RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 TECPR2O15040 1411 aa28.58■■■□□ 2.17
CPSF7-204ENST00000413232 CDC42BPGQ6DT37 1551 aa28.58■■■□□ 2.17
CPSF7-204ENST00000413232 LRPPRCP42704 1394 aaKnown RBP28.57■■■□□ 2.16
CPSF7-204ENST00000413232 PLEKHH1Q9ULM0 1364 aa28.57■■■□□ 2.16
CPSF7-204ENST00000413232 KNDC1Q76NI1 1749 aa28.57■■■□□ 2.16
CPSF7-204ENST00000413232 RAB3GAP2Q9H2M9 1393 aa28.56■■■□□ 2.16
CPSF7-204ENST00000413232 ABCC11Q96J66 1382 aa28.55■■■□□ 2.16
CPSF7-204ENST00000413232 C8orf37Q96NL8 207 aa28.54■■■□□ 2.16
CPSF7-204ENST00000413232 RXRBP28702 533 aa28.52■■■□□ 2.16
CPSF7-204ENST00000413232 ESCO1Q5FWF5 840 aa28.52■■■□□ 2.16
CPSF7-204ENST00000413232 NUTM2FA1L443 756 aa28.51■■■□□ 2.15
CPSF7-204ENST00000413232 ADAMTS2O95450 1211 aa28.51■■■□□ 2.15
CPSF7-204ENST00000413232 YTHDC2Q9H6S0 1430 aaKnown RBP28.51■■■□□ 2.15
CPSF7-204ENST00000413232 NRXN1Q9ULB1 1477 aa28.49■■■□□ 2.15
CPSF7-204ENST00000413232 C14orf93Q9H972 538 aaKnown RBP28.49■■■□□ 2.15
CPSF7-204ENST00000413232 ACIN1Q9UKV3 1341 aaKnown RBP28.48■■■□□ 2.15
CPSF7-204ENST00000413232 CFAP70Q5T0N1 1121 aa28.48■■■□□ 2.15
CPSF7-204ENST00000413232 PXDNQ92626 1479 aa28.47■■■□□ 2.15
CPSF7-204ENST00000413232 XPCQ01831 940 aaPredicted RBP28.47■■■□□ 2.15
CPSF7-204ENST00000413232 RGPD8O14715 1765 aaPredicted RBP28.47■■■□□ 2.15
CPSF7-204ENST00000413232 COL22A1Q8NFW1 1626 aaPredicted RBP28.47■■■□□ 2.15
CPSF7-204ENST00000413232 FMN2Q9NZ56 1722 aa28.46■■■□□ 2.15
CPSF7-204ENST00000413232 FOXO3O43524 673 aa28.46■■■□□ 2.15
CPSF7-204ENST00000413232 QTRT2Q9H974 415 aaKnown RBP28.45■■■□□ 2.14
CPSF7-204ENST00000413232 MYOM2P54296 1465 aa28.45■■■□□ 2.14
CPSF7-204ENST00000413232 UPF1Q92900 1129 aaKnown RBP eCLIP28.44■■■□□ 2.14
CPSF7-204ENST00000413232 NGLY1Q96IV0 654 aa28.44■■■□□ 2.14
CPSF7-204ENST00000413232 CDK12Q9NYV4 1490 aaPredicted RBP28.44■■■□□ 2.14
CPSF7-204ENST00000413232 NPHP3Q7Z494 1330 aa28.43■■■□□ 2.14
CPSF7-204ENST00000413232 SIRT1Q96EB6 747 aa28.4■■■□□ 2.14
CPSF7-204ENST00000413232 RGS12O14924 1447 aa28.38■■■□□ 2.13
CPSF7-204ENST00000413232 RBM6P78332 1123 aaKnown RBP28.38■■■□□ 2.13
CPSF7-204ENST00000413232 MARF1Q9Y4F3 1742 aaKnown RBP28.38■■■□□ 2.13
CPSF7-204ENST00000413232 DHX57Q6P158 1386 aaKnown RBP28.37■■■□□ 2.13
CPSF7-204ENST00000413232 FNBP4Q8N3X1 1017 aaPredicted RBP28.35■■■□□ 2.13
CPSF7-204ENST00000413232 USP21Q9UK80 565 aa28.35■■■□□ 2.13
CPSF7-204ENST00000413232 SAFB2Q14151 953 aaKnown RBP eCLIP28.34■■■□□ 2.13
CPSF7-204ENST00000413232 PRAM1Q96QH2 718 aa28.34■■■□□ 2.13
CPSF7-204ENST00000413232 KIF1AQ12756 1690 aa28.33■■■□□ 2.13
CPSF7-204ENST00000413232 ADGRB1O14514 1584 aa28.33■■■□□ 2.12
CPSF7-204ENST00000413232 KDM2AQ9Y2K7 1162 aa28.3■■■□□ 2.12
CPSF7-204ENST00000413232 DLC1Q96QB1 1528 aa28.29■■■□□ 2.12
CPSF7-204ENST00000413232 SPATA31A3Q5VYP0 1347 aa28.29■■■□□ 2.12
CPSF7-204ENST00000413232 KRT28Q7Z3Y7 464 aa28.28■■■□□ 2.12
CPSF7-204ENST00000413232 USP32Q8NFA0 1604 aa28.28■■■□□ 2.12
CPSF7-204ENST00000413232 BCL9LQ86UU0 1499 aa28.27■■■□□ 2.12
CPSF7-204ENST00000413232 ATRNO75882 1429 aa28.27■■■□□ 2.12
CPSF7-204ENST00000413232 DCAF11Q8TEB1 546 aa28.27■■■□□ 2.12
CPSF7-204ENST00000413232 TRPC5Q9UL62 973 aaPredicted RBP28.27■■■□□ 2.12
CPSF7-204ENST00000413232 PHF8Q9UPP1 1060 aa28.27■■■□□ 2.12
CPSF7-204ENST00000413232 HRCP23327 699 aa28.26■■■□□ 2.11
CPSF7-204ENST00000413232 TRAK1Q9UPV9 953 aa28.25■■■□□ 2.11
CPSF7-204ENST00000413232 POGKQ9P215 609 aa28.24■■■□□ 2.11
CPSF7-204ENST00000413232 ADGRB2O60241 1585 aa28.21■■■□□ 2.11
CPSF7-204ENST00000413232 HIRIP3Q9BW71 556 aaPredicted RBP28.21■■■□□ 2.11
CPSF7-204ENST00000413232 PMFBP1Q8TBY8 1022 aa28.19■■■□□ 2.1
CPSF7-204ENST00000413232 TNS3Q68CZ2 1445 aa28.18■■■□□ 2.1
CPSF7-204ENST00000413232 CABLES1Q8TDN4 633 aa28.18■■■□□ 2.1
CPSF7-204ENST00000413232 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.18■■■□□ 2.1
CPSF7-204ENST00000413232 MINK1Q8N4C8 1332 aaPredicted RBP28.17■■■□□ 2.1
CPSF7-204ENST00000413232 SLIT2O94813 1529 aa28.16■■■□□ 2.1
CPSF7-204ENST00000413232 EP400Q96L91 3159 aa28.16■■■□□ 2.1
CPSF7-204ENST00000413232 ANKARQ7Z5J8 1434 aa28.16■■■□□ 2.1
CPSF7-204ENST00000413232 PRR36Q9H6K5 1346 aa28.16■■■□□ 2.1
CPSF7-204ENST00000413232 ABCA3Q99758 1704 aa28.15■■■□□ 2.1
CPSF7-204ENST00000413232 PLEKHG5O94827 1062 aa28.15■■■□□ 2.1
CPSF7-204ENST00000413232 PSME1Q06323 249 aa28.15■■■□□ 2.1
CPSF7-204ENST00000413232 GJD4Q96KN9 370 aaPredicted RBP28.14■■■□□ 2.1
CPSF7-204ENST00000413232 SBNO1A3KN83 1393 aa28.13■■■□□ 2.09
CPSF7-204ENST00000413232 ARHGEF28Q8N1W1 1705 aaKnown RBP28.13■■■□□ 2.09
CPSF7-204ENST00000413232 TRPM3Q9HCF6 1732 aaPredicted RBP28.13■■■□□ 2.09
CPSF7-204ENST00000413232 STAC3Q96MF2 364 aa28.12■■■□□ 2.09
CPSF7-204ENST00000413232 GLI3P10071 1580 aa28.11■■■□□ 2.09
CPSF7-204ENST00000413232 UNC5CLQ8IV45 518 aa28.11■■■□□ 2.09
CPSF7-204ENST00000413232 LMOD2Q6P5Q4 547 aa28.1■■■□□ 2.09
CPSF7-204ENST00000413232 ATAD2Q6PL18 1390 aa28.1■■■□□ 2.09
CPSF7-204ENST00000413232 WASLO00401 505 aaPredicted RBP28.09■■■□□ 2.09
CPSF7-204ENST00000413232 TULP4Q9NRJ4 1543 aa28.08■■■□□ 2.09
CPSF7-204ENST00000413232 PLCH1Q4KWH8 1693 aa28.08■■■□□ 2.09
CPSF7-204ENST00000413232 RALGAPBQ86X10 1494 aa28.08■■■□□ 2.09
CPSF7-204ENST00000413232 ALS2Q96Q42 1657 aa28.07■■■□□ 2.08
CPSF7-204ENST00000413232 BRWD3Q6RI45 1802 aa28.06■■■□□ 2.08
CPSF7-204ENST00000413232 ARHGEF10O15013 1369 aa28.05■■■□□ 2.08
CPSF7-204ENST00000413232 HAP1P54257 671 aaPredicted RBP28.05■■■□□ 2.08
CPSF7-204ENST00000413232 NWD2Q9ULI1 1742 aa28.04■■■□□ 2.08
CPSF7-204ENST00000413232 FAM83GA6ND36 823 aa28.02■■■□□ 2.08
CPSF7-204ENST00000413232 KIAA1210Q9ULL0 1709 aa28.01■■■□□ 2.07
CPSF7-204ENST00000413232 EIF3AQ14152 1382 aaKnown RBP28■■■□□ 2.07
CPSF7-204ENST00000413232 CRYBG1Q9Y4K1 1723 aa27.99■■■□□ 2.07
CPSF7-204ENST00000413232 NBPF1Q3BBV0 1214 aa27.99■■■□□ 2.07
CPSF7-204ENST00000413232 ATP7BP35670 1465 aa27.99■■■□□ 2.07
CPSF7-204ENST00000413232 GPRASP1Q5JY77 1395 aa27.99■■■□□ 2.07
CPSF7-204ENST00000413232 VPS72Q15906 364 aa27.98■■■□□ 2.07
CPSF7-204ENST00000413232 ITSN1Q15811 1721 aa27.98■■■□□ 2.07
CPSF7-204ENST00000413232 NUDT16Q96DE0 195 aaKnown RBP27.97■■■□□ 2.07
CPSF7-204ENST00000413232 NRAPQ86VF7 1730 aa27.96■■■□□ 2.07
CPSF7-204ENST00000413232 NGDNQ8NEJ9 315 aaKnown RBP27.96■■■□□ 2.07
CPSF7-204ENST00000413232 CDK19Q9BWU1 502 aa27.95■■■□□ 2.06
CPSF7-204ENST00000413232 SEPT12Q8IYM1 358 aa27.93■■■□□ 2.06
CPSF7-204ENST00000413232 TOPAZ1Q8N9V7 1692 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms