RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 POLR3AO14802 1390 aaPredicted RBP18.42■□□□□ 0.54
ATRIP-204ENST00000412052 NRXN1Q9ULB1 1477 aa18.42■□□□□ 0.54
ATRIP-204ENST00000412052 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
ATRIP-204ENST00000412052 DAXXQ9UER7 740 aaPredicted RBP18.42■□□□□ 0.54
ATRIP-204ENST00000412052 MTHFSP49914 203 aa18.41■□□□□ 0.54
ATRIP-204ENST00000412052 NPATQ14207 1427 aa18.41■□□□□ 0.54
ATRIP-204ENST00000412052 CLUAP1Q96AJ1 413 aa18.41■□□□□ 0.54
ATRIP-204ENST00000412052 ADGRB3O60242 1522 aa18.4■□□□□ 0.54
ATRIP-204ENST00000412052 MYO3AQ8NEV4 1616 aa18.39■□□□□ 0.53
ATRIP-204ENST00000412052 USP19O94966 1318 aa18.39■□□□□ 0.53
ATRIP-204ENST00000412052 RARSP54136 660 aaKnown RBP18.38■□□□□ 0.53
ATRIP-204ENST00000412052 NEURL4Q96JN8 1562 aa18.38■□□□□ 0.53
ATRIP-204ENST00000412052 QRICH2Q9H0J4 1663 aa18.38■□□□□ 0.53
ATRIP-204ENST00000412052 C14orf93Q9H972 538 aaKnown RBP18.38■□□□□ 0.53
ATRIP-204ENST00000412052 SBNO2Q9Y2G9 1366 aa18.37■□□□□ 0.53
ATRIP-204ENST00000412052 CGNL1Q0VF96 1302 aa18.37■□□□□ 0.53
ATRIP-204ENST00000412052 RUNDC1Q96C34 613 aa18.37■□□□□ 0.53
ATRIP-204ENST00000412052 PCDHB15Q9Y5E8 787 aa18.37■□□□□ 0.53
ATRIP-204ENST00000412052 ADGRB1O14514 1584 aa18.37■□□□□ 0.53
ATRIP-204ENST00000412052 FRAT2O75474 233 aaPredicted RBP18.36■□□□□ 0.53
ATRIP-204ENST00000412052 PDE3AQ14432 1141 aa18.36■□□□□ 0.53
ATRIP-204ENST00000412052 ZNF518AQ6AHZ1 1483 aa18.36■□□□□ 0.53
ATRIP-204ENST00000412052 CABP2Q9NPB3 220 aa18.36■□□□□ 0.53
ATRIP-204ENST00000412052 IQSEC2Q5JU85 1478 aa18.35■□□□□ 0.53
ATRIP-204ENST00000412052 ZC3H13Q5T200 1668 aaKnown RBP18.34■□□□□ 0.53
ATRIP-204ENST00000412052 BRPF3Q9ULD4 1205 aa18.34■□□□□ 0.53
ATRIP-204ENST00000412052 FRMPD1Q5SYB0 1578 aa18.34■□□□□ 0.53
ATRIP-204ENST00000412052 PPLO60437 1756 aa18.33■□□□□ 0.53
ATRIP-204ENST00000412052 SLC24A1O60721 1099 aa18.33■□□□□ 0.52
ATRIP-204ENST00000412052 U2AF1L5P0DN76 240 aaPredicted RBP18.33■□□□□ 0.52
ATRIP-204ENST00000412052 U2AF1Q01081 240 aaKnown RBP eCLIP18.33■□□□□ 0.52
ATRIP-204ENST00000412052 TSR2Q969E8 191 aaKnown RBP18.32■□□□□ 0.52
ATRIP-204ENST00000412052 GSE1Q14687 1217 aa18.32■□□□□ 0.52
ATRIP-204ENST00000412052 SETBP1Q9Y6X0 1596 aa18.32■□□□□ 0.52
ATRIP-204ENST00000412052 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
ATRIP-204ENST00000412052 STK26Q9P289 416 aa18.31■□□□□ 0.52
ATRIP-204ENST00000412052 LMTK2Q8IWU2 1503 aa18.31■□□□□ 0.52
ATRIP-204ENST00000412052 RAPGEF3O95398 923 aa18.3■□□□□ 0.52
ATRIP-204ENST00000412052 TULP4Q9NRJ4 1543 aa18.3■□□□□ 0.52
ATRIP-204ENST00000412052 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
ATRIP-204ENST00000412052 SIGLEC1Q9BZZ2 1709 aa18.28■□□□□ 0.52
ATRIP-204ENST00000412052 GGNBP2Q9H3C7 697 aa18.28■□□□□ 0.52
ATRIP-204ENST00000412052 PDZRN3Q9UPQ7 1066 aa18.28■□□□□ 0.52
ATRIP-204ENST00000412052 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
ATRIP-204ENST00000412052 SLKQ9H2G2 1235 aaPredicted RBP18.28■□□□□ 0.52
ATRIP-204ENST00000412052 GLI2P10070 1586 aa18.28■□□□□ 0.52
ATRIP-204ENST00000412052 POGZQ7Z3K3 1410 aa18.27■□□□□ 0.51
ATRIP-204ENST00000412052 U2SURPO15042 1029 aaKnown RBP18.26■□□□□ 0.51
ATRIP-204ENST00000412052 CFAP53Q96M91 514 aa18.26■□□□□ 0.51
ATRIP-204ENST00000412052 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
ATRIP-204ENST00000412052 ABCC3O15438 1527 aa18.25■□□□□ 0.51
ATRIP-204ENST00000412052 CD109Q6YHK3 1445 aa18.25■□□□□ 0.51
ATRIP-204ENST00000412052 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
ATRIP-204ENST00000412052 WDR63Q8IWG1 891 aa18.25■□□□□ 0.51
ATRIP-204ENST00000412052 NINLQ9Y2I6 1382 aa18.25■□□□□ 0.51
ATRIP-204ENST00000412052 EVC2Q86UK5 1308 aa18.25■□□□□ 0.51
ATRIP-204ENST00000412052 ANKRD36BQ8N2N9 1353 aa18.24■□□□□ 0.51
ATRIP-204ENST00000412052 ARHGEF28Q8N1W1 1705 aaKnown RBP18.23■□□□□ 0.51
ATRIP-204ENST00000412052 A0A1W2PP64 1363 aa18.23■□□□□ 0.51
ATRIP-204ENST00000412052 HECW2Q9P2P5 1572 aa18.23■□□□□ 0.51
ATRIP-204ENST00000412052 SRPK2P78362 688 aaKnown RBP18.22■□□□□ 0.51
ATRIP-204ENST00000412052 CAMSAP1Q5T5Y3 1602 aa18.22■□□□□ 0.51
ATRIP-204ENST00000412052 MINK1Q8N4C8 1332 aaPredicted RBP18.22■□□□□ 0.51
ATRIP-204ENST00000412052 EXOSC9Q06265 439 aaKnown RBP18.22■□□□□ 0.51
ATRIP-204ENST00000412052 IDI1Q13907 227 aa18.22■□□□□ 0.51
ATRIP-204ENST00000412052 FBLN1P23142 703 aa18.21■□□□□ 0.51
ATRIP-204ENST00000412052 PMFBP1Q8TBY8 1022 aa18.21■□□□□ 0.51
ATRIP-204ENST00000412052 NPM1P06748 294 aaKnown RBP eCLIP18.21■□□□□ 0.5
ATRIP-204ENST00000412052 SPRYD3Q8NCJ5 442 aa18.21■□□□□ 0.5
ATRIP-204ENST00000412052 NEXMIFQ5QGS0 1516 aa18.2■□□□□ 0.5
ATRIP-204ENST00000412052 MVPQ14764 893 aaKnown RBP18.2■□□□□ 0.5
ATRIP-204ENST00000412052 CCDC27Q2M243 656 aa18.2■□□□□ 0.5
ATRIP-204ENST00000412052 MYH16Q9H6N6 1097 aa18.2■□□□□ 0.5
ATRIP-204ENST00000412052 USP32Q8NFA0 1604 aa18.2■□□□□ 0.5
ATRIP-204ENST00000412052 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
ATRIP-204ENST00000412052 ANO8Q9HCE9 1232 aaPredicted RBP18.19■□□□□ 0.5
ATRIP-204ENST00000412052 SMC4Q9NTJ3 1288 aa18.19■□□□□ 0.5
ATRIP-204ENST00000412052 RPGRIP1LQ68CZ1 1315 aa18.19■□□□□ 0.5
ATRIP-204ENST00000412052 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
ATRIP-204ENST00000412052 TRIM35Q9UPQ4 493 aa18.19■□□□□ 0.5
ATRIP-204ENST00000412052 VGFO15240 615 aaPredicted RBP18.18■□□□□ 0.5
ATRIP-204ENST00000412052 TRIM27P14373 513 aa18.18■□□□□ 0.5
ATRIP-204ENST00000412052 SSH1Q8WYL5 1049 aa18.18■□□□□ 0.5
ATRIP-204ENST00000412052 PLEKHF1Q96S99 279 aa18.18■□□□□ 0.5
ATRIP-204ENST00000412052 POGKQ9P215 609 aa18.18■□□□□ 0.5
ATRIP-204ENST00000412052 TMPOP42166 694 aaKnown RBP18.17■□□□□ 0.5
ATRIP-204ENST00000412052 ZKSCAN2Q63HK3 967 aa18.17■□□□□ 0.5
ATRIP-204ENST00000412052 DZIP1LQ8IYY4 767 aaKnown RBP18.17■□□□□ 0.5
ATRIP-204ENST00000412052 PRAM1Q96QH2 718 aa18.16■□□□□ 0.5
ATRIP-204ENST00000412052 RWDD1Q9H446 243 aaPredicted RBP18.16■□□□□ 0.5
ATRIP-204ENST00000412052 ADGRB2O60241 1585 aa18.15■□□□□ 0.5
ATRIP-204ENST00000412052 FYB1O15117 783 aa18.15■□□□□ 0.5
ATRIP-204ENST00000412052 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
ATRIP-204ENST00000412052 TBC1D32Q96NH3 1257 aa18.15■□□□□ 0.5
ATRIP-204ENST00000412052 TBC1D2Q9BYX2 928 aa18.14■□□□□ 0.5
ATRIP-204ENST00000412052 ABCC11Q96J66 1382 aa18.14■□□□□ 0.5
ATRIP-204ENST00000412052 MYO5BQ9ULV0 1848 aa18.14■□□□□ 0.49
ATRIP-204ENST00000412052 NOB1Q9ULX3 412 aaKnown RBP18.14■□□□□ 0.49
ATRIP-204ENST00000412052 PIK3C2BO00750 1634 aa18.13■□□□□ 0.49
ATRIP-204ENST00000412052 COL3A1P02461 1466 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms