RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 CADPS2Q86UW7 1296 aa21.12■□□□□ 0.97
SUMO1-207ENST00000409498 ROCK2O75116 1388 aaKnown RBP21.11■□□□□ 0.97
SUMO1-207ENST00000409498 C14orf37Q86TY3 774 aa21.11■□□□□ 0.97
SUMO1-207ENST00000409498 PRAM1Q96QH2 718 aa21.1■□□□□ 0.97
SUMO1-207ENST00000409498 CDC42BPGQ6DT37 1551 aa21.09■□□□□ 0.97
SUMO1-207ENST00000409498 ATF3P18847 181 aa21.08■□□□□ 0.97
SUMO1-207ENST00000409498 POGKQ9P215 609 aa21.07■□□□□ 0.96
SUMO1-207ENST00000409498 SLAIN2Q9P270 581 aa21.07■□□□□ 0.96
SUMO1-207ENST00000409498 ADGRB2O60241 1585 aa21.06■□□□□ 0.96
SUMO1-207ENST00000409498 MST1RQ04912 1400 aa21.05■□□□□ 0.96
SUMO1-207ENST00000409498 CARD11Q9BXL7 1154 aa21.03■□□□□ 0.96
SUMO1-207ENST00000409498 ILDR1Q86SU0 546 aaPredicted RBP21.01■□□□□ 0.95
SUMO1-207ENST00000409498 CENPJQ9HC77 1338 aaPredicted RBP21.01■□□□□ 0.95
SUMO1-207ENST00000409498 FMN2Q9NZ56 1722 aa21.01■□□□□ 0.95
SUMO1-207ENST00000409498 EIF3AQ14152 1382 aaKnown RBP21■□□□□ 0.95
SUMO1-207ENST00000409498 C1orf167Q5SNV9 1468 aa21■□□□□ 0.95
SUMO1-207ENST00000409498 PIP4K2BP78356 416 aa20.99■□□□□ 0.95
SUMO1-207ENST00000409498 SAFB2Q14151 953 aaKnown RBP eCLIP20.99■□□□□ 0.95
SUMO1-207ENST00000409498 ROBO1Q9Y6N7 1651 aa20.98■□□□□ 0.95
SUMO1-207ENST00000409498 SBNO2Q9Y2G9 1366 aa20.97■□□□□ 0.95
SUMO1-207ENST00000409498 WASLO00401 505 aaPredicted RBP20.97■□□□□ 0.95
SUMO1-207ENST00000409498 MINK1Q8N4C8 1332 aaPredicted RBP20.97■□□□□ 0.95
SUMO1-207ENST00000409498 QRICH2Q9H0J4 1663 aa20.96■□□□□ 0.95
SUMO1-207ENST00000409498 ANKARQ7Z5J8 1434 aa20.95■□□□□ 0.95
SUMO1-207ENST00000409498 BRINP3Q76B58 766 aa20.95■□□□□ 0.94
SUMO1-207ENST00000409498 HIRIP3Q9BW71 556 aaPredicted RBP20.93■□□□□ 0.94
SUMO1-207ENST00000409498 TULP4Q9NRJ4 1543 aa20.93■□□□□ 0.94
SUMO1-207ENST00000409498 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
SUMO1-207ENST00000409498 USP32Q8NFA0 1604 aa20.92■□□□□ 0.94
SUMO1-207ENST00000409498 AHDC1Q5TGY3 1603 aaPredicted RBP20.91■□□□□ 0.94
SUMO1-207ENST00000409498 ORAI2Q96SN7 254 aa20.9■□□□□ 0.94
SUMO1-207ENST00000409498 CDK19Q9BWU1 502 aa20.9■□□□□ 0.94
SUMO1-207ENST00000409498 USP47Q96K76 1375 aa20.89■□□□□ 0.93
SUMO1-207ENST00000409498 SLC24A1O60721 1099 aa20.89■□□□□ 0.93
SUMO1-207ENST00000409498 RGPD8O14715 1765 aaPredicted RBP20.89■□□□□ 0.93
SUMO1-207ENST00000409498 NHSL1Q5SYE7 1610 aa20.89■□□□□ 0.93
SUMO1-207ENST00000409498 PRR36Q9H6K5 1346 aa20.88■□□□□ 0.93
SUMO1-207ENST00000409498 HSPA1LP34931 641 aa20.88■□□□□ 0.93
SUMO1-207ENST00000409498 ATP7BP35670 1465 aa20.88■□□□□ 0.93
SUMO1-207ENST00000409498 EVC2Q86UK5 1308 aa20.87■□□□□ 0.93
SUMO1-207ENST00000409498 ST20-MTHFSA0A0A6YYL1 179 aa20.87■□□□□ 0.93
SUMO1-207ENST00000409498 TESK2Q96S53 571 aa20.87■□□□□ 0.93
SUMO1-207ENST00000409498 KIF1AQ12756 1690 aa20.86■□□□□ 0.93
SUMO1-207ENST00000409498 ESCO1Q5FWF5 840 aa20.86■□□□□ 0.93
SUMO1-207ENST00000409498 NUTM2FA1L443 756 aa20.85■□□□□ 0.93
SUMO1-207ENST00000409498 NUDT16Q96DE0 195 aaKnown RBP20.85■□□□□ 0.93
SUMO1-207ENST00000409498 PUS7Q96PZ0 661 aaKnown RBP20.85■□□□□ 0.93
SUMO1-207ENST00000409498 PHLPP1O60346 1717 aa20.84■□□□□ 0.93
SUMO1-207ENST00000409498 ITSN1Q15811 1721 aa20.84■□□□□ 0.93
SUMO1-207ENST00000409498 TOPAZ1Q8N9V7 1692 aa20.83■□□□□ 0.93
SUMO1-207ENST00000409498 COL16A1Q07092 1604 aaPredicted RBP20.83■□□□□ 0.93
SUMO1-207ENST00000409498 PHF8Q9UPP1 1060 aa20.83■□□□□ 0.93
SUMO1-207ENST00000409498 CCDC61Q9Y6R9 512 aa20.83■□□□□ 0.93
SUMO1-207ENST00000409498 SOS2Q07890 1332 aaPredicted RBP20.82■□□□□ 0.92
SUMO1-207ENST00000409498 NPHP3Q7Z494 1330 aa20.81■□□□□ 0.92
SUMO1-207ENST00000409498 PLEKHG3A1L390 1219 aa20.81■□□□□ 0.92
SUMO1-207ENST00000409498 SRPK2P78362 688 aaKnown RBP20.8■□□□□ 0.92
SUMO1-207ENST00000409498 CABP2Q9NPB3 220 aa20.8■□□□□ 0.92
SUMO1-207ENST00000409498 EIF4G2P78344 907 aaKnown RBP eCLIP20.79■□□□□ 0.92
SUMO1-207ENST00000409498 PXDNQ92626 1479 aa20.79■□□□□ 0.92
SUMO1-207ENST00000409498 ATAD2Q6PL18 1390 aa20.78■□□□□ 0.92
SUMO1-207ENST00000409498 FOXO3O43524 673 aa20.78■□□□□ 0.92
SUMO1-207ENST00000409498 POLR3AO14802 1390 aaPredicted RBP20.77■□□□□ 0.92
SUMO1-207ENST00000409498 DDX17Q92841 729 aaKnown RBP20.77■□□□□ 0.92
SUMO1-207ENST00000409498 LRRC59Q96AG4 307 aaKnown RBP20.76■□□□□ 0.91
SUMO1-207ENST00000409498 TMF1P82094 1093 aa20.75■□□□□ 0.91
SUMO1-207ENST00000409498 PMFBP1Q8TBY8 1022 aa20.75■□□□□ 0.91
SUMO1-207ENST00000409498 PPIP5K1Q6PFW1 1433 aa20.75■□□□□ 0.91
SUMO1-207ENST00000409498 JCADQ9P266 1359 aa20.74■□□□□ 0.91
SUMO1-207ENST00000409498 HSPA5P11021 654 aaKnown RBP20.74■□□□□ 0.91
SUMO1-207ENST00000409498 KRT28Q7Z3Y7 464 aa20.73■□□□□ 0.91
SUMO1-207ENST00000409498 SBNO1A3KN83 1393 aa20.72■□□□□ 0.91
SUMO1-207ENST00000409498 PSME1Q06323 249 aa20.72■□□□□ 0.91
SUMO1-207ENST00000409498 SHPRHQ149N8 1683 aa20.72■□□□□ 0.91
SUMO1-207ENST00000409498 DISP3Q9P2K9 1392 aa20.72■□□□□ 0.91
SUMO1-207ENST00000409498 NGDNQ8NEJ9 315 aaKnown RBP20.71■□□□□ 0.91
SUMO1-207ENST00000409498 CABP1Q9NZU7 370 aa20.71■□□□□ 0.91
SUMO1-207ENST00000409498 ACEP12821 1306 aa20.71■□□□□ 0.91
SUMO1-207ENST00000409498 TRPM3Q9HCF6 1732 aaPredicted RBP20.7■□□□□ 0.9
SUMO1-207ENST00000409498 CDCA8Q53HL2 280 aa20.7■□□□□ 0.9
SUMO1-207ENST00000409498 BRD4O60885 1362 aaPredicted RBP20.7■□□□□ 0.9
SUMO1-207ENST00000409498 ZEB1P37275 1124 aaPredicted RBP20.69■□□□□ 0.9
SUMO1-207ENST00000409498 SPATA31A3Q5VYP0 1347 aa20.69■□□□□ 0.9
SUMO1-207ENST00000409498 PNPLA6Q8IY17 1366 aa20.69■□□□□ 0.9
SUMO1-207ENST00000409498 NINLQ9Y2I6 1382 aa20.69■□□□□ 0.9
SUMO1-207ENST00000409498 CPSF1Q10570 1443 aaKnown RBP20.68■□□□□ 0.9
SUMO1-207ENST00000409498 COL22A1Q8NFW1 1626 aaPredicted RBP20.67■□□□□ 0.9
SUMO1-207ENST00000409498 XPCQ01831 940 aaPredicted RBP20.67■□□□□ 0.9
SUMO1-207ENST00000409498 ZNF692Q9BU19 519 aaPredicted RBP20.67■□□□□ 0.9
SUMO1-207ENST00000409498 SPATA31A6Q5VVP1 1343 aa20.67■□□□□ 0.9
SUMO1-207ENST00000409498 TNS3Q68CZ2 1445 aa20.66■□□□□ 0.9
SUMO1-207ENST00000409498 AKAP12Q02952 1782 aa20.66■□□□□ 0.9
SUMO1-207ENST00000409498 CD163L1Q9NR16 1453 aa20.65■□□□□ 0.9
SUMO1-207ENST00000409498 SSH2Q76I76 1423 aa20.65■□□□□ 0.9
SUMO1-207ENST00000409498 ALS2Q96Q42 1657 aa20.64■□□□□ 0.9
SUMO1-207ENST00000409498 USP6P35125 1406 aa20.64■□□□□ 0.89
SUMO1-207ENST00000409498 SLC12A5Q9H2X9 1139 aa20.63■□□□□ 0.89
SUMO1-207ENST00000409498 ARHGEF10O15013 1369 aa20.62■□□□□ 0.89
SUMO1-207ENST00000409498 MON2Q7Z3U7 1717 aa20.61■□□□□ 0.89
SUMO1-207ENST00000409498 TMC1Q8TDI8 760 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms