RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 PRAM1Q96QH2 718 aa19.96■□□□□ 0.79
CPNE1-206ENST00000412056 ROBO1Q9Y6N7 1651 aa19.95■□□□□ 0.78
CPNE1-206ENST00000412056 PIP4K2BP78356 416 aa19.95■□□□□ 0.78
CPNE1-206ENST00000412056 ILDR1Q86SU0 546 aaPredicted RBP19.95■□□□□ 0.78
CPNE1-206ENST00000412056 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
CPNE1-206ENST00000412056 FMN2Q9NZ56 1722 aa19.94■□□□□ 0.78
CPNE1-206ENST00000412056 SAFB2Q14151 953 aaKnown RBP eCLIP19.94■□□□□ 0.783e-13■□□□□ 9.1
CPNE1-206ENST00000412056 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
CPNE1-206ENST00000412056 GPRASP1Q5JY77 1395 aa19.94■□□□□ 0.78
CPNE1-206ENST00000412056 QRICH2Q9H0J4 1663 aa19.94■□□□□ 0.78
CPNE1-206ENST00000412056 ADGRB2O60241 1585 aa19.93■□□□□ 0.78
CPNE1-206ENST00000412056 ATF3P18847 181 aa19.93■□□□□ 0.78
CPNE1-206ENST00000412056 CADPS2Q86UW7 1296 aa19.93■□□□□ 0.78
CPNE1-206ENST00000412056 POGKQ9P215 609 aa19.93■□□□□ 0.78
CPNE1-206ENST00000412056 MST1RQ04912 1400 aa19.93■□□□□ 0.78
CPNE1-206ENST00000412056 RGPD8O14715 1765 aaPredicted RBP19.91■□□□□ 0.78
CPNE1-206ENST00000412056 SLAIN2Q9P270 581 aa19.89■□□□□ 0.77
CPNE1-206ENST00000412056 MINK1Q8N4C8 1332 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-206ENST00000412056 C1orf167Q5SNV9 1468 aa19.86■□□□□ 0.77
CPNE1-206ENST00000412056 HIRIP3Q9BW71 556 aaPredicted RBP19.86■□□□□ 0.77
CPNE1-206ENST00000412056 CARD11Q9BXL7 1154 aa19.86■□□□□ 0.77
CPNE1-206ENST00000412056 CENPJQ9HC77 1338 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-206ENST00000412056 USP32Q8NFA0 1604 aa19.85■□□□□ 0.77
CPNE1-206ENST00000412056 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.77
CPNE1-206ENST00000412056 PHLPP1O60346 1717 aa19.83■□□□□ 0.77
CPNE1-206ENST00000412056 NHSL1Q5SYE7 1610 aa19.83■□□□□ 0.76
CPNE1-206ENST00000412056 NUTM2FA1L443 756 aa19.82■□□□□ 0.76
CPNE1-206ENST00000412056 BRINP3Q76B58 766 aa19.81■□□□□ 0.76
CPNE1-206ENST00000412056 TULP4Q9NRJ4 1543 aa19.81■□□□□ 0.76
CPNE1-206ENST00000412056 AHDC1Q5TGY3 1603 aaPredicted RBP19.8■□□□□ 0.76
CPNE1-206ENST00000412056 ITSN1Q15811 1721 aa19.79■□□□□ 0.76
CPNE1-206ENST00000412056 KIF1AQ12756 1690 aa19.79■□□□□ 0.76
CPNE1-206ENST00000412056 HSPA1LP34931 641 aa19.79■□□□□ 0.76
CPNE1-206ENST00000412056 WASLO00401 505 aaPredicted RBP19.78■□□□□ 0.76
CPNE1-206ENST00000412056 ORAI2Q96SN7 254 aa19.78■□□□□ 0.76
CPNE1-206ENST00000412056 TOPAZ1Q8N9V7 1692 aa19.78■□□□□ 0.76
CPNE1-206ENST00000412056 ANKARQ7Z5J8 1434 aa19.77■□□□□ 0.76
CPNE1-206ENST00000412056 COL16A1Q07092 1604 aaPredicted RBP19.77■□□□□ 0.76
CPNE1-206ENST00000412056 ATP7BP35670 1465 aa19.76■□□□□ 0.75
CPNE1-206ENST00000412056 PRR36Q9H6K5 1346 aa19.76■□□□□ 0.75
CPNE1-206ENST00000412056 USP47Q96K76 1375 aa19.75■□□□□ 0.75
CPNE1-206ENST00000412056 ESCO1Q5FWF5 840 aa19.74■□□□□ 0.75
CPNE1-206ENST00000412056 CDK19Q9BWU1 502 aa19.74■□□□□ 0.75
CPNE1-206ENST00000412056 SBNO2Q9Y2G9 1366 aa19.73■□□□□ 0.75
CPNE1-206ENST00000412056 DDX17Q92841 729 aaKnown RBP19.73■□□□□ 0.75
CPNE1-206ENST00000412056 ST20-MTHFSA0A0A6YYL1 179 aa19.71■□□□□ 0.75
CPNE1-206ENST00000412056 SRPK2P78362 688 aaKnown RBP19.69■□□□□ 0.74
CPNE1-206ENST00000412056 PHF8Q9UPP1 1060 aa19.69■□□□□ 0.74
CPNE1-206ENST00000412056 EVC2Q86UK5 1308 aa19.69■□□□□ 0.74
CPNE1-206ENST00000412056 NUDT16Q96DE0 195 aaKnown RBP19.68■□□□□ 0.74
CPNE1-206ENST00000412056 CABP2Q9NPB3 220 aa19.68■□□□□ 0.74
CPNE1-206ENST00000412056 PXDNQ92626 1479 aa19.67■□□□□ 0.74
CPNE1-206ENST00000412056 TESK2Q96S53 571 aa19.67■□□□□ 0.74
CPNE1-206ENST00000412056 SHPRHQ149N8 1683 aa19.67■□□□□ 0.74
CPNE1-206ENST00000412056 FOXO3O43524 673 aa19.66■□□□□ 0.74
CPNE1-206ENST00000412056 PMFBP1Q8TBY8 1022 aa19.66■□□□□ 0.74
CPNE1-206ENST00000412056 XPCQ01831 940 aaPredicted RBP19.65■□□□□ 0.74
CPNE1-206ENST00000412056 NPHP3Q7Z494 1330 aa19.65■□□□□ 0.74
CPNE1-206ENST00000412056 TRPM3Q9HCF6 1732 aaPredicted RBP19.65■□□□□ 0.74
CPNE1-206ENST00000412056 SOS2Q07890 1332 aaPredicted RBP19.64■□□□□ 0.73
CPNE1-206ENST00000412056 PPIP5K1Q6PFW1 1433 aa19.63■□□□□ 0.73
CPNE1-206ENST00000412056 AKAP12Q02952 1782 aa19.62■□□□□ 0.73
CPNE1-206ENST00000412056 CCDC61Q9Y6R9 512 aa19.62■□□□□ 0.73
CPNE1-206ENST00000412056 DISP3Q9P2K9 1392 aa19.61■□□□□ 0.73
CPNE1-206ENST00000412056 HSPA5P11021 654 aaKnown RBP19.61■□□□□ 0.73
CPNE1-206ENST00000412056 ATAD2Q6PL18 1390 aa19.6■□□□□ 0.73
CPNE1-206ENST00000412056 JCADQ9P266 1359 aa19.6■□□□□ 0.73
CPNE1-206ENST00000412056 EIF4G2P78344 907 aaKnown RBP eCLIP19.6■□□□□ 0.73
CPNE1-206ENST00000412056 KRT28Q7Z3Y7 464 aa19.59■□□□□ 0.73
CPNE1-206ENST00000412056 ALS2Q96Q42 1657 aa19.59■□□□□ 0.73
CPNE1-206ENST00000412056 POLR3AO14802 1390 aaPredicted RBP19.58■□□□□ 0.73
CPNE1-206ENST00000412056 PNPLA6Q8IY17 1366 aa19.58■□□□□ 0.73
CPNE1-206ENST00000412056 PLEKHG3A1L390 1219 aa19.58■□□□□ 0.72
CPNE1-206ENST00000412056 NGDNQ8NEJ9 315 aaKnown RBP19.58■□□□□ 0.72
CPNE1-206ENST00000412056 LRRC59Q96AG4 307 aaKnown RBP19.58■□□□□ 0.72
CPNE1-206ENST00000412056 COL22A1Q8NFW1 1626 aaPredicted RBP19.58■□□□□ 0.72
CPNE1-206ENST00000412056 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
CPNE1-206ENST00000412056 ACEP12821 1306 aa19.57■□□□□ 0.72
CPNE1-206ENST00000412056 CABP1Q9NZU7 370 aa19.57■□□□□ 0.72
CPNE1-206ENST00000412056 MON2Q7Z3U7 1717 aa19.56■□□□□ 0.72
CPNE1-206ENST00000412056 TMF1P82094 1093 aa19.56■□□□□ 0.72
CPNE1-206ENST00000412056 PSME1Q06323 249 aa19.56■□□□□ 0.72
CPNE1-206ENST00000412056 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
CPNE1-206ENST00000412056 MYOM1P52179 1685 aa19.56■□□□□ 0.72
CPNE1-206ENST00000412056 SBNO1A3KN83 1393 aa19.55■□□□□ 0.72
CPNE1-206ENST00000412056 SPATA31A3Q5VYP0 1347 aa19.54■□□□□ 0.72
CPNE1-206ENST00000412056 ABCA3Q99758 1704 aa19.54■□□□□ 0.72
CPNE1-206ENST00000412056 SLC24A1O60721 1099 aa19.54■□□□□ 0.72
CPNE1-206ENST00000412056 NRKQ7Z2Y5 1582 aa19.53■□□□□ 0.72
CPNE1-206ENST00000412056 PUS7Q96PZ0 661 aaKnown RBP19.53■□□□□ 0.72
CPNE1-206ENST00000412056 LRP6O75581 1613 aa19.53■□□□□ 0.72
CPNE1-206ENST00000412056 CD163L1Q9NR16 1453 aa19.52■□□□□ 0.72
CPNE1-206ENST00000412056 USP6P35125 1406 aa19.51■□□□□ 0.71
CPNE1-206ENST00000412056 CRYBG1Q9Y4K1 1723 aa19.51■□□□□ 0.71
CPNE1-206ENST00000412056 CPSF1Q10570 1443 aaKnown RBP19.51■□□□□ 0.71
CPNE1-206ENST00000412056 SPATA31A6Q5VVP1 1343 aa19.51■□□□□ 0.71
CPNE1-206ENST00000412056 TMC1Q8TDI8 760 aa19.5■□□□□ 0.71
CPNE1-206ENST00000412056 SLC12A5Q9H2X9 1139 aa19.5■□□□□ 0.71
CPNE1-206ENST00000412056 MARF1Q9Y4F3 1742 aaKnown RBP19.5■□□□□ 0.71
CPNE1-206ENST00000412056 ARHGEF10O15013 1369 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms