RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 RALGAPBQ86X10 1494 aa13.46□□□□□ -0.25
RN7SKP3-201ENST00000411409 ROCK2O75116 1388 aaKnown RBP13.45□□□□□ -0.26
RN7SKP3-201ENST00000411409 XRN1Q8IZH2 1706 aaKnown RBP13.44□□□□□ -0.26
RN7SKP3-201ENST00000411409 KNDC1Q76NI1 1749 aa13.44□□□□□ -0.26
RN7SKP3-201ENST00000411409 EIF3AQ14152 1382 aaKnown RBP13.44□□□□□ -0.26
RN7SKP3-201ENST00000411409 TRPM1Q7Z4N2 1603 aa13.43□□□□□ -0.26
RN7SKP3-201ENST00000411409 NBPF8Q3BBV2 869 aa13.43□□□□□ -0.26
RN7SKP3-201ENST00000411409 PTPRUQ92729 1446 aa13.43□□□□□ -0.26
RN7SKP3-201ENST00000411409 PROSER2Q86WR7 435 aaPredicted RBP13.42□□□□□ -0.26
RN7SKP3-201ENST00000411409 ASXL1Q8IXJ9 1541 aa13.41□□□□□ -0.26
RN7SKP3-201ENST00000411409 TMEM132EQ6IEE7 984 aa13.41□□□□□ -0.26
RN7SKP3-201ENST00000411409 DCCP43146 1447 aa13.4□□□□□ -0.26
RN7SKP3-201ENST00000411409 LRRC7Q96NW7 1537 aa13.4□□□□□ -0.26
RN7SKP3-201ENST00000411409 CARD11Q9BXL7 1154 aa13.4□□□□□ -0.26
RN7SKP3-201ENST00000411409 C19orf44Q9H6X5 657 aa13.4□□□□□ -0.26
RN7SKP3-201ENST00000411409 NBPF1Q3BBV0 1214 aa13.39□□□□□ -0.27
RN7SKP3-201ENST00000411409 TMEM94Q12767 1356 aa13.38□□□□□ -0.27
RN7SKP3-201ENST00000411409 ROBO2Q9HCK4 1378 aa13.38□□□□□ -0.27
RN7SKP3-201ENST00000411409 MSH6P52701 1360 aa13.37□□□□□ -0.27
RN7SKP3-201ENST00000411409 SBNO2Q9Y2G9 1366 aa13.37□□□□□ -0.27
RN7SKP3-201ENST00000411409 CADPS2Q86UW7 1296 aa13.37□□□□□ -0.27
RN7SKP3-201ENST00000411409 POGKQ9P215 609 aa13.37□□□□□ -0.27
RN7SKP3-201ENST00000411409 STK26Q9P289 416 aa13.37□□□□□ -0.27
RN7SKP3-201ENST00000411409 STRCP1A6NGW2 1772 aa13.37□□□□□ -0.27
RN7SKP3-201ENST00000411409 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
RN7SKP3-201ENST00000411409 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
RN7SKP3-201ENST00000411409 ADGRL3Q9HAR2 1447 aa13.36□□□□□ -0.27
RN7SKP3-201ENST00000411409 MED1Q15648 1581 aaPredicted RBP13.36□□□□□ -0.27
RN7SKP3-201ENST00000411409 PUS7Q96PZ0 661 aaKnown RBP13.35□□□□□ -0.27
RN7SKP3-201ENST00000411409 PRAM1Q96QH2 718 aa13.35□□□□□ -0.27
RN7SKP3-201ENST00000411409 CENPJQ9HC77 1338 aaPredicted RBP13.35□□□□□ -0.27
RN7SKP3-201ENST00000411409 ATF3P18847 181 aa13.33□□□□□ -0.28
RN7SKP3-201ENST00000411409 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
RN7SKP3-201ENST00000411409 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
RN7SKP3-201ENST00000411409 C14orf37Q86TY3 774 aa13.32□□□□□ -0.28
RN7SKP3-201ENST00000411409 ARHGEF28Q8N1W1 1705 aaKnown RBP13.32□□□□□ -0.28
RN7SKP3-201ENST00000411409 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
RN7SKP3-201ENST00000411409 EIF4G2P78344 907 aaKnown RBP eCLIP13.31□□□□□ -0.28
RN7SKP3-201ENST00000411409 WAPLQ7Z5K2 1190 aa13.31□□□□□ -0.28
RN7SKP3-201ENST00000411409 USP47Q96K76 1375 aa13.31□□□□□ -0.28
RN7SKP3-201ENST00000411409 CDCA8Q53HL2 280 aa13.3□□□□□ -0.28
RN7SKP3-201ENST00000411409 EVC2Q86UK5 1308 aa13.29□□□□□ -0.28
RN7SKP3-201ENST00000411409 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
RN7SKP3-201ENST00000411409 ANKARQ7Z5J8 1434 aa13.29□□□□□ -0.28
RN7SKP3-201ENST00000411409 WASLO00401 505 aaPredicted RBP13.28□□□□□ -0.28
RN7SKP3-201ENST00000411409 PLEKHH1Q9ULM0 1364 aa13.28□□□□□ -0.28
RN7SKP3-201ENST00000411409 SLAIN2Q9P270 581 aa13.27□□□□□ -0.29
RN7SKP3-201ENST00000411409 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.27□□□□□ -0.29
RN7SKP3-201ENST00000411409 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
RN7SKP3-201ENST00000411409 TMF1P82094 1093 aa13.26□□□□□ -0.29
RN7SKP3-201ENST00000411409 NALCNQ8IZF0 1738 aa13.25□□□□□ -0.29
RN7SKP3-201ENST00000411409 TESK2Q96S53 571 aa13.25□□□□□ -0.29
RN7SKP3-201ENST00000411409 MST1RQ04912 1400 aa13.24□□□□□ -0.29
RN7SKP3-201ENST00000411409 ATAD2Q6PL18 1390 aa13.24□□□□□ -0.29
RN7SKP3-201ENST00000411409 NINLQ9Y2I6 1382 aa13.24□□□□□ -0.29
RN7SKP3-201ENST00000411409 QRICH2Q9H0J4 1663 aa13.24□□□□□ -0.29
RN7SKP3-201ENST00000411409 TULP4Q9NRJ4 1543 aa13.23□□□□□ -0.29
RN7SKP3-201ENST00000411409 MINK1Q8N4C8 1332 aaPredicted RBP13.23□□□□□ -0.29
RN7SKP3-201ENST00000411409 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
RN7SKP3-201ENST00000411409 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
RN7SKP3-201ENST00000411409 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
RN7SKP3-201ENST00000411409 SAFB2Q14151 953 aaKnown RBP eCLIP13.22□□□□□ -0.29
RN7SKP3-201ENST00000411409 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
RN7SKP3-201ENST00000411409 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
RN7SKP3-201ENST00000411409 BRD4O60885 1362 aaPredicted RBP13.2□□□□□ -0.3
RN7SKP3-201ENST00000411409 PLEKHG3A1L390 1219 aa13.2□□□□□ -0.3
RN7SKP3-201ENST00000411409 HSPA5P11021 654 aaKnown RBP13.2□□□□□ -0.3
RN7SKP3-201ENST00000411409 SRPK2P78362 688 aaKnown RBP13.2□□□□□ -0.3
RN7SKP3-201ENST00000411409 NUDT16Q96DE0 195 aaKnown RBP13.19□□□□□ -0.3
RN7SKP3-201ENST00000411409 HIRIP3Q9BW71 556 aaPredicted RBP13.19□□□□□ -0.3
RN7SKP3-201ENST00000411409 KIF1AQ12756 1690 aa13.18□□□□□ -0.3
RN7SKP3-201ENST00000411409 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
RN7SKP3-201ENST00000411409 ATP7BP35670 1465 aa13.17□□□□□ -0.3
RN7SKP3-201ENST00000411409 NPHP3Q7Z494 1330 aa13.17□□□□□ -0.3
RN7SKP3-201ENST00000411409 ITSN1Q15811 1721 aa13.17□□□□□ -0.3
RN7SKP3-201ENST00000411409 ESCO1Q5FWF5 840 aa13.17□□□□□ -0.3
RN7SKP3-201ENST00000411409 BRINP3Q76B58 766 aa13.17□□□□□ -0.3
RN7SKP3-201ENST00000411409 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
RN7SKP3-201ENST00000411409 RGS17Q9UGC6 210 aaPredicted RBP13.16□□□□□ -0.3
RN7SKP3-201ENST00000411409 POLR3AO14802 1390 aaPredicted RBP13.16□□□□□ -0.3
RN7SKP3-201ENST00000411409 PSME1Q06323 249 aa13.15□□□□□ -0.3
RN7SKP3-201ENST00000411409 CABP2Q9NPB3 220 aa13.15□□□□□ -0.3
RN7SKP3-201ENST00000411409 PRR36Q9H6K5 1346 aa13.14□□□□□ -0.31
RN7SKP3-201ENST00000411409 AHDC1Q5TGY3 1603 aaPredicted RBP13.14□□□□□ -0.31
RN7SKP3-201ENST00000411409 TERF2IPQ9NYB0 399 aa13.14□□□□□ -0.31
RN7SKP3-201ENST00000411409 ROBO1Q9Y6N7 1651 aa13.14□□□□□ -0.31
RN7SKP3-201ENST00000411409 PPIP5K1Q6PFW1 1433 aa13.13□□□□□ -0.31
RN7SKP3-201ENST00000411409 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
RN7SKP3-201ENST00000411409 TOPAZ1Q8N9V7 1692 aa13.13□□□□□ -0.31
RN7SKP3-201ENST00000411409 ORAI2Q96SN7 254 aa13.13□□□□□ -0.31
RN7SKP3-201ENST00000411409 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
RN7SKP3-201ENST00000411409 SBNO1A3KN83 1393 aa13.12□□□□□ -0.31
RN7SKP3-201ENST00000411409 NGDNQ8NEJ9 315 aaKnown RBP13.12□□□□□ -0.31
RN7SKP3-201ENST00000411409 LRRC59Q96AG4 307 aaKnown RBP13.12□□□□□ -0.31
RN7SKP3-201ENST00000411409 NHSL1Q5SYE7 1610 aa13.11□□□□□ -0.31
RN7SKP3-201ENST00000411409 POTEAQ6S8J7 498 aa13.11□□□□□ -0.31
RN7SKP3-201ENST00000411409 HDGFL2Q7Z4V5 671 aaPredicted RBP13.11□□□□□ -0.31
RN7SKP3-201ENST00000411409 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
RN7SKP3-201ENST00000411409 JCADQ9P266 1359 aa13.1□□□□□ -0.31
RN7SKP3-201ENST00000411409 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms