RNA–Protein interactions for RNA: ENST00000409758.1

AP001341.1-201, humanhuman

TSL 3 BASIC

Gene AP001341.1, Length 763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001341.1-201ENST00000409758 RBM6P78332 1123 aaKnown RBP17.87■□□□□ 0.45
AP001341.1-201ENST00000409758 UPF1Q92900 1129 aaKnown RBP eCLIP17.87■□□□□ 0.45
AP001341.1-201ENST00000409758 FOXO3O43524 673 aa17.86■□□□□ 0.45
AP001341.1-201ENST00000409758 NALCNQ8IZF0 1738 aa17.86■□□□□ 0.45
AP001341.1-201ENST00000409758 LRPPRCP42704 1394 aaKnown RBP17.85■□□□□ 0.45
AP001341.1-201ENST00000409758 XPCQ01831 940 aaPredicted RBP17.85■□□□□ 0.45
AP001341.1-201ENST00000409758 SPATA31E1Q6ZUB1 1445 aa17.85■□□□□ 0.45
AP001341.1-201ENST00000409758 PRAG1Q86YV5 1406 aa17.85■□□□□ 0.45
AP001341.1-201ENST00000409758 USP21Q9UK80 565 aa17.85■□□□□ 0.45
AP001341.1-201ENST00000409758 NHSL1Q5SYE7 1610 aa17.84■□□□□ 0.45
AP001341.1-201ENST00000409758 ABCC11Q96J66 1382 aa17.83■□□□□ 0.45
AP001341.1-201ENST00000409758 TRPC5Q9UL62 973 aaPredicted RBP17.81■□□□□ 0.44
AP001341.1-201ENST00000409758 CDK12Q9NYV4 1490 aaPredicted RBP17.81■□□□□ 0.44
AP001341.1-201ENST00000409758 SETD1AO15047 1707 aaKnown RBP17.81■□□□□ 0.44
AP001341.1-201ENST00000409758 C14orf93Q9H972 538 aaKnown RBP17.8■□□□□ 0.44
AP001341.1-201ENST00000409758 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
AP001341.1-201ENST00000409758 PPLO60437 1756 aa17.79■□□□□ 0.44
AP001341.1-201ENST00000409758 CFAP70Q5T0N1 1121 aa17.79■□□□□ 0.44
AP001341.1-201ENST00000409758 POGKQ9P215 609 aa17.79■□□□□ 0.44
AP001341.1-201ENST00000409758 TECPR2O15040 1411 aa17.79■□□□□ 0.44
AP001341.1-201ENST00000409758 PIK3C2GO75747 1445 aa17.79■□□□□ 0.44
AP001341.1-201ENST00000409758 YTHDC2Q9H6S0 1430 aaKnown RBP17.79■□□□□ 0.44
AP001341.1-201ENST00000409758 PLEKHH1Q9ULM0 1364 aa17.79■□□□□ 0.44
AP001341.1-201ENST00000409758 HAP1P54257 671 aaPredicted RBP17.78■□□□□ 0.44
AP001341.1-201ENST00000409758 SAFB2Q14151 953 aaKnown RBP eCLIP17.78■□□□□ 0.44
AP001341.1-201ENST00000409758 SIRT1Q96EB6 747 aa17.78■□□□□ 0.44
AP001341.1-201ENST00000409758 FNBP4Q8N3X1 1017 aaPredicted RBP17.77■□□□□ 0.44
AP001341.1-201ENST00000409758 RAB3GAP2Q9H2M9 1393 aa17.77■□□□□ 0.43
AP001341.1-201ENST00000409758 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
AP001341.1-201ENST00000409758 PLEKHG5O94827 1062 aa17.76■□□□□ 0.43
AP001341.1-201ENST00000409758 PSME1Q06323 249 aa17.76■□□□□ 0.43
AP001341.1-201ENST00000409758 KRT28Q7Z3Y7 464 aa17.76■□□□□ 0.43
AP001341.1-201ENST00000409758 PRAM1Q96QH2 718 aa17.76■□□□□ 0.43
AP001341.1-201ENST00000409758 LMOD2Q6P5Q4 547 aa17.75■□□□□ 0.43
AP001341.1-201ENST00000409758 RGS12O14924 1447 aa17.74■□□□□ 0.43
AP001341.1-201ENST00000409758 PHF8Q9UPP1 1060 aa17.74■□□□□ 0.43
AP001341.1-201ENST00000409758 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
AP001341.1-201ENST00000409758 ATAD2Q6PL18 1390 aa17.72■□□□□ 0.43
AP001341.1-201ENST00000409758 SPATA31A3Q5VYP0 1347 aa17.72■□□□□ 0.43
AP001341.1-201ENST00000409758 PXDNQ92626 1479 aa17.71■□□□□ 0.43
AP001341.1-201ENST00000409758 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
AP001341.1-201ENST00000409758 LAMC1P11047 1609 aa17.71■□□□□ 0.43
AP001341.1-201ENST00000409758 TRAK1Q9UPV9 953 aa17.7■□□□□ 0.42
AP001341.1-201ENST00000409758 MYOM2P54296 1465 aa17.69■□□□□ 0.42
AP001341.1-201ENST00000409758 PMFBP1Q8TBY8 1022 aa17.68■□□□□ 0.42
AP001341.1-201ENST00000409758 GJD4Q96KN9 370 aaPredicted RBP17.68■□□□□ 0.42
AP001341.1-201ENST00000409758 ATRNO75882 1429 aa17.67■□□□□ 0.42
AP001341.1-201ENST00000409758 HIRIP3Q9BW71 556 aaPredicted RBP17.67■□□□□ 0.42
AP001341.1-201ENST00000409758 UNC5CLQ8IV45 518 aa17.66■□□□□ 0.42
AP001341.1-201ENST00000409758 CABLES1Q8TDN4 633 aa17.66■□□□□ 0.42
AP001341.1-201ENST00000409758 STAC3Q96MF2 364 aa17.66■□□□□ 0.42
AP001341.1-201ENST00000409758 CCDC9Q9Y3X0 531 aaKnown RBP17.66■□□□□ 0.42
AP001341.1-201ENST00000409758 NRXN1Q9ULB1 1477 aa17.66■□□□□ 0.42
AP001341.1-201ENST00000409758 MINK1Q8N4C8 1332 aaPredicted RBP17.66■□□□□ 0.42
AP001341.1-201ENST00000409758 BCL9LQ86UU0 1499 aa17.64■□□□□ 0.41
AP001341.1-201ENST00000409758 COL22A1Q8NFW1 1626 aaPredicted RBP17.64■□□□□ 0.41
AP001341.1-201ENST00000409758 HRCP23327 699 aa17.63■□□□□ 0.41
AP001341.1-201ENST00000409758 IFT172Q9UG01 1749 aa17.63■□□□□ 0.41
AP001341.1-201ENST00000409758 ARHGEF10O15013 1369 aa17.63■□□□□ 0.41
AP001341.1-201ENST00000409758 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
AP001341.1-201ENST00000409758 TNS3Q68CZ2 1445 aa17.63■□□□□ 0.41
AP001341.1-201ENST00000409758 SBNO1A3KN83 1393 aa17.62■□□□□ 0.41
AP001341.1-201ENST00000409758 EIF3AQ14152 1382 aaKnown RBP17.62■□□□□ 0.41
AP001341.1-201ENST00000409758 KNDC1Q76NI1 1749 aa17.61■□□□□ 0.41
AP001341.1-201ENST00000409758 CCDC125Q86Z20 511 aa17.61■□□□□ 0.41
AP001341.1-201ENST00000409758 NGDNQ8NEJ9 315 aaKnown RBP17.61■□□□□ 0.41
AP001341.1-201ENST00000409758 KIF1AQ12756 1690 aa17.6■□□□□ 0.41
AP001341.1-201ENST00000409758 FMN2Q9NZ56 1722 aa17.6■□□□□ 0.41
AP001341.1-201ENST00000409758 ANKARQ7Z5J8 1434 aa17.59■□□□□ 0.41
AP001341.1-201ENST00000409758 A0A0G2JS52 829 aa17.59■□□□□ 0.41
AP001341.1-201ENST00000409758 WASLO00401 505 aaPredicted RBP17.59■□□□□ 0.41
AP001341.1-201ENST00000409758 PAK3O75914 559 aaPredicted RBP17.59■□□□□ 0.41
AP001341.1-201ENST00000409758 MYT1Q01538 1121 aa17.59■□□□□ 0.41
AP001341.1-201ENST00000409758 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
AP001341.1-201ENST00000409758 DLC1Q96QB1 1528 aa17.58■□□□□ 0.41
AP001341.1-201ENST00000409758 VPS72Q15906 364 aa17.57■□□□□ 0.4
AP001341.1-201ENST00000409758 SEPT12Q8IYM1 358 aa17.57■□□□□ 0.4
AP001341.1-201ENST00000409758 SF3B2Q13435 895 aaKnown RBP17.56■□□□□ 0.4
AP001341.1-201ENST00000409758 SLIT2O94813 1529 aa17.56■□□□□ 0.4
AP001341.1-201ENST00000409758 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
AP001341.1-201ENST00000409758 FAM83GA6ND36 823 aa17.55■□□□□ 0.4
AP001341.1-201ENST00000409758 MSH5O43196 834 aa17.54■□□□□ 0.4
AP001341.1-201ENST00000409758 ADGRB1O14514 1584 aa17.53■□□□□ 0.4
AP001341.1-201ENST00000409758 PRR36Q9H6K5 1346 aa17.53■□□□□ 0.4
AP001341.1-201ENST00000409758 BTG4Q9NY30 223 aa17.53■□□□□ 0.4
AP001341.1-201ENST00000409758 NUDT16Q96DE0 195 aaKnown RBP17.52■□□□□ 0.4
AP001341.1-201ENST00000409758 KRT27Q7Z3Y8 459 aa17.51■□□□□ 0.39
AP001341.1-201ENST00000409758 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
AP001341.1-201ENST00000409758 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
AP001341.1-201ENST00000409758 USP32Q8NFA0 1604 aa17.5■□□□□ 0.39
AP001341.1-201ENST00000409758 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
AP001341.1-201ENST00000409758 FAM98CQ17RN3 349 aaKnown RBP17.49■□□□□ 0.39
AP001341.1-201ENST00000409758 TULP4Q9NRJ4 1543 aa17.48■□□□□ 0.39
AP001341.1-201ENST00000409758 ADGRB2O60241 1585 aa17.48■□□□□ 0.39
AP001341.1-201ENST00000409758 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
AP001341.1-201ENST00000409758 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
AP001341.1-201ENST00000409758 SRPK2P78362 688 aaKnown RBP17.46■□□□□ 0.39
AP001341.1-201ENST00000409758 NUTM2GQ5VZR2 741 aa17.46■□□□□ 0.39
AP001341.1-201ENST00000409758 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
AP001341.1-201ENST00000409758 GLI3P10071 1580 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms