RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 USP32Q8NFA0 1604 aa25.83■■□□□ 1.73
LIMS2-204ENST00000409286 CABP2Q9NPB3 220 aa25.83■■□□□ 1.73
LIMS2-204ENST00000409286 SAFB2Q14151 953 aaKnown RBP eCLIP25.81■■□□□ 1.72
LIMS2-204ENST00000409286 SENP3Q9H4L4 574 aaPredicted RBP25.81■■□□□ 1.72
LIMS2-204ENST00000409286 ATAD2Q6PL18 1390 aa25.81■■□□□ 1.72
LIMS2-204ENST00000409286 RNF123Q5XPI4 1314 aa25.8■■□□□ 1.72
LIMS2-204ENST00000409286 ABCC11Q96J66 1382 aa25.8■■□□□ 1.72
LIMS2-204ENST00000409286 CGNL1Q0VF96 1302 aa25.8■■□□□ 1.72
LIMS2-204ENST00000409286 SENP3-EIF4A1A0A087X0R7 540 aa25.78■■□□□ 1.72
LIMS2-204ENST00000409286 SRPK2P78362 688 aaKnown RBP25.78■■□□□ 1.72
LIMS2-204ENST00000409286 MORC1Q86VD1 984 aa25.78■■□□□ 1.72
LIMS2-204ENST00000409286 NSD2O96028 1365 aa25.78■■□□□ 1.72
LIMS2-204ENST00000409286 SETD1AO15047 1707 aaKnown RBP25.77■■□□□ 1.72
LIMS2-204ENST00000409286 MINK1Q8N4C8 1332 aaPredicted RBP25.77■■□□□ 1.72
LIMS2-204ENST00000409286 IRX6P78412 446 aaPredicted RBP25.77■■□□□ 1.72
LIMS2-204ENST00000409286 POLR3AO14802 1390 aaPredicted RBP25.76■■□□□ 1.71
LIMS2-204ENST00000409286 TMEM2Q9UHN6 1383 aa25.76■■□□□ 1.71
LIMS2-204ENST00000409286 NLRP1Q9C000 1473 aa25.75■■□□□ 1.71
LIMS2-204ENST00000409286 SIRT1Q96EB6 747 aa25.74■■□□□ 1.71
LIMS2-204ENST00000409286 NRXN3Q9Y4C0 1643 aa25.74■■□□□ 1.71
LIMS2-204ENST00000409286 PPP4R2Q9NY27 417 aa25.73■■□□□ 1.71
LIMS2-204ENST00000409286 SALL2Q9Y467 1007 aaPredicted RBP25.73■■□□□ 1.71
LIMS2-204ENST00000409286 CDK19Q9BWU1 502 aa25.72■■□□□ 1.71
LIMS2-204ENST00000409286 FER1L4A9Z1Z3 1794 aa25.72■■□□□ 1.71
LIMS2-204ENST00000409286 UBR1Q8IWV7 1749 aa25.72■■□□□ 1.71
LIMS2-204ENST00000409286 TERF2IPQ9NYB0 399 aa25.71■■□□□ 1.71
LIMS2-204ENST00000409286 A0A1W2PP64 1363 aa25.69■■□□□ 1.7
LIMS2-204ENST00000409286 METP08581 1390 aa25.69■■□□□ 1.7
LIMS2-204ENST00000409286 DNAJC5Q9H3Z4 198 aa25.68■■□□□ 1.7
LIMS2-204ENST00000409286 C3P01024 1663 aa25.67■■□□□ 1.7
LIMS2-204ENST00000409286 WAPLQ7Z5K2 1190 aa25.67■■□□□ 1.7
LIMS2-204ENST00000409286 TECPR2O15040 1411 aa25.66■■□□□ 1.7
LIMS2-204ENST00000409286 FAM135BQ49AJ0 1406 aa25.66■■□□□ 1.7
LIMS2-204ENST00000409286 NGEFQ8N5V2 710 aa25.65■■□□□ 1.7
LIMS2-204ENST00000409286 HDGFL2Q7Z4V5 671 aaPredicted RBP25.64■■□□□ 1.7
LIMS2-204ENST00000409286 PLEKHH1Q9ULM0 1364 aa25.64■■□□□ 1.7
LIMS2-204ENST00000409286 CEBPAP49715 358 aaPredicted RBP25.64■■□□□ 1.69
LIMS2-204ENST00000409286 CDCA7LQ96GN5 454 aa25.64■■□□□ 1.69
LIMS2-204ENST00000409286 PLEKHG1Q9ULL1 1385 aa25.64■■□□□ 1.69
LIMS2-204ENST00000409286 CD163L1Q9NR16 1453 aa25.64■■□□□ 1.69
LIMS2-204ENST00000409286 KNDC1Q76NI1 1749 aa25.62■■□□□ 1.69
LIMS2-204ENST00000409286 ZNF521Q96K83 1311 aa25.62■■□□□ 1.69
LIMS2-204ENST00000409286 RCAN3Q9UKA8 241 aa25.62■■□□□ 1.69
LIMS2-204ENST00000409286 CFAP53Q96M91 514 aa25.61■■□□□ 1.69
LIMS2-204ENST00000409286 MED14O60244 1454 aa25.61■■□□□ 1.69
LIMS2-204ENST00000409286 TNNT2P45379 298 aaPredicted RBP25.6■■□□□ 1.69
LIMS2-204ENST00000409286 CABP1Q9NZU7 370 aa25.6■■□□□ 1.69
LIMS2-204ENST00000409286 ADAMTS13Q76LX8 1427 aa25.59■■□□□ 1.69
LIMS2-204ENST00000409286 WASLO00401 505 aaPredicted RBP25.59■■□□□ 1.69
LIMS2-204ENST00000409286 MTHFSP49914 203 aa25.59■■□□□ 1.69
LIMS2-204ENST00000409286 LTKP29376 864 aa25.58■■□□□ 1.69
LIMS2-204ENST00000409286 TXNDC2Q86VQ3 553 aa25.58■■□□□ 1.69
LIMS2-204ENST00000409286 EID1Q9Y6B2 187 aa25.58■■□□□ 1.69
LIMS2-204ENST00000409286 CPS1P31327 1500 aa25.58■■□□□ 1.69
LIMS2-204ENST00000409286 ATP7BP35670 1465 aa25.57■■□□□ 1.68
LIMS2-204ENST00000409286 SLIT1O75093 1534 aa25.56■■□□□ 1.68
LIMS2-204ENST00000409286 ARHGAP23Q9P227 1491 aa25.56■■□□□ 1.68
LIMS2-204ENST00000409286 FYB1O15117 783 aa25.56■■□□□ 1.68
LIMS2-204ENST00000409286 RRP1P56182 461 aaKnown RBP25.56■■□□□ 1.68
LIMS2-204ENST00000409286 GOLGA2Q08379 1002 aa25.56■■□□□ 1.68
LIMS2-204ENST00000409286 CCDC146Q8IYE0 955 aa25.56■■□□□ 1.68
LIMS2-204ENST00000409286 APAF1O14727 1248 aa25.55■■□□□ 1.68
LIMS2-204ENST00000409286 THEMISQ8N1K5 641 aaPredicted RBP25.53■■□□□ 1.68
LIMS2-204ENST00000409286 SHPRHQ149N8 1683 aa25.53■■□□□ 1.68
LIMS2-204ENST00000409286 GGNBP2Q9H3C7 697 aa25.52■■□□□ 1.68
LIMS2-204ENST00000409286 TSHZ2Q9NRE2 1034 aa25.52■■□□□ 1.68
LIMS2-204ENST00000409286 ANKRD26Q9UPS8 1709 aa25.5■■□□□ 1.67
LIMS2-204ENST00000409286 SLFN5Q08AF3 891 aa25.5■■□□□ 1.67
LIMS2-204ENST00000409286 DUSP27Q5VZP5 1158 aa25.5■■□□□ 1.67
LIMS2-204ENST00000409286 RUNDC1Q96C34 613 aa25.5■■□□□ 1.67
LIMS2-204ENST00000409286 TRMT2AQ8IZ69 625 aaKnown RBP25.49■■□□□ 1.67
LIMS2-204ENST00000409286 TBX22Q9Y458 520 aa25.48■■□□□ 1.67
LIMS2-204ENST00000409286 ROBO2Q9HCK4 1378 aa25.48■■□□□ 1.67
LIMS2-204ENST00000409286 CPSF1Q10570 1443 aaKnown RBP25.48■■□□□ 1.67
LIMS2-204ENST00000409286 NUDT16Q96DE0 195 aaKnown RBP25.48■■□□□ 1.67
LIMS2-204ENST00000409286 NCBP3Q53F19 620 aaKnown RBP25.47■■□□□ 1.67
LIMS2-204ENST00000409286 PPIP5K1Q6PFW1 1433 aa25.47■■□□□ 1.67
LIMS2-204ENST00000409286 CCDC61Q9Y6R9 512 aa25.46■■□□□ 1.67
LIMS2-204ENST00000409286 B4GALNT3Q6L9W6 998 aa25.45■■□□□ 1.67
LIMS2-204ENST00000409286 E9PSI1 815 aa25.44■■□□□ 1.66
LIMS2-204ENST00000409286 EDC4Q6P2E9 1401 aaKnown RBP25.44■■□□□ 1.66
LIMS2-204ENST00000409286 PLPPR3Q6T4P5 718 aa25.43■■□□□ 1.66
LIMS2-204ENST00000409286 RIMS1Q86UR5 1692 aaKnown RBP25.43■■□□□ 1.66
LIMS2-204ENST00000409286 KIF20BQ96Q89 1820 aa25.43■■□□□ 1.66
LIMS2-204ENST00000409286 ADGRB2O60241 1585 aa25.42■■□□□ 1.66
LIMS2-204ENST00000409286 DIP2AQ14689 1571 aa25.42■■□□□ 1.66
LIMS2-204ENST00000409286 SLC26A8Q96RN1 970 aa25.42■■□□□ 1.66
LIMS2-204ENST00000409286 ADAMTSL3P82987 1691 aa25.41■■□□□ 1.66
LIMS2-204ENST00000409286 PTPRUQ92729 1446 aa25.41■■□□□ 1.66
LIMS2-204ENST00000409286 ZNF692Q9BU19 519 aaPredicted RBP25.41■■□□□ 1.66
LIMS2-204ENST00000409286 CDC42BPGQ6DT37 1551 aa25.4■■□□□ 1.66
LIMS2-204ENST00000409286 COL3A1P02461 1466 aaPredicted RBP25.4■■□□□ 1.66
LIMS2-204ENST00000409286 PNPLA6Q8IY17 1366 aa25.4■■□□□ 1.66
LIMS2-204ENST00000409286 CEP170BQ9Y4F5 1589 aaPredicted RBP25.39■■□□□ 1.66
LIMS2-204ENST00000409286 WWC1Q8IX03 1113 aa25.39■■□□□ 1.66
LIMS2-204ENST00000409286 IQSEC2Q5JU85 1478 aa25.39■■□□□ 1.66
LIMS2-204ENST00000409286 U2AF1L5P0DN76 240 aaPredicted RBP25.39■■□□□ 1.65
LIMS2-204ENST00000409286 U2AF1Q01081 240 aaKnown RBP eCLIP25.39■■□□□ 1.65
LIMS2-204ENST00000409286 CCDC27Q2M243 656 aa25.39■■□□□ 1.65
LIMS2-204ENST00000409286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms