RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 ZNF335Q9H4Z2 1342 aaPredicted RBP21.3■■□□□ 1
AP1S3-204ENST00000409375 PLEKHH1Q9ULM0 1364 aa21.3■■□□□ 1
AP1S3-204ENST00000409375 STRCP1A6NGW2 1772 aa21.3■■□□□ 1
AP1S3-204ENST00000409375 EVC2Q86UK5 1308 aa21.29■■□□□ 1
AP1S3-204ENST00000409375 C14orf37Q86TY3 774 aa21.29■■□□□ 1
AP1S3-204ENST00000409375 MINK1Q8N4C8 1332 aaPredicted RBP21.29■■□□□ 1
AP1S3-204ENST00000409375 ADGRB2O60241 1585 aa21.28■■□□□ 1
AP1S3-204ENST00000409375 ADGRL3Q9HAR2 1447 aa21.26■□□□□ 0.99
AP1S3-204ENST00000409375 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.26■□□□□ 0.99
AP1S3-204ENST00000409375 TMEM94Q12767 1356 aa21.25■□□□□ 0.99
AP1S3-204ENST00000409375 PUS7Q96PZ0 661 aaKnown RBP21.24■□□□□ 0.99
AP1S3-204ENST00000409375 NALCNQ8IZF0 1738 aa21.23■□□□□ 0.99
AP1S3-204ENST00000409375 LRRC7Q96NW7 1537 aa21.23■□□□□ 0.99
AP1S3-204ENST00000409375 CDC42BPGQ6DT37 1551 aa21.23■□□□□ 0.99
AP1S3-204ENST00000409375 DISP3Q9P2K9 1392 aa21.23■□□□□ 0.99
AP1S3-204ENST00000409375 WASLO00401 505 aaPredicted RBP21.22■□□□□ 0.99
AP1S3-204ENST00000409375 SRPK2P78362 688 aaKnown RBP21.22■□□□□ 0.99
AP1S3-204ENST00000409375 TULP4Q9NRJ4 1543 aa21.22■□□□□ 0.99
AP1S3-204ENST00000409375 C19orf44Q9H6X5 657 aa21.21■□□□□ 0.99
AP1S3-204ENST00000409375 MSH6P52701 1360 aa21.21■□□□□ 0.99
AP1S3-204ENST00000409375 DCCP43146 1447 aa21.21■□□□□ 0.99
AP1S3-204ENST00000409375 CDK19Q9BWU1 502 aa21.2■□□□□ 0.98
AP1S3-204ENST00000409375 ATAD2Q6PL18 1390 aa21.2■□□□□ 0.98
AP1S3-204ENST00000409375 LTBP4Q8N2S1 1624 aa21.19■□□□□ 0.98
AP1S3-204ENST00000409375 CCDC7Q96M83 1385 aa21.19■□□□□ 0.98
AP1S3-204ENST00000409375 POLR3GLQ9BT43 218 aa21.18■□□□□ 0.98
AP1S3-204ENST00000409375 KIF7Q2M1P5 1343 aa21.18■□□□□ 0.98
AP1S3-204ENST00000409375 RBM33Q96EV2 1170 aaKnown RBP21.17■□□□□ 0.98
AP1S3-204ENST00000409375 XIRP1Q702N8 1843 aaKnown RBP21.16■□□□□ 0.98
AP1S3-204ENST00000409375 FMN2Q9NZ56 1722 aa21.16■□□□□ 0.98
AP1S3-204ENST00000409375 WASHC2AQ641Q2 1341 aa21.16■□□□□ 0.98
AP1S3-204ENST00000409375 ATF3P18847 181 aa21.16■□□□□ 0.98
AP1S3-204ENST00000409375 ANKARQ7Z5J8 1434 aa21.15■□□□□ 0.98
AP1S3-204ENST00000409375 NINLQ9Y2I6 1382 aa21.15■□□□□ 0.98
AP1S3-204ENST00000409375 C11orf95C9JLR9 678 aaPredicted RBP21.15■□□□□ 0.98
AP1S3-204ENST00000409375 CADPS2Q86UW7 1296 aa21.15■□□□□ 0.98
AP1S3-204ENST00000409375 CABP2Q9NPB3 220 aa21.14■□□□□ 0.97
AP1S3-204ENST00000409375 ITSN1Q15811 1721 aa21.13■□□□□ 0.97
AP1S3-204ENST00000409375 MYOM1P52179 1685 aa21.12■□□□□ 0.97
AP1S3-204ENST00000409375 NUDT16Q96DE0 195 aaKnown RBP21.11■□□□□ 0.97
AP1S3-204ENST00000409375 CCDC61Q9Y6R9 512 aa21.11■□□□□ 0.97
AP1S3-204ENST00000409375 ATP7BP35670 1465 aa21.1■□□□□ 0.97
AP1S3-204ENST00000409375 IQSEC2Q5JU85 1478 aa21.09■□□□□ 0.97
AP1S3-204ENST00000409375 TMC1Q8TDI8 760 aa21.09■□□□□ 0.97
AP1S3-204ENST00000409375 NUTM2FA1L443 756 aa21.07■□□□□ 0.96
AP1S3-204ENST00000409375 TOPAZ1Q8N9V7 1692 aa21.06■□□□□ 0.96
AP1S3-204ENST00000409375 PPIP5K1Q6PFW1 1433 aa21.06■□□□□ 0.96
AP1S3-204ENST00000409375 TERF2IPQ9NYB0 399 aa21.06■□□□□ 0.96
AP1S3-204ENST00000409375 USP32Q8NFA0 1604 aa21.06■□□□□ 0.96
AP1S3-204ENST00000409375 PRR36Q9H6K5 1346 aa21.04■□□□□ 0.96
AP1S3-204ENST00000409375 MST1RQ04912 1400 aa21.04■□□□□ 0.96
AP1S3-204ENST00000409375 HDGFL2Q7Z4V5 671 aaPredicted RBP21.04■□□□□ 0.96
AP1S3-204ENST00000409375 C1orf167Q5SNV9 1468 aa21.03■□□□□ 0.96
AP1S3-204ENST00000409375 DDX10Q13206 875 aaKnown RBP21.03■□□□□ 0.96
AP1S3-204ENST00000409375 CABP1Q9NZU7 370 aa21.03■□□□□ 0.96
AP1S3-204ENST00000409375 RGPD8O14715 1765 aaPredicted RBP21.02■□□□□ 0.96
AP1S3-204ENST00000409375 KIF1AQ12756 1690 aa21.02■□□□□ 0.95
AP1S3-204ENST00000409375 ANKRD36BQ8N2N9 1353 aa21.01■□□□□ 0.95
AP1S3-204ENST00000409375 PLEKHG3A1L390 1219 aa21.01■□□□□ 0.95
AP1S3-204ENST00000409375 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
AP1S3-204ENST00000409375 SLC12A5Q9H2X9 1139 aa21.01■□□□□ 0.95
AP1S3-204ENST00000409375 ZNF692Q9BU19 519 aaPredicted RBP21■□□□□ 0.95
AP1S3-204ENST00000409375 SLAIN2Q9P270 581 aa21■□□□□ 0.95
AP1S3-204ENST00000409375 PHF8Q9UPP1 1060 aa21■□□□□ 0.95
AP1S3-204ENST00000409375 TOM1O60784 492 aa20.99■□□□□ 0.95
AP1S3-204ENST00000409375 NGDNQ8NEJ9 315 aaKnown RBP20.99■□□□□ 0.95
AP1S3-204ENST00000409375 CERKQ8TCT0 537 aa20.99■□□□□ 0.95
AP1S3-204ENST00000409375 PANK3Q9H999 370 aa20.98■□□□□ 0.95
AP1S3-204ENST00000409375 PMFBP1Q8TBY8 1022 aa20.96■□□□□ 0.95
AP1S3-204ENST00000409375 ACEP12821 1306 aa20.96■□□□□ 0.95
AP1S3-204ENST00000409375 A0A1W2PP64 1363 aa20.96■□□□□ 0.95
AP1S3-204ENST00000409375 POLR3AO14802 1390 aaPredicted RBP20.96■□□□□ 0.95
AP1S3-204ENST00000409375 CPSF1Q10570 1443 aaKnown RBP20.95■□□□□ 0.95
AP1S3-204ENST00000409375 AKAP12Q02952 1782 aa20.95■□□□□ 0.94
AP1S3-204ENST00000409375 KNSTRNQ9Y448 316 aa20.95■□□□□ 0.94
AP1S3-204ENST00000409375 BRD4O60885 1362 aaPredicted RBP20.95■□□□□ 0.94
AP1S3-204ENST00000409375 KTN1Q86UP2 1357 aaKnown RBP20.95■□□□□ 0.94
AP1S3-204ENST00000409375 ORAI2Q96SN7 254 aa20.94■□□□□ 0.94
AP1S3-204ENST00000409375 CD163L1Q9NR16 1453 aa20.93■□□□□ 0.94
AP1S3-204ENST00000409375 MON2Q7Z3U7 1717 aa20.92■□□□□ 0.94
AP1S3-204ENST00000409375 NPHP3Q7Z494 1330 aa20.92■□□□□ 0.94
AP1S3-204ENST00000409375 EDC4Q6P2E9 1401 aaKnown RBP20.92■□□□□ 0.94
AP1S3-204ENST00000409375 UBAP1LF5GYI3 381 aa20.91■□□□□ 0.94
AP1S3-204ENST00000409375 USP6P35125 1406 aa20.91■□□□□ 0.94
AP1S3-204ENST00000409375 PSME1Q06323 249 aa20.91■□□□□ 0.94
AP1S3-204ENST00000409375 NSD3Q9BZ95 1437 aa20.9■□□□□ 0.94
AP1S3-204ENST00000409375 CGNL1Q0VF96 1302 aa20.9■□□□□ 0.94
AP1S3-204ENST00000409375 BRINP3Q76B58 766 aa20.9■□□□□ 0.94
AP1S3-204ENST00000409375 FOXO3O43524 673 aa20.88■□□□□ 0.93
AP1S3-204ENST00000409375 DIEXFQ68CQ4 756 aaKnown RBP20.88■□□□□ 0.93
AP1S3-204ENST00000409375 TTC21AQ8NDW8 1320 aa20.87■□□□□ 0.93
AP1S3-204ENST00000409375 ROBO1Q9Y6N7 1651 aa20.86■□□□□ 0.93
AP1S3-204ENST00000409375 NSD2O96028 1365 aa20.86■□□□□ 0.93
AP1S3-204ENST00000409375 PER1O15534 1290 aaPredicted RBP20.86■□□□□ 0.93
AP1S3-204ENST00000409375 CARD14Q9BXL6 1004 aa20.86■□□□□ 0.93
AP1S3-204ENST00000409375 NRKQ7Z2Y5 1582 aa20.85■□□□□ 0.93
AP1S3-204ENST00000409375 NPC1L1Q9UHC9 1359 aa20.85■□□□□ 0.93
AP1S3-204ENST00000409375 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
AP1S3-204ENST00000409375 KRT28Q7Z3Y7 464 aa20.84■□□□□ 0.93
AP1S3-204ENST00000409375 TTC21BQ7Z4L5 1316 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms