RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 KIF6Q6ZMV9 814 aa12.86□□□□□ -0.35
SCN5A-204ENST00000414099 NFXL1Q6ZNB6 911 aa12.86□□□□□ -0.35
SCN5A-204ENST00000414099 HOMER1Q86YM7 354 aa12.85□□□□□ -0.35
SCN5A-204ENST00000414099 CLUAP1Q96AJ1 413 aa12.85□□□□□ -0.35
SCN5A-204ENST00000414099 NOL8Q76FK4 1167 aaKnown RBP12.85□□□□□ -0.35
SCN5A-204ENST00000414099 EIF2S2P20042 333 aaKnown RBP12.85□□□□□ -0.35
SCN5A-204ENST00000414099 HSP90B2PQ58FF3 399 aa12.85□□□□□ -0.35
SCN5A-204ENST00000414099 SASS6Q6UVJ0 657 aa12.85□□□□□ -0.35
SCN5A-204ENST00000414099 PATL2C9JE40 543 aaKnown RBP12.84□□□□□ -0.35
SCN5A-204ENST00000414099 FGD5Q6ZNL6 1462 aa12.84□□□□□ -0.35
SCN5A-204ENST00000414099 POGZQ7Z3K3 1410 aa12.84□□□□□ -0.35
SCN5A-204ENST00000414099 EPS15P42566 896 aa12.84□□□□□ -0.35
SCN5A-204ENST00000414099 GNAI1P63096 354 aa12.84□□□□□ -0.35
SCN5A-204ENST00000414099 LETM1O95202 739 aaPredicted RBP12.84□□□□□ -0.35
SCN5A-204ENST00000414099 CCAR1Q8IX12 1150 aaKnown RBP12.84□□□□□ -0.35
SCN5A-204ENST00000414099 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
SCN5A-204ENST00000414099 RALYLQ86SE5 291 aaKnown RBP12.83□□□□□ -0.36
SCN5A-204ENST00000414099 OLFM4Q6UX06 510 aa12.83□□□□□ -0.36
SCN5A-204ENST00000414099 RIC3Q7Z5B4 369 aa12.83□□□□□ -0.36
SCN5A-204ENST00000414099 NUCB2P80303 420 aa12.82□□□□□ -0.36
SCN5A-204ENST00000414099 KIF7Q2M1P5 1343 aa12.82□□□□□ -0.36
SCN5A-204ENST00000414099 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
SCN5A-204ENST00000414099 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
SCN5A-204ENST00000414099 ANO2Q9NQ90 1003 aa12.82□□□□□ -0.36
SCN5A-204ENST00000414099 RUNDC1Q96C34 613 aa12.81□□□□□ -0.36
SCN5A-204ENST00000414099 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
SCN5A-204ENST00000414099 FKBP5Q13451 457 aaPredicted RBP12.81□□□□□ -0.36
SCN5A-204ENST00000414099 MNS1Q8NEH6 495 aa12.81□□□□□ -0.36
SCN5A-204ENST00000414099 ZNF592Q92610 1267 aa12.81□□□□□ -0.36
SCN5A-204ENST00000414099 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
SCN5A-204ENST00000414099 GSE1Q14687 1217 aa12.81□□□□□ -0.36
SCN5A-204ENST00000414099 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
SCN5A-204ENST00000414099 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
SCN5A-204ENST00000414099 TSPYL4Q9UJ04 414 aa12.81□□□□□ -0.36
SCN5A-204ENST00000414099 TXLNBQ8N3L3 684 aa12.81□□□□□ -0.36
SCN5A-204ENST00000414099 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
SCN5A-204ENST00000414099 TBC1D2BQ9UPU7 963 aa12.81□□□□□ -0.36
SCN5A-204ENST00000414099 MAP7D2Q96T17 732 aa12.8□□□□□ -0.36
SCN5A-204ENST00000414099 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
SCN5A-204ENST00000414099 BICD2Q8TD16 824 aa12.8□□□□□ -0.36
SCN5A-204ENST00000414099 HIP1O00291 1037 aa12.8□□□□□ -0.36
SCN5A-204ENST00000414099 RIPK4P57078 832 aa12.8□□□□□ -0.36
SCN5A-204ENST00000414099 INTS3Q68E01 1043 aaKnown RBP12.8□□□□□ -0.36
SCN5A-204ENST00000414099 NAP1L1P55209 391 aaKnown RBP12.8□□□□□ -0.36
SCN5A-204ENST00000414099 CCDC73Q6ZRK6 1079 aa12.8□□□□□ -0.36
SCN5A-204ENST00000414099 GNL3LQ9NVN8 582 aaKnown RBP12.8□□□□□ -0.36
SCN5A-204ENST00000414099 GAS2L2Q8NHY3 880 aa12.79□□□□□ -0.36
SCN5A-204ENST00000414099 PSMA5P28066 241 aa12.79□□□□□ -0.36
SCN5A-204ENST00000414099 PIP4K2AP48426 406 aaPredicted RBP12.79□□□□□ -0.36
SCN5A-204ENST00000414099 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
SCN5A-204ENST00000414099 THEMISQ8N1K5 641 aaPredicted RBP12.78□□□□□ -0.36
SCN5A-204ENST00000414099 SMARCE1Q969G3 411 aa12.78□□□□□ -0.36
SCN5A-204ENST00000414099 ERLIN2O94905 339 aa12.77□□□□□ -0.36
SCN5A-204ENST00000414099 PLEKHO1Q53GL0 409 aaPredicted RBP12.77□□□□□ -0.36
SCN5A-204ENST00000414099 EFCAB5A4FU69 1503 aa12.77□□□□□ -0.36
SCN5A-204ENST00000414099 CCDC39Q9UFE4 941 aa12.77□□□□□ -0.36
SCN5A-204ENST00000414099 ZBED9Q6R2W3 1325 aa12.77□□□□□ -0.37
SCN5A-204ENST00000414099 NLRP2Q9NX02 1062 aa12.77□□□□□ -0.37
SCN5A-204ENST00000414099 SMC3Q9UQE7 1217 aa12.77□□□□□ -0.37
SCN5A-204ENST00000414099 CHMP5Q9NZZ3 219 aa12.77□□□□□ -0.37
SCN5A-204ENST00000414099 CCDC27Q2M243 656 aa12.77□□□□□ -0.37
SCN5A-204ENST00000414099 FOXD4L5Q5VV16 416 aaPredicted RBP12.77□□□□□ -0.37
SCN5A-204ENST00000414099 FOXD4L4Q8WXT5 416 aaPredicted RBP12.77□□□□□ -0.37
SCN5A-204ENST00000414099 CCDC30Q5VVM6 783 aa12.76□□□□□ -0.37
SCN5A-204ENST00000414099 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
SCN5A-204ENST00000414099 ERC1Q8IUD2 1116 aa12.76□□□□□ -0.37
SCN5A-204ENST00000414099 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.76□□□□□ -0.37
SCN5A-204ENST00000414099 CAGE1Q8TC20 777 aa12.76□□□□□ -0.37
SCN5A-204ENST00000414099 OFD1O75665 1012 aa12.75□□□□□ -0.37
SCN5A-204ENST00000414099 IKQ13123 557 aaPredicted RBP12.75□□□□□ -0.37
SCN5A-204ENST00000414099 CCDC66A2RUB6 948 aa12.75□□□□□ -0.37
SCN5A-204ENST00000414099 CNTROBQ8N137 903 aa12.75□□□□□ -0.37
SCN5A-204ENST00000414099 ABTB2Q8N961 1025 aa12.75□□□□□ -0.37
SCN5A-204ENST00000414099 LUC7LQ9NQ29 371 aaKnown RBP12.75□□□□□ -0.37
SCN5A-204ENST00000414099 TXLNAP40222 546 aa12.74□□□□□ -0.37
SCN5A-204ENST00000414099 ELL2O00472 640 aaPredicted RBP12.74□□□□□ -0.37
SCN5A-204ENST00000414099 UBTFL1P0CB47 393 aaPredicted RBP12.74□□□□□ -0.37
SCN5A-204ENST00000414099 FILIP1LQ4L180 1135 aa12.73□□□□□ -0.37
SCN5A-204ENST00000414099 MRC2Q9UBG0 1479 aa12.73□□□□□ -0.37
SCN5A-204ENST00000414099 EHBP1L1Q8N3D4 1523 aa12.73□□□□□ -0.37
SCN5A-204ENST00000414099 SYCP1Q15431 976 aa12.73□□□□□ -0.37
SCN5A-204ENST00000414099 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.73□□□□□ -0.37
SCN5A-204ENST00000414099 MAGEC2Q9UBF1 373 aaPredicted RBP12.73□□□□□ -0.37
SCN5A-204ENST00000414099 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
SCN5A-204ENST00000414099 RABEP1Q15276 862 aa12.72□□□□□ -0.37
SCN5A-204ENST00000414099 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
SCN5A-204ENST00000414099 PNISRQ8TF01 805 aaKnown RBP12.72□□□□□ -0.37
SCN5A-204ENST00000414099 H0YHG0 523 aa12.72□□□□□ -0.37
SCN5A-204ENST00000414099 GNAI3P08754 354 aa12.72□□□□□ -0.37
SCN5A-204ENST00000414099 NLRP6P59044 892 aa12.72□□□□□ -0.37
SCN5A-204ENST00000414099 WASHC4Q2M389 1173 aa12.72□□□□□ -0.37
SCN5A-204ENST00000414099 GOLGA6L7A0A1B0GV03 622 aa12.72□□□□□ -0.37
SCN5A-204ENST00000414099 IFT57Q9NWB7 429 aa12.72□□□□□ -0.37
SCN5A-204ENST00000414099 CCDC7Q96M83 1385 aa12.72□□□□□ -0.37
SCN5A-204ENST00000414099 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
SCN5A-204ENST00000414099 NEUROD6Q96NK8 337 aa12.72□□□□□ -0.37
SCN5A-204ENST00000414099 TMEM132AQ24JP5 1023 aa12.71□□□□□ -0.37
SCN5A-204ENST00000414099 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
SCN5A-204ENST00000414099 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.37
SCN5A-204ENST00000414099 PDE4AP27815 886 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms