RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 YTHDC2Q9H6S0 1430 aaKnown RBP18.75■□□□□ 0.59
SNORD88B-201ENST00000408454 C14orf93Q9H972 538 aaKnown RBP18.75■□□□□ 0.59
SNORD88B-201ENST00000408454 STK26Q9P289 416 aa18.74■□□□□ 0.59
SNORD88B-201ENST00000408454 NUTM2BA6NNL0 878 aaPredicted RBP18.73■□□□□ 0.59
SNORD88B-201ENST00000408454 NUTM2EB1AL46 878 aaPredicted RBP18.73■□□□□ 0.59
SNORD88B-201ENST00000408454 ESCO1Q5FWF5 840 aa18.73■□□□□ 0.59
SNORD88B-201ENST00000408454 NUTM2AQ8IVF1 878 aaPredicted RBP18.73■□□□□ 0.59
SNORD88B-201ENST00000408454 NRXN1Q9ULB1 1477 aa18.72■□□□□ 0.59
SNORD88B-201ENST00000408454 RGS17Q9UGC6 210 aaPredicted RBP18.72■□□□□ 0.59
SNORD88B-201ENST00000408454 SOS2Q07890 1332 aaPredicted RBP18.72■□□□□ 0.59
SNORD88B-201ENST00000408454 PNPLA6Q8IY17 1366 aa18.71■□□□□ 0.59
SNORD88B-201ENST00000408454 POGKQ9P215 609 aa18.71■□□□□ 0.59
SNORD88B-201ENST00000408454 RXRBP28702 533 aa18.7■□□□□ 0.58
SNORD88B-201ENST00000408454 NGLY1Q96IV0 654 aa18.7■□□□□ 0.58
SNORD88B-201ENST00000408454 CDK12Q9NYV4 1490 aaPredicted RBP18.7■□□□□ 0.58
SNORD88B-201ENST00000408454 PSME1Q06323 249 aa18.69■□□□□ 0.58
SNORD88B-201ENST00000408454 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
SNORD88B-201ENST00000408454 KIF1AQ12756 1690 aa18.69■□□□□ 0.58
SNORD88B-201ENST00000408454 DLC1Q96QB1 1528 aa18.68■□□□□ 0.58
SNORD88B-201ENST00000408454 LRP6O75581 1613 aa18.67■□□□□ 0.58
SNORD88B-201ENST00000408454 TMEM132EQ6IEE7 984 aa18.67■□□□□ 0.58
SNORD88B-201ENST00000408454 ORAI2Q96SN7 254 aa18.66■□□□□ 0.58
SNORD88B-201ENST00000408454 DCAF11Q8TEB1 546 aa18.65■□□□□ 0.58
SNORD88B-201ENST00000408454 C8orf37Q96NL8 207 aa18.65■□□□□ 0.58
SNORD88B-201ENST00000408454 AFF2P51816 1311 aa18.65■□□□□ 0.58
SNORD88B-201ENST00000408454 ANKARQ7Z5J8 1434 aa18.65■□□□□ 0.58
SNORD88B-201ENST00000408454 CFAP70Q5T0N1 1121 aa18.64■□□□□ 0.57
SNORD88B-201ENST00000408454 WAPLQ7Z5K2 1190 aa18.64■□□□□ 0.57
SNORD88B-201ENST00000408454 RBM6P78332 1123 aaKnown RBP18.63■□□□□ 0.57
SNORD88B-201ENST00000408454 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
SNORD88B-201ENST00000408454 FMN2Q9NZ56 1722 aa18.61■□□□□ 0.57
SNORD88B-201ENST00000408454 COL22A1Q8NFW1 1626 aaPredicted RBP18.61■□□□□ 0.57
SNORD88B-201ENST00000408454 FOXO3O43524 673 aa18.61■□□□□ 0.57
SNORD88B-201ENST00000408454 PRAM1Q96QH2 718 aa18.61■□□□□ 0.57
SNORD88B-201ENST00000408454 TRPC5Q9UL62 973 aaPredicted RBP18.61■□□□□ 0.57
SNORD88B-201ENST00000408454 ARHGEF10O15013 1369 aa18.6■□□□□ 0.57
SNORD88B-201ENST00000408454 PHF8Q9UPP1 1060 aa18.6■□□□□ 0.57
SNORD88B-201ENST00000408454 ADAMTS2O95450 1211 aa18.59■□□□□ 0.57
SNORD88B-201ENST00000408454 QTRT2Q9H974 415 aaKnown RBP18.59■□□□□ 0.57
SNORD88B-201ENST00000408454 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
SNORD88B-201ENST00000408454 GPRASP1Q5JY77 1395 aa18.58■□□□□ 0.57
SNORD88B-201ENST00000408454 USP21Q9UK80 565 aa18.58■□□□□ 0.56
SNORD88B-201ENST00000408454 ADGRB2O60241 1585 aa18.58■□□□□ 0.56
SNORD88B-201ENST00000408454 PXDNQ92626 1479 aa18.58■□□□□ 0.56
SNORD88B-201ENST00000408454 DDX17Q92841 729 aaKnown RBP18.57■□□□□ 0.56
SNORD88B-201ENST00000408454 KRT28Q7Z3Y7 464 aa18.56■□□□□ 0.56
SNORD88B-201ENST00000408454 SBNO1A3KN83 1393 aa18.55■□□□□ 0.56
SNORD88B-201ENST00000408454 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
SNORD88B-201ENST00000408454 NUTM2FA1L443 756 aa18.55■□□□□ 0.56
SNORD88B-201ENST00000408454 FNBP4Q8N3X1 1017 aaPredicted RBP18.55■□□□□ 0.56
SNORD88B-201ENST00000408454 TRAK1Q9UPV9 953 aa18.55■□□□□ 0.56
SNORD88B-201ENST00000408454 SPATA31A3Q5VYP0 1347 aa18.54■□□□□ 0.56
SNORD88B-201ENST00000408454 TNS3Q68CZ2 1445 aa18.54■□□□□ 0.56
SNORD88B-201ENST00000408454 ADGRB1O14514 1584 aa18.54■□□□□ 0.56
SNORD88B-201ENST00000408454 SAFB2Q14151 953 aaKnown RBP eCLIP18.52■□□□□ 0.56
SNORD88B-201ENST00000408454 KIAA1210Q9ULL0 1709 aa18.52■□□□□ 0.55
SNORD88B-201ENST00000408454 TULP4Q9NRJ4 1543 aa18.51■□□□□ 0.55
SNORD88B-201ENST00000408454 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
SNORD88B-201ENST00000408454 WASLO00401 505 aaPredicted RBP18.5■□□□□ 0.55
SNORD88B-201ENST00000408454 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
SNORD88B-201ENST00000408454 NGDNQ8NEJ9 315 aaKnown RBP18.49■□□□□ 0.55
SNORD88B-201ENST00000408454 XPCQ01831 940 aaPredicted RBP18.48■□□□□ 0.55
SNORD88B-201ENST00000408454 MINK1Q8N4C8 1332 aaPredicted RBP18.48■□□□□ 0.55
SNORD88B-201ENST00000408454 ITSN1Q15811 1721 aa18.46■□□□□ 0.55
SNORD88B-201ENST00000408454 CCDC125Q86Z20 511 aa18.46■□□□□ 0.55
SNORD88B-201ENST00000408454 MARF1Q9Y4F3 1742 aaKnown RBP18.46■□□□□ 0.55
SNORD88B-201ENST00000408454 UNC5CLQ8IV45 518 aa18.45■□□□□ 0.54
SNORD88B-201ENST00000408454 ATRNO75882 1429 aa18.45■□□□□ 0.54
SNORD88B-201ENST00000408454 RGS12O14924 1447 aa18.43■□□□□ 0.54
SNORD88B-201ENST00000408454 USP32Q8NFA0 1604 aa18.43■□□□□ 0.54
SNORD88B-201ENST00000408454 UPF1Q92900 1129 aaKnown RBP eCLIP18.43■□□□□ 0.54
SNORD88B-201ENST00000408454 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
SNORD88B-201ENST00000408454 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
SNORD88B-201ENST00000408454 PMFBP1Q8TBY8 1022 aa18.42■□□□□ 0.54
SNORD88B-201ENST00000408454 GJD4Q96KN9 370 aaPredicted RBP18.42■□□□□ 0.54
SNORD88B-201ENST00000408454 HIRIP3Q9BW71 556 aaPredicted RBP18.42■□□□□ 0.54
SNORD88B-201ENST00000408454 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
SNORD88B-201ENST00000408454 ATP7BP35670 1465 aa18.41■□□□□ 0.54
SNORD88B-201ENST00000408454 ARHGEF28Q8N1W1 1705 aaKnown RBP18.4■□□□□ 0.54
SNORD88B-201ENST00000408454 CENPJQ9HC77 1338 aaPredicted RBP18.4■□□□□ 0.54
SNORD88B-201ENST00000408454 PAK3O75914 559 aaPredicted RBP18.39■□□□□ 0.53
SNORD88B-201ENST00000408454 NUDT16Q96DE0 195 aaKnown RBP18.39■□□□□ 0.53
SNORD88B-201ENST00000408454 BCL9LQ86UU0 1499 aa18.39■□□□□ 0.53
SNORD88B-201ENST00000408454 SLIT2O94813 1529 aa18.39■□□□□ 0.53
SNORD88B-201ENST00000408454 NWD2Q9ULI1 1742 aa18.38■□□□□ 0.53
SNORD88B-201ENST00000408454 CCDC9Q9Y3X0 531 aaKnown RBP18.38■□□□□ 0.53
SNORD88B-201ENST00000408454 SRPK2P78362 688 aaKnown RBP18.37■□□□□ 0.53
SNORD88B-201ENST00000408454 VPS72Q15906 364 aa18.37■□□□□ 0.53
SNORD88B-201ENST00000408454 SLC24A1O60721 1099 aa18.36■□□□□ 0.53
SNORD88B-201ENST00000408454 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
SNORD88B-201ENST00000408454 CDK19Q9BWU1 502 aa18.36■□□□□ 0.53
SNORD88B-201ENST00000408454 RGPD8O14715 1765 aaPredicted RBP18.35■□□□□ 0.53
SNORD88B-201ENST00000408454 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
SNORD88B-201ENST00000408454 POLR3AO14802 1390 aaPredicted RBP18.33■□□□□ 0.53
SNORD88B-201ENST00000408454 PLEKHG3A1L390 1219 aa18.33■□□□□ 0.52
SNORD88B-201ENST00000408454 PRDM11Q9NQV5 511 aa18.33■□□□□ 0.52
SNORD88B-201ENST00000408454 ROCK2O75116 1388 aaKnown RBP18.32■□□□□ 0.52
SNORD88B-201ENST00000408454 PRR36Q9H6K5 1346 aa18.32■□□□□ 0.52
SNORD88B-201ENST00000408454 COL14A1Q05707 1796 aaKnown RBP18.32■□□□□ 0.52
SNORD88B-201ENST00000408454 RALGAPBQ86X10 1494 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms