RNA–Protein interactions for RNA: ENST00000410513.1

RN7SKP56-201, Transcript of RNA, 7SK small nuclear pseudogene 56, humanhuman

BASIC

Gene RN7SKP56, Length 331 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP56-201ENST00000410513 Q3C1V9 767 aa8.66□□□□□ -1.02
RN7SKP56-201ENST00000410513 LIMD1Q9UGP4 676 aa8.66□□□□□ -1.02
RN7SKP56-201ENST00000410513 PCDHB15Q9Y5E8 787 aa8.66□□□□□ -1.02
RN7SKP56-201ENST00000410513 RNF223E7ERA6 249 aa8.65□□□□□ -1.02
RN7SKP56-201ENST00000410513 PPEF1O14829 653 aaPredicted RBP8.65□□□□□ -1.02
RN7SKP56-201ENST00000410513 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
RN7SKP56-201ENST00000410513 DIXDC1Q155Q3 683 aa8.64□□□□□ -1.03
RN7SKP56-201ENST00000410513 RIC3Q7Z5B4 369 aa8.64□□□□□ -1.03
RN7SKP56-201ENST00000410513 DDRGK1Q96HY6 314 aa8.64□□□□□ -1.03
RN7SKP56-201ENST00000410513 GJA5P36382 358 aa8.63□□□□□ -1.03
RN7SKP56-201ENST00000410513 MSS51Q4VC12 460 aa8.63□□□□□ -1.03
RN7SKP56-201ENST00000410513 USB1Q9BQ65 265 aaKnown RBP8.63□□□□□ -1.03
RN7SKP56-201ENST00000410513 POLR3EQ9NVU0 708 aa8.63□□□□□ -1.03
RN7SKP56-201ENST00000410513 EMID1Q96A84 441 aaPredicted RBP8.62□□□□□ -1.03
RN7SKP56-201ENST00000410513 C6orf229H3BNL8 230 aa8.61□□□□□ -1.03
RN7SKP56-201ENST00000410513 QPCTQ16769 361 aa8.61□□□□□ -1.03
RN7SKP56-201ENST00000410513 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
RN7SKP56-201ENST00000410513 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
RN7SKP56-201ENST00000410513 RETREG3Q86VR2 466 aa8.61□□□□□ -1.03
RN7SKP56-201ENST00000410513 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
RN7SKP56-201ENST00000410513 CABLES1Q8TDN4 633 aa8.61□□□□□ -1.03
RN7SKP56-201ENST00000410513 GGCXP38435 758 aa8.6□□□□□ -1.03
RN7SKP56-201ENST00000410513 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
RN7SKP56-201ENST00000410513 MMP16P51512 607 aa8.6□□□□□ -1.03
RN7SKP56-201ENST00000410513 SH3D19Q5HYK7 790 aa8.6□□□□□ -1.03
RN7SKP56-201ENST00000410513 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
RN7SKP56-201ENST00000410513 DXOO77932 396 aaKnown RBP8.59□□□□□ -1.03
RN7SKP56-201ENST00000410513 HRCP23327 699 aa8.59□□□□□ -1.03
RN7SKP56-201ENST00000410513 ANKLE1Q8NAG6 615 aa8.59□□□□□ -1.03
RN7SKP56-201ENST00000410513 PROCA1Q8NCQ7 364 aaPredicted RBP8.59□□□□□ -1.03
RN7SKP56-201ENST00000410513 RSPH6AQ9H0K4 717 aa8.59□□□□□ -1.03
RN7SKP56-201ENST00000410513 MTMR2Q13614 643 aa8.58□□□□□ -1.04
RN7SKP56-201ENST00000410513 SKIV2LQ15477 1246 aaKnown RBP8.58□□□□□ -1.04
RN7SKP56-201ENST00000410513 TUSC1Q2TAM9 212 aa8.58□□□□□ -1.04
RN7SKP56-201ENST00000410513 FCF1Q9Y324 198 aaKnown RBP8.58□□□□□ -1.04
RN7SKP56-201ENST00000410513 CFAP99D6REC4 459 aa8.57□□□□□ -1.04
RN7SKP56-201ENST00000410513 LILRB3O75022 631 aa8.57□□□□□ -1.04
RN7SKP56-201ENST00000410513 PRR7Q8TB68 274 aa8.57□□□□□ -1.04
RN7SKP56-201ENST00000410513 RGS20O76081 388 aa8.56□□□□□ -1.04
RN7SKP56-201ENST00000410513 JUNDP17535 347 aa8.56□□□□□ -1.04
RN7SKP56-201ENST00000410513 RTL5Q5HYW3 569 aaPredicted RBP8.56□□□□□ -1.04
RN7SKP56-201ENST00000410513 PRPF38BQ5VTL8 546 aaKnown RBP8.56□□□□□ -1.04
RN7SKP56-201ENST00000410513 PRKD2Q9BZL6 878 aa8.56□□□□□ -1.04
RN7SKP56-201ENST00000410513 ZBTB3Q9H5J0 574 aa8.56□□□□□ -1.04
RN7SKP56-201ENST00000410513 LIAT1Q6ZQX7 453 aa8.55□□□□□ -1.04
RN7SKP56-201ENST00000410513 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.55□□□□□ -1.04
RN7SKP56-201ENST00000410513 SPDYE5A6NIY4 337 aa8.53□□□□□ -1.04
RN7SKP56-201ENST00000410513 NUTM2BA6NNL0 878 aaPredicted RBP8.52□□□□□ -1.05
RN7SKP56-201ENST00000410513 NUTM2EB1AL46 878 aaPredicted RBP8.52□□□□□ -1.05
RN7SKP56-201ENST00000410513 NUTM2DQ5VT03 806 aaPredicted RBP8.52□□□□□ -1.05
RN7SKP56-201ENST00000410513 NUTM2AQ8IVF1 878 aaPredicted RBP8.52□□□□□ -1.05
RN7SKP56-201ENST00000410513 V9GY48 417 aaPredicted RBP8.52□□□□□ -1.05
RN7SKP56-201ENST00000410513 SLC19A1P41440 591 aa8.51□□□□□ -1.05
RN7SKP56-201ENST00000410513 GOPCQ9HD26 462 aa8.51□□□□□ -1.05
RN7SKP56-201ENST00000410513 PER1O15534 1290 aaPredicted RBP8.5□□□□□ -1.05
RN7SKP56-201ENST00000410513 DESI1Q6ICB0 168 aa8.5□□□□□ -1.05
RN7SKP56-201ENST00000410513 PTCRAQ6ISU1 281 aaPredicted RBP8.49□□□□□ -1.05
RN7SKP56-201ENST00000410513 LYPD8Q6UX82 237 aa8.49□□□□□ -1.05
RN7SKP56-201ENST00000410513 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
RN7SKP56-201ENST00000410513 NUDT12Q9BQG2 462 aa8.49□□□□□ -1.05
RN7SKP56-201ENST00000410513 PTPRNQ16849 979 aa8.48□□□□□ -1.05
RN7SKP56-201ENST00000410513 SPRYD7Q5W111 196 aa8.48□□□□□ -1.05
RN7SKP56-201ENST00000410513 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
RN7SKP56-201ENST00000410513 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
RN7SKP56-201ENST00000410513 CCNYL3P0C7X3 344 aa8.47□□□□□ -1.05
RN7SKP56-201ENST00000410513 TSC1Q92574 1164 aa8.47□□□□□ -1.05
RN7SKP56-201ENST00000410513 ATP1B4Q9UN42 357 aaPredicted RBP8.47□□□□□ -1.05
RN7SKP56-201ENST00000410513 RPIAP49247 311 aa8.46□□□□□ -1.06
RN7SKP56-201ENST00000410513 CTDSPL2Q05D32 466 aa8.45□□□□□ -1.06
RN7SKP56-201ENST00000410513 TRIM67Q6ZTA4 783 aa8.45□□□□□ -1.06
RN7SKP56-201ENST00000410513 EVA1BQ9NVM1 165 aa8.45□□□□□ -1.06
RN7SKP56-201ENST00000410513 MAP10Q9P2G4 905 aa8.45□□□□□ -1.06
RN7SKP56-201ENST00000410513 F12P00748 615 aaPredicted RBP8.44□□□□□ -1.06
RN7SKP56-201ENST00000410513 RFC5P40937 340 aa8.44□□□□□ -1.06
RN7SKP56-201ENST00000410513 TRIM32Q13049 653 aa8.44□□□□□ -1.06
RN7SKP56-201ENST00000410513 ZNF697Q5TEC3 545 aa8.44□□□□□ -1.06
RN7SKP56-201ENST00000410513 ZNF598Q86UK7 904 aaKnown RBP8.44□□□□□ -1.06
RN7SKP56-201ENST00000410513 KCNH2Q12809 1159 aa8.43□□□□□ -1.06
RN7SKP56-201ENST00000410513 HELBQ8NG08 1087 aaPredicted RBP8.43□□□□□ -1.06
RN7SKP56-201ENST00000410513 SKOR1P84550 965 aa8.42□□□□□ -1.06
RN7SKP56-201ENST00000410513 LRRN4Q8WUT4 740 aa8.42□□□□□ -1.06
RN7SKP56-201ENST00000410513 PKD2L1Q9P0L9 805 aa8.42□□□□□ -1.06
RN7SKP56-201ENST00000410513 ZBTB24O43167 697 aaPredicted RBP8.41□□□□□ -1.06
RN7SKP56-201ENST00000410513 AP1G2O75843 785 aa8.41□□□□□ -1.06
RN7SKP56-201ENST00000410513 UNC93B1Q9H1C4 597 aa8.41□□□□□ -1.06
RN7SKP56-201ENST00000410513 GDF9O60383 454 aa8.4□□□□□ -1.06
RN7SKP56-201ENST00000410513 CD2BP2O95400 341 aaKnown RBP8.4□□□□□ -1.06
RN7SKP56-201ENST00000410513 USP17L8P0C7I0 530 aa8.39□□□□□ -1.07
RN7SKP56-201ENST00000410513 CTHP32929 405 aa8.39□□□□□ -1.07
RN7SKP56-201ENST00000410513 HMX1Q9NP08 348 aaPredicted RBP8.39□□□□□ -1.07
RN7SKP56-201ENST00000410513 TNFRSF10AO00220 468 aa8.38□□□□□ -1.07
RN7SKP56-201ENST00000410513 FOXC1Q12948 553 aa8.38□□□□□ -1.07
RN7SKP56-201ENST00000410513 LINC01559Q495D7 138 aa8.38□□□□□ -1.07
RN7SKP56-201ENST00000410513 BAP1Q92560 729 aa8.38□□□□□ -1.07
RN7SKP56-201ENST00000410513 IRX2Q9BZI1 471 aaPredicted RBP8.38□□□□□ -1.07
RN7SKP56-201ENST00000410513 PDZRN3Q9UPQ7 1066 aa8.38□□□□□ -1.07
RN7SKP56-201ENST00000410513 SH3BP2P78314 561 aa8.37□□□□□ -1.07
RN7SKP56-201ENST00000410513 GFRA3O60609 400 aa8.36□□□□□ -1.07
RN7SKP56-201ENST00000410513 EPS8L1Q8TE68 723 aa8.36□□□□□ -1.07
RN7SKP56-201ENST00000410513 WNT7AO00755 349 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms