RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 MAMSTRQ6ZN01 415 aa5.41□□□□□ -1.54
LRRTM4-201ENST00000409088 SCAF11Q99590 1463 aaKnown RBP5.41□□□□□ -1.54
LRRTM4-201ENST00000409088 PER1O15534 1290 aaPredicted RBP5.41□□□□□ -1.54
LRRTM4-201ENST00000409088 FBXO31Q5XUX0 539 aaPredicted RBP5.41□□□□□ -1.54
LRRTM4-201ENST00000409088 VSIG10Q8N0Z9 540 aa5.41□□□□□ -1.54
LRRTM4-201ENST00000409088 COL17A1Q9UMD9 1497 aaPredicted RBP5.41□□□□□ -1.54
LRRTM4-201ENST00000409088 RALBP1Q15311 655 aa5.4□□□□□ -1.54
LRRTM4-201ENST00000409088 CC2D1BQ5T0F9 858 aaKnown RBP5.4□□□□□ -1.54
LRRTM4-201ENST00000409088 TMEM132EQ6IEE7 984 aa5.4□□□□□ -1.54
LRRTM4-201ENST00000409088 LAMC1P11047 1609 aa5.4□□□□□ -1.54
LRRTM4-201ENST00000409088 CDCA8Q53HL2 280 aa5.4□□□□□ -1.55
LRRTM4-201ENST00000409088 TRAK1Q9UPV9 953 aa5.4□□□□□ -1.55
LRRTM4-201ENST00000409088 SUPT16HQ9Y5B9 1047 aaKnown RBP5.4□□□□□ -1.55
LRRTM4-201ENST00000409088 KIF1BO60333 1816 aa5.4□□□□□ -1.55
LRRTM4-201ENST00000409088 RPGRIP1LQ68CZ1 1315 aa5.4□□□□□ -1.55
LRRTM4-201ENST00000409088 EIF3AQ14152 1382 aaKnown RBP5.4□□□□□ -1.55
LRRTM4-201ENST00000409088 LHX8Q68G74 356 aa5.4□□□□□ -1.55
LRRTM4-201ENST00000409088 SLC52A1Q9NWF4 448 aa5.4□□□□□ -1.55
LRRTM4-201ENST00000409088 MYOM2P54296 1465 aa5.39□□□□□ -1.55
LRRTM4-201ENST00000409088 SENP3-EIF4A1A0A087X0R7 540 aa5.39□□□□□ -1.55
LRRTM4-201ENST00000409088 C14orf93Q9H972 538 aaKnown RBP5.39□□□□□ -1.55
LRRTM4-201ENST00000409088 MYBBP1AQ9BQG0 1328 aaKnown RBP5.39□□□□□ -1.55
LRRTM4-201ENST00000409088 KTN1Q86UP2 1357 aaKnown RBP5.39□□□□□ -1.55
LRRTM4-201ENST00000409088 NEURL4Q96JN8 1562 aa5.39□□□□□ -1.55
LRRTM4-201ENST00000409088 RIOK3O14730 519 aaKnown RBP5.39□□□□□ -1.55
LRRTM4-201ENST00000409088 DCBLD2Q96PD2 775 aa5.39□□□□□ -1.55
LRRTM4-201ENST00000409088 ARHGAP31Q2M1Z3 1444 aa5.39□□□□□ -1.55
LRRTM4-201ENST00000409088 ADGRB3O60242 1522 aa5.39□□□□□ -1.55
LRRTM4-201ENST00000409088 PNISRQ8TF01 805 aaKnown RBP5.38□□□□□ -1.55
LRRTM4-201ENST00000409088 ZMYM4Q5VZL5 1548 aa5.38□□□□□ -1.55
LRRTM4-201ENST00000409088 CAMSAP1Q5T5Y3 1602 aa5.38□□□□□ -1.55
LRRTM4-201ENST00000409088 MROH2AA6NES4 1674 aa5.38□□□□□ -1.55
LRRTM4-201ENST00000409088 ESF1Q9H501 851 aaKnown RBP5.38□□□□□ -1.55
LRRTM4-201ENST00000409088 KNSTRNQ9Y448 316 aa5.38□□□□□ -1.55
LRRTM4-201ENST00000409088 GALR2O43603 387 aaPredicted RBP5.38□□□□□ -1.55
LRRTM4-201ENST00000409088 NEFLP07196 543 aa5.38□□□□□ -1.55
LRRTM4-201ENST00000409088 ZNF467Q7Z7K2 595 aaPredicted RBP5.38□□□□□ -1.55
LRRTM4-201ENST00000409088 PHF12Q96QT6 1004 aa5.38□□□□□ -1.55
LRRTM4-201ENST00000409088 CENPJQ9HC77 1338 aaPredicted RBP5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 NLRP13Q86W25 1043 aa5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 BCANQ96GW7 911 aa5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 SIGLEC1Q9BZZ2 1709 aa5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 MS4A3Q96HJ5 214 aa5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 SYNMO15061 1565 aa5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 NRXN1Q9ULB1 1477 aa5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 PIK3C2GO75747 1445 aa5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 BRD4O60885 1362 aaPredicted RBP5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 PARD3Q8TEW0 1356 aa5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 IQGAP1P46940 1657 aa5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 ZBED9Q6R2W3 1325 aa5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 ECM2O94769 699 aaPredicted RBP5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 STK26Q9P289 416 aa5.37□□□□□ -1.55
LRRTM4-201ENST00000409088 PLCB2Q00722 1185 aa5.36□□□□□ -1.55
LRRTM4-201ENST00000409088 SAFB2Q14151 953 aaKnown RBP eCLIP5.36□□□□□ -1.55
LRRTM4-201ENST00000409088 KIAA1210Q9ULL0 1709 aa5.36□□□□□ -1.55
LRRTM4-201ENST00000409088 IFT172Q9UG01 1749 aa5.36□□□□□ -1.55
LRRTM4-201ENST00000409088 KIF13AQ9H1H9 1805 aa5.35□□□□□ -1.55
LRRTM4-201ENST00000409088 KLHL34Q8N239 644 aa5.35□□□□□ -1.55
LRRTM4-201ENST00000409088 ZC3H13Q5T200 1668 aaKnown RBP5.35□□□□□ -1.55
LRRTM4-201ENST00000409088 SALL2Q9Y467 1007 aaPredicted RBP5.35□□□□□ -1.55
LRRTM4-201ENST00000409088 AGLP35573 1532 aa5.35□□□□□ -1.55
LRRTM4-201ENST00000409088 BMP2KQ9NSY1 1161 aaPredicted RBP5.35□□□□□ -1.55
LRRTM4-201ENST00000409088 PPLO60437 1756 aa5.35□□□□□ -1.55
LRRTM4-201ENST00000409088 PIK3C2BO00750 1634 aa5.35□□□□□ -1.55
LRRTM4-201ENST00000409088 ERVK-7P63135 1459 aa5.34□□□□□ -1.55
LRRTM4-201ENST00000409088 NEXMIFQ5QGS0 1516 aa5.34□□□□□ -1.55
LRRTM4-201ENST00000409088 IRX6P78412 446 aaPredicted RBP5.34□□□□□ -1.55
LRRTM4-201ENST00000409088 SLC12A5Q9H2X9 1139 aa5.34□□□□□ -1.55
LRRTM4-201ENST00000409088 CARD14Q9BXL6 1004 aa5.34□□□□□ -1.55
LRRTM4-201ENST00000409088 ZMYM3Q14202 1370 aa5.34□□□□□ -1.55
LRRTM4-201ENST00000409088 PREX1Q8TCU6 1659 aa5.34□□□□□ -1.55
LRRTM4-201ENST00000409088 REREQ9P2R6 1566 aa5.34□□□□□ -1.56
LRRTM4-201ENST00000409088 SETBP1Q9Y6X0 1596 aa5.34□□□□□ -1.56
LRRTM4-201ENST00000409088 SBNO2Q9Y2G9 1366 aa5.34□□□□□ -1.56
LRRTM4-201ENST00000409088 PPP2R1AP30153 589 aa5.34□□□□□ -1.56
LRRTM4-201ENST00000409088 PCDH10Q9P2E7 1040 aa5.34□□□□□ -1.56
LRRTM4-201ENST00000409088 ADGRB1O14514 1584 aa5.33□□□□□ -1.56
LRRTM4-201ENST00000409088 LRPPRCP42704 1394 aaKnown RBP5.33□□□□□ -1.56
LRRTM4-201ENST00000409088 SOX12O15370 315 aa5.33□□□□□ -1.56
LRRTM4-201ENST00000409088 MAP3K13O43283 966 aa5.33□□□□□ -1.56
LRRTM4-201ENST00000409088 POGKQ9P215 609 aa5.33□□□□□ -1.56
LRRTM4-201ENST00000409088 ZFYVE9O95405 1425 aa5.33□□□□□ -1.56
LRRTM4-201ENST00000409088 CLTCQ00610 1675 aaKnown RBP5.33□□□□□ -1.56
LRRTM4-201ENST00000409088 EVC2Q86UK5 1308 aa5.33□□□□□ -1.56
LRRTM4-201ENST00000409088 ARHGEF40Q8TER5 1519 aa5.33□□□□□ -1.56
LRRTM4-201ENST00000409088 CABP2Q9NPB3 220 aa5.33□□□□□ -1.56
LRRTM4-201ENST00000409088 TMEM131LA2VDJ0 1609 aa5.32□□□□□ -1.56
LRRTM4-201ENST00000409088 PRAM1Q96QH2 718 aa5.32□□□□□ -1.56
LRRTM4-201ENST00000409088 MINK1Q8N4C8 1332 aaPredicted RBP5.32□□□□□ -1.56
LRRTM4-201ENST00000409088 SRPK2P78362 688 aaKnown RBP5.32□□□□□ -1.56
LRRTM4-201ENST00000409088 KDM5AP29375 1690 aaKnown RBP5.32□□□□□ -1.56
LRRTM4-201ENST00000409088 ASXL1Q8IXJ9 1541 aa5.32□□□□□ -1.56
LRRTM4-201ENST00000409088 TTLL13PA6NNM8 815 aa5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 CEBPAP49715 358 aaPredicted RBP5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 ADAMTS8Q9UP79 889 aa5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 NUDCQ9Y266 331 aa5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 MYO5BQ9ULV0 1848 aa5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 RIMS2Q9UQ26 1411 aa5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 A2ML1A8K2U0 1454 aa5.31□□□□□ -1.56
LRRTM4-201ENST00000409088 TNNT2P45379 298 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms