RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 HRCP23327 699 aa8.13□□□□□ -1.11
HMGB1P11-201ENST00000413899 MTMR2Q13614 643 aa8.13□□□□□ -1.11
HMGB1P11-201ENST00000413899 QPCTQ16769 361 aa8.13□□□□□ -1.11
HMGB1P11-201ENST00000413899 TJAP1Q5JTD0 557 aa8.13□□□□□ -1.11
HMGB1P11-201ENST00000413899 FBXO31Q5XUX0 539 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P11-201ENST00000413899 BRICD5Q6PL45 260 aa8.13□□□□□ -1.11
HMGB1P11-201ENST00000413899 THAP11Q96EK4 314 aa8.13□□□□□ -1.11
HMGB1P11-201ENST00000413899 MTRQ99707 1265 aa8.13□□□□□ -1.11
HMGB1P11-201ENST00000413899 CABLES1Q8TDN4 633 aa8.12□□□□□ -1.11
HMGB1P11-201ENST00000413899 IL21Q9HBE4 155 aa8.12□□□□□ -1.11
HMGB1P11-201ENST00000413899 CSPP1Q1MSJ5 1256 aa8.11□□□□□ -1.11
HMGB1P11-201ENST00000413899 C6orf229H3BNL8 230 aa8.1□□□□□ -1.11
HMGB1P11-201ENST00000413899 ZPR1O75312 459 aa8.1□□□□□ -1.11
HMGB1P11-201ENST00000413899 FMNL1O95466 1100 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P11-201ENST00000413899 RFC5P40937 340 aa8.1□□□□□ -1.11
HMGB1P11-201ENST00000413899 COPS2P61201 443 aa8.1□□□□□ -1.11
HMGB1P11-201ENST00000413899 TMEM259Q4ZIN3 620 aa8.1□□□□□ -1.11
HMGB1P11-201ENST00000413899 RTL5Q5HYW3 569 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P11-201ENST00000413899 RNF19BQ6ZMZ0 732 aa8.1□□□□□ -1.11
HMGB1P11-201ENST00000413899 RETREG3Q86VR2 466 aa8.1□□□□□ -1.11
HMGB1P11-201ENST00000413899 ATP1B4Q9UN42 357 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P11-201ENST00000413899 NUTM2BA6NNL0 878 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P11-201ENST00000413899 NUTM2EB1AL46 878 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P11-201ENST00000413899 ITGBL1O95965 494 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P11-201ENST00000413899 NUTM2DQ5VT03 806 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P11-201ENST00000413899 NUTM2AQ8IVF1 878 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P11-201ENST00000413899 BANK1Q8NDB2 785 aa8.09□□□□□ -1.11
HMGB1P11-201ENST00000413899 MSS51Q4VC12 460 aa8.08□□□□□ -1.12
HMGB1P11-201ENST00000413899 SYMPKQ92797 1274 aaKnown RBP8.08□□□□□ -1.12
HMGB1P11-201ENST00000413899 USB1Q9BQ65 265 aaKnown RBP8.08□□□□□ -1.12
HMGB1P11-201ENST00000413899 CFAP99D6REC4 459 aa8.07□□□□□ -1.12
HMGB1P11-201ENST00000413899 DESI1Q6ICB0 168 aa8.07□□□□□ -1.12
HMGB1P11-201ENST00000413899 SOCS7O14512 581 aa8.06□□□□□ -1.12
HMGB1P11-201ENST00000413899 ADH1BP00325 375 aa8.06□□□□□ -1.12
HMGB1P11-201ENST00000413899 PRR7Q8TB68 274 aa8.06□□□□□ -1.12
HMGB1P11-201ENST00000413899 ZNF516Q92618 1163 aa8.06□□□□□ -1.12
HMGB1P11-201ENST00000413899 SPSB2Q99619 263 aa8.06□□□□□ -1.12
HMGB1P11-201ENST00000413899 FAM160A2Q8N612 972 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P11-201ENST00000413899 TLL1O43897 1013 aa8.04□□□□□ -1.12
HMGB1P11-201ENST00000413899 KCNC4Q03721 635 aa8.04□□□□□ -1.12
HMGB1P11-201ENST00000413899 FLIIQ13045 1269 aa8.04□□□□□ -1.12
HMGB1P11-201ENST00000413899 HELBQ8NG08 1087 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P11-201ENST00000413899 JUNDP17535 347 aa8.03□□□□□ -1.12
HMGB1P11-201ENST00000413899 MMP16P51512 607 aa8.03□□□□□ -1.12
HMGB1P11-201ENST00000413899 AP1G2O75843 785 aa8.02□□□□□ -1.13
HMGB1P11-201ENST00000413899 DXOO77932 396 aaKnown RBP8.02□□□□□ -1.13
HMGB1P11-201ENST00000413899 IFFO2Q5TF58 517 aa8.02□□□□□ -1.13
HMGB1P11-201ENST00000413899 MCM6Q14566 821 aa8.01□□□□□ -1.13
HMGB1P11-201ENST00000413899 LYPD8Q6UX82 237 aa8.01□□□□□ -1.13
HMGB1P11-201ENST00000413899 USP17L8P0C7I0 530 aa8□□□□□ -1.13
HMGB1P11-201ENST00000413899 CTDSPL2Q05D32 466 aa8□□□□□ -1.13
HMGB1P11-201ENST00000413899 ERICH6Q7L0X2 663 aa8□□□□□ -1.13
HMGB1P11-201ENST00000413899 NKX2-3Q8TAU0 364 aa8□□□□□ -1.13
HMGB1P11-201ENST00000413899 SLC6A16Q9GZN6 736 aa8□□□□□ -1.13
HMGB1P11-201ENST00000413899 PTPRNQ16849 979 aa7.99□□□□□ -1.13
HMGB1P11-201ENST00000413899 MTMR14Q8NCE2 650 aa7.99□□□□□ -1.13
HMGB1P11-201ENST00000413899 PRDM9Q9NQV7 894 aa7.99□□□□□ -1.13
HMGB1P11-201ENST00000413899 SNRKQ9NRH2 765 aa7.99□□□□□ -1.13
HMGB1P11-201ENST00000413899 PER1O15534 1290 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P11-201ENST00000413899 APBB1O00213 710 aa7.96□□□□□ -1.14
HMGB1P11-201ENST00000413899 S1PR4O95977 384 aa7.96□□□□□ -1.14
HMGB1P11-201ENST00000413899 LRRN4Q8WUT4 740 aa7.96□□□□□ -1.14
HMGB1P11-201ENST00000413899 TSC1Q92574 1164 aa7.96□□□□□ -1.14
HMGB1P11-201ENST00000413899 F12P00748 615 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P11-201ENST00000413899 EVA1BQ9NVM1 165 aa7.95□□□□□ -1.14
HMGB1P11-201ENST00000413899 CCNYL3P0C7X3 344 aa7.94□□□□□ -1.14
HMGB1P11-201ENST00000413899 GGCXP38435 758 aa7.94□□□□□ -1.14
HMGB1P11-201ENST00000413899 GJD4Q96KN9 370 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P11-201ENST00000413899 NUDT12Q9BQG2 462 aa7.94□□□□□ -1.14
HMGB1P11-201ENST00000413899 TRIM34Q9BYJ4 488 aa7.94□□□□□ -1.14
HMGB1P11-201ENST00000413899 HMX1Q9NP08 348 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P11-201ENST00000413899 KCNH2Q12809 1159 aa7.92□□□□□ -1.14
HMGB1P11-201ENST00000413899 ANKLE1Q8NAG6 615 aa7.92□□□□□ -1.14
HMGB1P11-201ENST00000413899 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.92□□□□□ -1.14
HMGB1P11-201ENST00000413899 PLA2G2EQ9NZK7 142 aa7.92□□□□□ -1.14
HMGB1P11-201ENST00000413899 RNF223E7ERA6 249 aa7.91□□□□□ -1.14
HMGB1P11-201ENST00000413899 UBTFP17480 764 aaKnown RBP7.91□□□□□ -1.14
HMGB1P11-201ENST00000413899 PPP1R18Q6NYC8 613 aa7.91□□□□□ -1.14
HMGB1P11-201ENST00000413899 C14orf37Q86TY3 774 aa7.91□□□□□ -1.14
HMGB1P11-201ENST00000413899 A6NJR5 290 aa7.9□□□□□ -1.14
HMGB1P11-201ENST00000413899 NR6A1Q15406 480 aa7.9□□□□□ -1.14
HMGB1P11-201ENST00000413899 PRM3Q9NNZ6 103 aa7.9□□□□□ -1.14
HMGB1P11-201ENST00000413899 COG6Q9Y2V7 657 aa7.9□□□□□ -1.14
HMGB1P11-201ENST00000413899 FCF1Q9Y324 198 aaKnown RBP7.9□□□□□ -1.14
HMGB1P11-201ENST00000413899 NDUFB9Q9Y6M9 179 aa7.9□□□□□ -1.14
HMGB1P11-201ENST00000413899 EPS8L1Q8TE68 723 aa7.89□□□□□ -1.15
HMGB1P11-201ENST00000413899 MAP10Q9P2G4 905 aa7.89□□□□□ -1.15
HMGB1P11-201ENST00000413899 TIMELESSQ9UNS1 1208 aa7.89□□□□□ -1.15
HMGB1P11-201ENST00000413899 ZC3H4Q9UPT8 1303 aaKnown RBP7.88□□□□□ -1.15
HMGB1P11-201ENST00000413899 A0A0G2JS52 829 aa7.88□□□□□ -1.15
HMGB1P11-201ENST00000413899 PPEF1O14829 653 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P11-201ENST00000413899 GPR37L1O60883 481 aa7.88□□□□□ -1.15
HMGB1P11-201ENST00000413899 CTHP32929 405 aa7.88□□□□□ -1.15
HMGB1P11-201ENST00000413899 PNMA1Q8ND90 353 aa7.88□□□□□ -1.15
HMGB1P11-201ENST00000413899 RAD21O60216 631 aa7.87□□□□□ -1.15
HMGB1P11-201ENST00000413899 PTCRAQ6ISU1 281 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P11-201ENST00000413899 CCDC24Q8N4L8 307 aa7.87□□□□□ -1.15
HMGB1P11-201ENST00000413899 ARMC2Q8NEN0 867 aa7.87□□□□□ -1.15
HMGB1P11-201ENST00000413899 POM121Q96HA1 1249 aa7.87□□□□□ -1.15
HMGB1P11-201ENST00000413899 ZMYND15Q9H091 742 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms