RNA–Protein interactions for RNA: ENST00000412845.1

NEFHP1-201, Transcript of neurofilament heavy pseudogene 1, humanhuman

BASIC

Gene NEFHP1, Length 2,629 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP1-201ENST00000412845 MYOM2P54296 1465 aa24.04■■□□□ 1.44
NEFHP1-201ENST00000412845 VWDEQ8N2E2 1590 aa24.04■■□□□ 1.44
NEFHP1-201ENST00000412845 KANK1Q14678 1352 aa24.04■■□□□ 1.44
NEFHP1-201ENST00000412845 IQSEC2Q5JU85 1478 aa24.04■■□□□ 1.44
NEFHP1-201ENST00000412845 SLC24A1O60721 1099 aa24.03■■□□□ 1.44
NEFHP1-201ENST00000412845 FAM43AQ8N2R8 423 aa24.03■■□□□ 1.44
NEFHP1-201ENST00000412845 PHF23Q9BUL5 403 aaPredicted RBP24.03■■□□□ 1.44
NEFHP1-201ENST00000412845 TBC1D2Q9BYX2 928 aa24.03■■□□□ 1.44
NEFHP1-201ENST00000412845 SLC12A5Q9H2X9 1139 aa24.02■■□□□ 1.44
NEFHP1-201ENST00000412845 KIF1BO60333 1816 aa24.01■■□□□ 1.43
NEFHP1-201ENST00000412845 MROH2AA6NES4 1674 aa24■■□□□ 1.43
NEFHP1-201ENST00000412845 IFT172Q9UG01 1749 aa24■■□□□ 1.43
NEFHP1-201ENST00000412845 MYO3AQ8NEV4 1616 aa24■■□□□ 1.43
NEFHP1-201ENST00000412845 NEURL4Q96JN8 1562 aa24■■□□□ 1.43
NEFHP1-201ENST00000412845 UPF2Q9HAU5 1272 aaKnown RBP23.99■■□□□ 1.43
NEFHP1-201ENST00000412845 EIF5BO60841 1220 aaKnown RBP23.98■■□□□ 1.43
NEFHP1-201ENST00000412845 ATP7AQ04656 1500 aa23.98■■□□□ 1.43
NEFHP1-201ENST00000412845 SBNO2Q9Y2G9 1366 aa23.98■■□□□ 1.43
NEFHP1-201ENST00000412845 MTHFSP49914 203 aa23.97■■□□□ 1.43
NEFHP1-201ENST00000412845 WDR63Q8IWG1 891 aa23.97■■□□□ 1.43
NEFHP1-201ENST00000412845 SPRYD3Q8NCJ5 442 aa23.97■■□□□ 1.43
NEFHP1-201ENST00000412845 TRAK1Q9UPV9 953 aa23.97■■□□□ 1.43
NEFHP1-201ENST00000412845 MROH1Q8NDA8 1641 aa23.96■■□□□ 1.43
NEFHP1-201ENST00000412845 AAMPQ13685 434 aa23.96■■□□□ 1.43
NEFHP1-201ENST00000412845 RWDD1Q9H446 243 aaPredicted RBP23.95■■□□□ 1.42
NEFHP1-201ENST00000412845 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.42
NEFHP1-201ENST00000412845 NOS1P29475 1434 aa23.94■■□□□ 1.42
NEFHP1-201ENST00000412845 NRXN1Q9ULB1 1477 aa23.94■■□□□ 1.42
NEFHP1-201ENST00000412845 ZMYM3Q14202 1370 aa23.93■■□□□ 1.42
NEFHP1-201ENST00000412845 ZNF518AQ6AHZ1 1483 aa23.92■■□□□ 1.42
NEFHP1-201ENST00000412845 ARXQ96QS3 562 aa23.92■■□□□ 1.42
NEFHP1-201ENST00000412845 MVPQ14764 893 aaKnown RBP23.92■■□□□ 1.42
NEFHP1-201ENST00000412845 CHGAP10645 457 aaKnown RBP23.91■■□□□ 1.42
NEFHP1-201ENST00000412845 CCDC27Q2M243 656 aa23.91■■□□□ 1.42
NEFHP1-201ENST00000412845 RRAGDQ9NQL2 400 aaPredicted RBP23.91■■□□□ 1.42
NEFHP1-201ENST00000412845 ZC3H13Q5T200 1668 aaKnown RBP23.9■■□□□ 1.42
NEFHP1-201ENST00000412845 QRICH2Q9H0J4 1663 aa23.9■■□□□ 1.42
NEFHP1-201ENST00000412845 UHRF1BP1LA0JNW5 1464 aa23.9■■□□□ 1.42
NEFHP1-201ENST00000412845 ARAP3Q8WWN8 1544 aa23.89■■□□□ 1.42
NEFHP1-201ENST00000412845 CFAP65Q6ZU64 1925 aaKnown RBP23.89■■□□□ 1.42
NEFHP1-201ENST00000412845 TMEM132EQ6IEE7 984 aa23.89■■□□□ 1.42
NEFHP1-201ENST00000412845 EFCAB6Q5THR3 1501 aa23.89■■□□□ 1.41
NEFHP1-201ENST00000412845 L1TD1Q5T7N2 865 aaKnown RBP23.88■■□□□ 1.41
NEFHP1-201ENST00000412845 TSR2Q969E8 191 aaKnown RBP23.88■■□□□ 1.41
NEFHP1-201ENST00000412845 MYH16Q9H6N6 1097 aa23.88■■□□□ 1.41
NEFHP1-201ENST00000412845 PPRC1Q5VV67 1664 aaKnown RBP23.88■■□□□ 1.41
NEFHP1-201ENST00000412845 FANCAO15360 1455 aa23.87■■□□□ 1.41
NEFHP1-201ENST00000412845 U2AF1L5P0DN76 240 aaPredicted RBP23.87■■□□□ 1.41
NEFHP1-201ENST00000412845 U2AF1Q01081 240 aaKnown RBP eCLIP23.87■■□□□ 1.41
NEFHP1-201ENST00000412845 MFAP1P55081 439 aaKnown RBP23.86■■□□□ 1.41
NEFHP1-201ENST00000412845 ZKSCAN2Q63HK3 967 aa23.86■■□□□ 1.41
NEFHP1-201ENST00000412845 DZIP1LQ8IYY4 767 aaKnown RBP23.86■■□□□ 1.41
NEFHP1-201ENST00000412845 CFAP53Q96M91 514 aa23.86■■□□□ 1.41
NEFHP1-201ENST00000412845 SETBP1Q9Y6X0 1596 aa23.86■■□□□ 1.41
NEFHP1-201ENST00000412845 FTSJ3Q8IY81 847 aaKnown RBP23.86■■□□□ 1.41
NEFHP1-201ENST00000412845 RSPH6AQ9H0K4 717 aa23.86■■□□□ 1.41
NEFHP1-201ENST00000412845 MCM4P33991 863 aa23.85■■□□□ 1.41
NEFHP1-201ENST00000412845 C22orf23Q9BZE7 217 aa23.85■■□□□ 1.41
NEFHP1-201ENST00000412845 GZF1Q9H116 711 aaPredicted RBP23.85■■□□□ 1.41
NEFHP1-201ENST00000412845 XRCC6P12956 609 aaKnown RBP eCLIP23.84■■□□□ 1.41
NEFHP1-201ENST00000412845 ABCA9Q8IUA7 1624 aa23.83■■□□□ 1.41
NEFHP1-201ENST00000412845 ADGRB3O60242 1522 aa23.83■■□□□ 1.41
NEFHP1-201ENST00000412845 C14orf93Q9H972 538 aaKnown RBP23.83■■□□□ 1.41
NEFHP1-201ENST00000412845 USP32Q8NFA0 1604 aa23.83■■□□□ 1.4
NEFHP1-201ENST00000412845 ADGRB1O14514 1584 aa23.82■■□□□ 1.4
NEFHP1-201ENST00000412845 TRIM27P14373 513 aa23.81■■□□□ 1.4
NEFHP1-201ENST00000412845 ADGRL1O94910 1474 aa23.81■■□□□ 1.4
NEFHP1-201ENST00000412845 SMC4Q9NTJ3 1288 aa23.81■■□□□ 1.4
NEFHP1-201ENST00000412845 FSD2A1L4K1 749 aa23.8■■□□□ 1.4
NEFHP1-201ENST00000412845 EXOSC9Q06265 439 aaKnown RBP23.8■■□□□ 1.4
NEFHP1-201ENST00000412845 PANK2Q9BZ23 570 aa23.8■■□□□ 1.4
NEFHP1-201ENST00000412845 ADGRB2O60241 1585 aa23.8■■□□□ 1.4
NEFHP1-201ENST00000412845 PPLO60437 1756 aa23.79■■□□□ 1.4
NEFHP1-201ENST00000412845 GOLGA6L3A6NEY3 463 aa23.79■■□□□ 1.4
NEFHP1-201ENST00000412845 ITPRIPQ8IWB1 547 aa23.78■■□□□ 1.4
NEFHP1-201ENST00000412845 SSH1Q8WYL5 1049 aa23.78■■□□□ 1.4
NEFHP1-201ENST00000412845 CHMP5Q9NZZ3 219 aa23.78■■□□□ 1.4
NEFHP1-201ENST00000412845 HDAC1Q13547 482 aaPredicted RBP23.77■■□□□ 1.4
NEFHP1-201ENST00000412845 CD109Q6YHK3 1445 aa23.76■■□□□ 1.39
NEFHP1-201ENST00000412845 KIDINS220Q9ULH0 1771 aa23.75■■□□□ 1.39
NEFHP1-201ENST00000412845 TRAK2O60296 914 aa23.75■■□□□ 1.39
NEFHP1-201ENST00000412845 NUTM2DQ5VT03 806 aaPredicted RBP23.75■■□□□ 1.39
NEFHP1-201ENST00000412845 NCBP3Q53F19 620 aaKnown RBP23.74■■□□□ 1.39
NEFHP1-201ENST00000412845 TRIM35Q9UPQ4 493 aa23.74■■□□□ 1.39
NEFHP1-201ENST00000412845 ANKRD36BQ8N2N9 1353 aa23.74■■□□□ 1.39
NEFHP1-201ENST00000412845 U2SURPO15042 1029 aaKnown RBP23.73■■□□□ 1.39
NEFHP1-201ENST00000412845 ATF7IPQ6VMQ6 1270 aa23.73■■□□□ 1.39
NEFHP1-201ENST00000412845 PLEKHF1Q96S99 279 aa23.73■■□□□ 1.39
NEFHP1-201ENST00000412845 CABP2Q9NPB3 220 aa23.73■■□□□ 1.39
NEFHP1-201ENST00000412845 NOB1Q9ULX3 412 aaKnown RBP23.73■■□□□ 1.39
NEFHP1-201ENST00000412845 DDX19BQ9UMR2 479 aa23.73■■□□□ 1.39
NEFHP1-201ENST00000412845 TULP4Q9NRJ4 1543 aa23.73■■□□□ 1.39
NEFHP1-201ENST00000412845 TMPOP42166 694 aaKnown RBP23.73■■□□□ 1.39
NEFHP1-201ENST00000412845 ZNF692Q9BU19 519 aaPredicted RBP23.73■■□□□ 1.39
NEFHP1-201ENST00000412845 CT47B1P0C2W7 299 aaPredicted RBP23.72■■□□□ 1.39
NEFHP1-201ENST00000412845 SMC5Q8IY18 1101 aa23.72■■□□□ 1.39
NEFHP1-201ENST00000412845 NPATQ14207 1427 aa23.72■■□□□ 1.39
NEFHP1-201ENST00000412845 LMTK2Q8IWU2 1503 aa23.72■■□□□ 1.39
NEFHP1-201ENST00000412845 TMEM57Q8N5G2 664 aa23.72■■□□□ 1.39
NEFHP1-201ENST00000412845 UBE2Q2Q8WVN8 375 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms