 aa10.46□□□□□ -0.74
LINC00343-201ENST00000414368 KIDINS220Q9ULH0 1771 aa10.45□□□□□ -0.74
LINC00343-201ENST00000414368 TCOF1Q13428 1488 aaKnown RBP10.45□□□□□ -0.74
LINC00343-201ENST00000414368 SPAG9O60271 1321 aaKnown RBP10.45□□□□□ -0.74
LINC00343-201ENST00000414368 ARHGEF5Q12774 1597 aa10.44□□□□□ -0.74
LINC00343-201ENST00000414368 HECW2Q9P2P5 1572 aa10.44□□□□□ -0.74
LINC00343-201ENST00000414368 ZFYVE16Q7Z3T8 1539 aa10.44□□□□□ -0.74
LINC00343-201ENST00000414368 SOWAHBA6NEL2 793 aa10.44□□□□□ -0.74
LINC00343-201ENST00000414368 FOSBP53539 338 aa10.44□□□□□ -0.74
LINC00343-201ENST00000414368 PDIA6Q15084 440 aa10.44□□□□□ -0.74
LINC00343-201ENST00000414368 CCDC141Q6ZP82 1450 aa10.43□□□□□ -0.74
LINC00343-201ENST00000414368 MLH3Q9UHC1 1453 aa10.43□□□□□ -0.74
LINC00343-201ENST00000414368 ABCC5O15440 1437 aa10.43□□□□□ -0.74
LINC00343-201ENST00000414368 RSPH4AQ5TD94 716 aa10.43□□□□□ -0.74
LINC00343-201ENST00000414368 WBP1LQ9NX94 342 aa10.43□□□□□ -0.74
LINC00343-201ENST00000414368 ARHGEF40Q8TER5 1519 aa10.43□□□□□ -0.74
LINC00343-201ENST00000414368 MAGI2Q86UL8 1455 aa10.42□□□□□ -0.74
LINC00343-201ENST00000414368 SIGLEC1Q9BZZ2 1709 aa10.42□□□□□ -0.74
LINC00343-201ENST00000414368 TSPY4P0CV99 314 aa10.42□□□□□ -0.74
LINC00343-201ENST00000414368 TSPY10P0CW01 314 aa10.42□□□□□ -0.74
LINC00343-201ENST00000414368 ITGAEP38570 1179 aa10.42□□□□□ -0.74
LINC00343-201ENST00000414368 CHIC2Q9UKJ5 165 aa10.42□□□□□ -0.74
LINC00343-201ENST00000414368 ABCA6Q8N139 1617 aa10.42□□□□□ -0.74
LINC00343-201ENST00000414368 INO80Q9ULG1 1556 aaPredicted RBP10.42□□□□□ -0.74
LINC00343-201ENST00000414368 ATP7AQ04656 1500 aa10.42□□□□□ -0.74
LINC00343-201ENST00000414368 DAPK1P53355 1430 aa10.41□□□□□ -0.74
LINC00343-201ENST00000414368 DNMT1P26358 1616 aaKnown RBP10.41□□□□□ -0.74
LINC00343-201ENST00000414368 DIP2CQ9Y2E4 1556 aa10.41□□□□□ -0.74
LINC00343-201ENST00000414368 ATP10AO60312 1499 aa10.41□□□□□ -0.74
LINC00343-201ENST00000414368 RRBP1Q9P2E9 1410 aaKnown RBP10.41□□□□□ -0.74
LINC00343-201ENST00000414368 CROCC2H7BZ55 1655 aa10.41□□□□□ -0.74
LINC00343-201ENST00000414368 OXER1Q8TDS5 423 aa10.4□□□□□ -0.74
LINC00343-201ENST00000414368 RABGEF1Q9UJ41 708 aa10.4□□□□□ -0.74
LINC00343-201ENST00000414368 PTPRKQ15262 1439 aa10.4□□□□□ -0.75
LINC00343-201ENST00000414368 ARID4BQ4LE39 1312 aaPredicted RBP10.39□□□□□ -0.75
LINC00343-201ENST00000414368 MLLT3P42568 568 aaPredicted RBP10.39□□□□□ -0.75
LINC00343-201ENST00000414368 PDZRN3Q9UPQ7 1066 aa10.39□□□□□ -0.75
LINC00343-201ENST00000414368 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
LINC00343-201ENST00000414368 C9orf84Q5VXU9 1444 aa10.39□□□□□ -0.75
LINC00343-201ENST00000414368 ADGBQ8N7X0 1667 aa10.38□□□□□ -0.75
LINC00343-201ENST00000414368 V9GY48 417 aaPredicted RBP10.38□□□□□ -0.75
LINC00343-201ENST00000414368 MAST1Q9Y2H9 1570 aa10.38□□□□□ -0.75
LINC00343-201ENST00000414368 MLECQ14165 292 aa10.37□□□□□ -0.75
LINC00343-201ENST00000414368 RRP7BPQ9NSQ0 103 aa10.37□□□□□ -0.75
LINC00343-201ENST00000414368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms