RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 SIRT1Q96EB6 747 aa14.39□□□□□ -0.11
TTC39A-207ENST00000411642 TIMELESSQ9UNS1 1208 aa14.39□□□□□ -0.11
TTC39A-207ENST00000411642 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
TTC39A-207ENST00000411642 FMN2Q9NZ56 1722 aa14.38□□□□□ -0.11
TTC39A-207ENST00000411642 ATF3P18847 181 aa14.38□□□□□ -0.11
TTC39A-207ENST00000411642 PIP4K2BP78356 416 aa14.38□□□□□ -0.11
TTC39A-207ENST00000411642 CADPS2Q86UW7 1296 aa14.38□□□□□ -0.11
TTC39A-207ENST00000411642 PRAM1Q96QH2 718 aa14.38□□□□□ -0.11
TTC39A-207ENST00000411642 QRICH2Q9H0J4 1663 aa14.38□□□□□ -0.11
TTC39A-207ENST00000411642 SAFB2Q14151 953 aaKnown RBP eCLIP14.37□□□□□ -0.11
TTC39A-207ENST00000411642 ILDR1Q86SU0 546 aaPredicted RBP14.37□□□□□ -0.11
TTC39A-207ENST00000411642 POGKQ9P215 609 aa14.37□□□□□ -0.11
TTC39A-207ENST00000411642 ADGRB2O60241 1585 aa14.37□□□□□ -0.11
TTC39A-207ENST00000411642 RGPD8O14715 1765 aaPredicted RBP14.37□□□□□ -0.11
TTC39A-207ENST00000411642 GPRASP1Q5JY77 1395 aa14.36□□□□□ -0.11
TTC39A-207ENST00000411642 MST1RQ04912 1400 aa14.35□□□□□ -0.11
TTC39A-207ENST00000411642 SLAIN2Q9P270 581 aa14.34□□□□□ -0.11
TTC39A-207ENST00000411642 CARD11Q9BXL7 1154 aa14.33□□□□□ -0.12
TTC39A-207ENST00000411642 MINK1Q8N4C8 1332 aaPredicted RBP14.32□□□□□ -0.12
TTC39A-207ENST00000411642 EIF3AQ14152 1382 aaKnown RBP14.32□□□□□ -0.12
TTC39A-207ENST00000411642 HIRIP3Q9BW71 556 aaPredicted RBP14.31□□□□□ -0.12
TTC39A-207ENST00000411642 PHLPP1O60346 1717 aa14.31□□□□□ -0.12
TTC39A-207ENST00000411642 CENPJQ9HC77 1338 aaPredicted RBP14.31□□□□□ -0.12
TTC39A-207ENST00000411642 C1orf167Q5SNV9 1468 aa14.31□□□□□ -0.12
TTC39A-207ENST00000411642 USP32Q8NFA0 1604 aa14.3□□□□□ -0.12
TTC39A-207ENST00000411642 NHSL1Q5SYE7 1610 aa14.3□□□□□ -0.12
TTC39A-207ENST00000411642 ITSN1Q15811 1721 aa14.29□□□□□ -0.12
TTC39A-207ENST00000411642 NUTM2FA1L443 756 aa14.28□□□□□ -0.12
TTC39A-207ENST00000411642 KIF1AQ12756 1690 aa14.28□□□□□ -0.12
TTC39A-207ENST00000411642 TULP4Q9NRJ4 1543 aa14.28□□□□□ -0.12
TTC39A-207ENST00000411642 AHDC1Q5TGY3 1603 aaPredicted RBP14.27□□□□□ -0.12
TTC39A-207ENST00000411642 BRINP3Q76B58 766 aa14.27□□□□□ -0.13
TTC39A-207ENST00000411642 HSPA1LP34931 641 aa14.26□□□□□ -0.13
TTC39A-207ENST00000411642 TOPAZ1Q8N9V7 1692 aa14.26□□□□□ -0.13
TTC39A-207ENST00000411642 ANKARQ7Z5J8 1434 aa14.25□□□□□ -0.13
TTC39A-207ENST00000411642 WASLO00401 505 aaPredicted RBP14.25□□□□□ -0.13
TTC39A-207ENST00000411642 ORAI2Q96SN7 254 aa14.25□□□□□ -0.13
TTC39A-207ENST00000411642 COL16A1Q07092 1604 aaPredicted RBP14.25□□□□□ -0.13
TTC39A-207ENST00000411642 ESCO1Q5FWF5 840 aa14.24□□□□□ -0.13
TTC39A-207ENST00000411642 ATP7BP35670 1465 aa14.24□□□□□ -0.13
TTC39A-207ENST00000411642 USP47Q96K76 1375 aa14.23□□□□□ -0.13
TTC39A-207ENST00000411642 SBNO2Q9Y2G9 1366 aa14.22□□□□□ -0.13
TTC39A-207ENST00000411642 CDK19Q9BWU1 502 aa14.22□□□□□ -0.13
TTC39A-207ENST00000411642 PRR36Q9H6K5 1346 aa14.21□□□□□ -0.13
TTC39A-207ENST00000411642 EVC2Q86UK5 1308 aa14.2□□□□□ -0.14
TTC39A-207ENST00000411642 ST20-MTHFSA0A0A6YYL1 179 aa14.2□□□□□ -0.14
TTC39A-207ENST00000411642 SRPK2P78362 688 aaKnown RBP14.2□□□□□ -0.14
TTC39A-207ENST00000411642 DDX17Q92841 729 aaKnown RBP14.2□□□□□ -0.14
TTC39A-207ENST00000411642 PHF8Q9UPP1 1060 aa14.19□□□□□ -0.14
TTC39A-207ENST00000411642 SHPRHQ149N8 1683 aa14.19□□□□□ -0.14
TTC39A-207ENST00000411642 NPHP3Q7Z494 1330 aa14.18□□□□□ -0.14
TTC39A-207ENST00000411642 NUDT16Q96DE0 195 aaKnown RBP14.18□□□□□ -0.14
TTC39A-207ENST00000411642 CABP2Q9NPB3 220 aa14.18□□□□□ -0.14
TTC39A-207ENST00000411642 PXDNQ92626 1479 aa14.18□□□□□ -0.14
TTC39A-207ENST00000411642 FOXO3O43524 673 aa14.17□□□□□ -0.14
TTC39A-207ENST00000411642 PMFBP1Q8TBY8 1022 aa14.17□□□□□ -0.14
TTC39A-207ENST00000411642 TRPM3Q9HCF6 1732 aaPredicted RBP14.16□□□□□ -0.14
TTC39A-207ENST00000411642 TESK2Q96S53 571 aa14.16□□□□□ -0.14
TTC39A-207ENST00000411642 SOS2Q07890 1332 aaPredicted RBP14.15□□□□□ -0.14
TTC39A-207ENST00000411642 PPIP5K1Q6PFW1 1433 aa14.15□□□□□ -0.14
TTC39A-207ENST00000411642 AKAP12Q02952 1782 aa14.15□□□□□ -0.14
TTC39A-207ENST00000411642 XPCQ01831 940 aaPredicted RBP14.15□□□□□ -0.14
TTC39A-207ENST00000411642 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
TTC39A-207ENST00000411642 ATAD2Q6PL18 1390 aa14.14□□□□□ -0.15
TTC39A-207ENST00000411642 JCADQ9P266 1359 aa14.14□□□□□ -0.15
TTC39A-207ENST00000411642 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
TTC39A-207ENST00000411642 SLC24A1O60721 1099 aa14.13□□□□□ -0.15
TTC39A-207ENST00000411642 NGDNQ8NEJ9 315 aaKnown RBP14.13□□□□□ -0.15
TTC39A-207ENST00000411642 DISP3Q9P2K9 1392 aa14.12□□□□□ -0.15
TTC39A-207ENST00000411642 ALS2Q96Q42 1657 aa14.12□□□□□ -0.15
TTC39A-207ENST00000411642 HSPA5P11021 654 aaKnown RBP14.12□□□□□ -0.15
TTC39A-207ENST00000411642 PSME1Q06323 249 aa14.12□□□□□ -0.15
TTC39A-207ENST00000411642 LRRC59Q96AG4 307 aaKnown RBP14.12□□□□□ -0.15
TTC39A-207ENST00000411642 COL22A1Q8NFW1 1626 aaPredicted RBP14.12□□□□□ -0.15
TTC39A-207ENST00000411642 POLR3AO14802 1390 aaPredicted RBP14.11□□□□□ -0.15
TTC39A-207ENST00000411642 PLEKHG3A1L390 1219 aa14.11□□□□□ -0.15
TTC39A-207ENST00000411642 TMF1P82094 1093 aa14.11□□□□□ -0.15
TTC39A-207ENST00000411642 MON2Q7Z3U7 1717 aa14.11□□□□□ -0.15
TTC39A-207ENST00000411642 KRT28Q7Z3Y7 464 aa14.11□□□□□ -0.15
TTC39A-207ENST00000411642 ACEP12821 1306 aa14.11□□□□□ -0.15
TTC39A-207ENST00000411642 PNPLA6Q8IY17 1366 aa14.1□□□□□ -0.15
TTC39A-207ENST00000411642 MED1Q15648 1581 aaPredicted RBP14.1□□□□□ -0.15
TTC39A-207ENST00000411642 CABP1Q9NZU7 370 aa14.1□□□□□ -0.15
TTC39A-207ENST00000411642 MYOM1P52179 1685 aa14.1□□□□□ -0.15
TTC39A-207ENST00000411642 ABCA3Q99758 1704 aa14.1□□□□□ -0.15
TTC39A-207ENST00000411642 TNS3Q68CZ2 1445 aa14.09□□□□□ -0.15
TTC39A-207ENST00000411642 SBNO1A3KN83 1393 aa14.09□□□□□ -0.15
TTC39A-207ENST00000411642 PUS7Q96PZ0 661 aaKnown RBP14.08□□□□□ -0.16
TTC39A-207ENST00000411642 SPATA31A3Q5VYP0 1347 aa14.08□□□□□ -0.16
TTC39A-207ENST00000411642 NRKQ7Z2Y5 1582 aa14.08□□□□□ -0.16
TTC39A-207ENST00000411642 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
TTC39A-207ENST00000411642 TMC1Q8TDI8 760 aa14.07□□□□□ -0.16
TTC39A-207ENST00000411642 SPATA31A6Q5VVP1 1343 aa14.07□□□□□ -0.16
TTC39A-207ENST00000411642 CRYBG1Q9Y4K1 1723 aa14.07□□□□□ -0.16
TTC39A-207ENST00000411642 USP6P35125 1406 aa14.07□□□□□ -0.16
TTC39A-207ENST00000411642 LRP6O75581 1613 aa14.06□□□□□ -0.16
TTC39A-207ENST00000411642 CDCA8Q53HL2 280 aa14.06□□□□□ -0.16
TTC39A-207ENST00000411642 ARHGEF10O15013 1369 aa14.06□□□□□ -0.16
TTC39A-207ENST00000411642 CD163L1Q9NR16 1453 aa14.06□□□□□ -0.16
TTC39A-207ENST00000411642 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms