RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 TRIM32Q13049 653 aa7.89□□□□□ -1.15
RNU4-61P-201ENST00000411243 PUS10Q3MIT2 529 aaKnown RBP7.89□□□□□ -1.15
RNU4-61P-201ENST00000411243 THAP11Q96EK4 314 aa7.88□□□□□ -1.15
RNU4-61P-201ENST00000411243 ADAMTS8Q9UP79 889 aa7.88□□□□□ -1.15
RNU4-61P-201ENST00000411243 FAM160A2Q8N612 972 aaPredicted RBP7.86□□□□□ -1.15
RNU4-61P-201ENST00000411243 PRDM9Q9NQV7 894 aa7.86□□□□□ -1.15
RNU4-61P-201ENST00000411243 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
RNU4-61P-201ENST00000411243 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
RNU4-61P-201ENST00000411243 RCCD1A6NED2 376 aa7.82□□□□□ -1.16
RNU4-61P-201ENST00000411243 CAPN5O15484 640 aaPredicted RBP7.81□□□□□ -1.16
RNU4-61P-201ENST00000411243 ZFP42Q96MM3 310 aa7.81□□□□□ -1.16
RNU4-61P-201ENST00000411243 IRS1P35568 1242 aa7.8□□□□□ -1.16
RNU4-61P-201ENST00000411243 MORN1Q5T089 497 aa7.8□□□□□ -1.16
RNU4-61P-201ENST00000411243 FMNL1O95466 1100 aaPredicted RBP7.79□□□□□ -1.16
RNU4-61P-201ENST00000411243 ADGRG1Q9Y653 693 aa7.79□□□□□ -1.16
RNU4-61P-201ENST00000411243 ALDH1A1P00352 501 aa7.78□□□□□ -1.16
RNU4-61P-201ENST00000411243 MSS51Q4VC12 460 aa7.78□□□□□ -1.16
RNU4-61P-201ENST00000411243 RC3H1Q5TC82 1133 aaKnown RBP7.78□□□□□ -1.16
RNU4-61P-201ENST00000411243 KANK3Q6NY19 840 aa7.78□□□□□ -1.16
RNU4-61P-201ENST00000411243 Q8N3U1 123 aa7.78□□□□□ -1.16
RNU4-61P-201ENST00000411243 ARIH1Q9Y4X5 557 aaPredicted RBP7.77□□□□□ -1.17
RNU4-61P-201ENST00000411243 KRTAP4-12Q9BQ66 201 aa7.76□□□□□ -1.17
RNU4-61P-201ENST00000411243 SALL2Q9Y467 1007 aaPredicted RBP7.76□□□□□ -1.17
RNU4-61P-201ENST00000411243 KRT76Q01546 638 aa7.75□□□□□ -1.17
RNU4-61P-201ENST00000411243 WNT7BP56706 349 aa7.74□□□□□ -1.17
RNU4-61P-201ENST00000411243 SKOR1P84550 965 aa7.74□□□□□ -1.17
RNU4-61P-201ENST00000411243 ZNF385CQ66K41 422 aaPredicted RBP7.73□□□□□ -1.17
RNU4-61P-201ENST00000411243 BRICD5Q6PL45 260 aa7.73□□□□□ -1.17
RNU4-61P-201ENST00000411243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.72□□□□□ -1.17
RNU4-61P-201ENST00000411243 MSTNO14793 375 aa7.72□□□□□ -1.17
RNU4-61P-201ENST00000411243 KRTAP9-9Q9BYP9 154 aa7.72□□□□□ -1.17
RNU4-61P-201ENST00000411243 KRTAP9-4Q9BYQ2 154 aa7.72□□□□□ -1.17
RNU4-61P-201ENST00000411243 SLC27A5Q9Y2P5 690 aa7.72□□□□□ -1.17
RNU4-61P-201ENST00000411243 SOBPA7XYQ1 873 aa7.71□□□□□ -1.18
RNU4-61P-201ENST00000411243 KRTAP4-8A0A0G2JLE6 195 aa7.7□□□□□ -1.18
RNU4-61P-201ENST00000411243 FECHP22830 423 aa7.7□□□□□ -1.18
RNU4-61P-201ENST00000411243 MMP16P51512 607 aa7.7□□□□□ -1.18
RNU4-61P-201ENST00000411243 SPOCK3Q9BQ16 436 aa7.7□□□□□ -1.18
RNU4-61P-201ENST00000411243 SIAH2O43255 324 aa7.69□□□□□ -1.18
RNU4-61P-201ENST00000411243 PPFIA3O75145 1194 aa7.69□□□□□ -1.18
RNU4-61P-201ENST00000411243 FUT2Q10981 343 aa7.69□□□□□ -1.18
RNU4-61P-201ENST00000411243 RSPH4AQ5TD94 716 aa7.69□□□□□ -1.18
RNU4-61P-201ENST00000411243 SVOPQ8N4V2 548 aa7.69□□□□□ -1.18
RNU4-61P-201ENST00000411243 ARHGEF15O94989 841 aa7.68□□□□□ -1.18
RNU4-61P-201ENST00000411243 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
RNU4-61P-201ENST00000411243 MRPL14Q6P1L8 145 aaKnown RBP7.68□□□□□ -1.18
RNU4-61P-201ENST00000411243 CNTNAP3BQ96NU0 1288 aa7.68□□□□□ -1.18
RNU4-61P-201ENST00000411243 CNTNAP3Q9BZ76 1288 aa7.68□□□□□ -1.18
RNU4-61P-201ENST00000411243 WASF2Q9Y6W5 498 aa7.68□□□□□ -1.18
RNU4-61P-201ENST00000411243 FAM161AQ3B820 660 aa7.67□□□□□ -1.18
RNU4-61P-201ENST00000411243 PLA2G4EQ3MJ16 856 aa7.67□□□□□ -1.18
RNU4-61P-201ENST00000411243 BTBD11A6QL63 1104 aa7.66□□□□□ -1.18
RNU4-61P-201ENST00000411243 SCARF1Q14162 830 aa7.66□□□□□ -1.18
RNU4-61P-201ENST00000411243 RNF19BQ6ZMZ0 732 aa7.66□□□□□ -1.18
RNU4-61P-201ENST00000411243 PURBQ96QR8 312 aaKnown RBP7.66□□□□□ -1.18
RNU4-61P-201ENST00000411243 K7ELQ4 463 aaPredicted RBP7.65□□□□□ -1.18
RNU4-61P-201ENST00000411243 PTGDRQ13258 359 aa7.65□□□□□ -1.18
RNU4-61P-201ENST00000411243 SCARF2Q96GP6 870 aaPredicted RBP7.65□□□□□ -1.18
RNU4-61P-201ENST00000411243 PROCP04070 461 aa7.64□□□□□ -1.19
RNU4-61P-201ENST00000411243 ITGB2P05107 769 aa7.64□□□□□ -1.19
RNU4-61P-201ENST00000411243 MARSP56192 900 aaKnown RBP7.64□□□□□ -1.19
RNU4-61P-201ENST00000411243 GPR161Q8N6U8 529 aaKnown RBP7.64□□□□□ -1.19
RNU4-61P-201ENST00000411243 DXOO77932 396 aaKnown RBP7.62□□□□□ -1.19
RNU4-61P-201ENST00000411243 E2F4Q16254 413 aa7.62□□□□□ -1.19
RNU4-61P-201ENST00000411243 WHAMMQ8TF30 809 aa7.62□□□□□ -1.19
RNU4-61P-201ENST00000411243 SLURP2P0DP57 97 aa7.6□□□□□ -1.19
RNU4-61P-201ENST00000411243 EHBP1Q8NDI1 1231 aa7.6□□□□□ -1.19
RNU4-61P-201ENST00000411243 PXYLP1Q8TE99 480 aa7.6□□□□□ -1.19
RNU4-61P-201ENST00000411243 MAN1A2O60476 641 aa7.59□□□□□ -1.19
RNU4-61P-201ENST00000411243 COL25A1Q9BXS0 654 aaPredicted RBP7.59□□□□□ -1.19
RNU4-61P-201ENST00000411243 RNFT1Q5M7Z0 435 aa7.57□□□□□ -1.2
RNU4-61P-201ENST00000411243 RDH13Q8NBN7 331 aa7.57□□□□□ -1.2
RNU4-61P-201ENST00000411243 GALNT6Q8NCL4 622 aa7.57□□□□□ -1.2
RNU4-61P-201ENST00000411243 DCAF5Q96JK2 942 aa7.57□□□□□ -1.2
RNU4-61P-201ENST00000411243 TIMP2P16035 220 aa7.56□□□□□ -1.2
RNU4-61P-201ENST00000411243 CCDC24Q8N4L8 307 aa7.55□□□□□ -1.2
RNU4-61P-201ENST00000411243 GCGRP47871 477 aa7.54□□□□□ -1.2
RNU4-61P-201ENST00000411243 Q3C1V9 767 aa7.54□□□□□ -1.2
RNU4-61P-201ENST00000411243 ADH1CP00326 375 aa7.53□□□□□ -1.2
RNU4-61P-201ENST00000411243 OATP04181 439 aa7.53□□□□□ -1.2
RNU4-61P-201ENST00000411243 NNTQ13423 1086 aa7.53□□□□□ -1.2
RNU4-61P-201ENST00000411243 NANOS1Q8WY41 292 aaKnown RBP7.51□□□□□ -1.21
RNU4-61P-201ENST00000411243 USB1Q9BQ65 265 aaKnown RBP7.51□□□□□ -1.21
RNU4-61P-201ENST00000411243 TLL2Q9Y6L7 1015 aa7.51□□□□□ -1.21
RNU4-61P-201ENST00000411243 WDR4P57081 412 aaKnown RBP7.5□□□□□ -1.21
RNU4-61P-201ENST00000411243 METTL3Q86U44 580 aaKnown RBP7.5□□□□□ -1.21
RNU4-61P-201ENST00000411243 KLF16Q9BXK1 252 aaPredicted RBP7.5□□□□□ -1.21
RNU4-61P-201ENST00000411243 DAXXQ9UER7 740 aaPredicted RBP7.49□□□□□ -1.21
RNU4-61P-201ENST00000411243 DDX11L8A8MPP1 907 aa7.48□□□□□ -1.21
RNU4-61P-201ENST00000411243 GRIPAP1Q4V328 841 aa7.48□□□□□ -1.21
RNU4-61P-201ENST00000411243 KRTAP19-1Q8IUB9 90 aa7.48□□□□□ -1.21
RNU4-61P-201ENST00000411243 PHF20L1A8MW92 1017 aa7.47□□□□□ -1.21
RNU4-61P-201ENST00000411243 BAG6P46379 1132 aa7.47□□□□□ -1.21
RNU4-61P-201ENST00000411243 C6orf118Q5T5N4 469 aa7.47□□□□□ -1.21
RNU4-61P-201ENST00000411243 DNMT3LQ9UJW3 386 aa7.47□□□□□ -1.21
RNU4-61P-201ENST00000411243 SH3BP2P78314 561 aa7.46□□□□□ -1.22
RNU4-61P-201ENST00000411243 MPNDQ8N594 471 aa7.46□□□□□ -1.22
RNU4-61P-201ENST00000411243 PLEKHG3A1L390 1219 aa7.45□□□□□ -1.22
RNU4-61P-201ENST00000411243 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
RNU4-61P-201ENST00000411243 MAP3K10Q02779 954 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms