RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 BCL2L13Q9BXK5 485 aa12.96□□□□□ -0.33
LTBP1-204ENST00000407925 RBM33Q96EV2 1170 aaKnown RBP12.96□□□□□ -0.34
LTBP1-204ENST00000407925 DHX57Q6P158 1386 aaKnown RBP12.95□□□□□ -0.34
LTBP1-204ENST00000407925 VPS37CA5D8V6 355 aaPredicted RBP12.95□□□□□ -0.34
LTBP1-204ENST00000407925 OFD1O75665 1012 aa12.95□□□□□ -0.34
LTBP1-204ENST00000407925 PDCP20941 246 aa12.95□□□□□ -0.34
LTBP1-204ENST00000407925 CDC45O75419 566 aa12.95□□□□□ -0.34
LTBP1-204ENST00000407925 PSME1Q06323 249 aa12.95□□□□□ -0.34
LTBP1-204ENST00000407925 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
LTBP1-204ENST00000407925 MBD3O95983 291 aa12.95□□□□□ -0.34
LTBP1-204ENST00000407925 TOP2AP11388 1531 aaKnown RBP12.95□□□□□ -0.34
LTBP1-204ENST00000407925 MSH5O43196 834 aa12.94□□□□□ -0.34
LTBP1-204ENST00000407925 CNKSR2Q8WXI2 1034 aa12.94□□□□□ -0.34
LTBP1-204ENST00000407925 CWC22Q9HCG8 908 aaKnown RBP12.94□□□□□ -0.34
LTBP1-204ENST00000407925 MYOM3Q5VTT5 1437 aa12.94□□□□□ -0.34
LTBP1-204ENST00000407925 GNAI3P08754 354 aa12.94□□□□□ -0.34
LTBP1-204ENST00000407925 MINK1Q8N4C8 1332 aaPredicted RBP12.94□□□□□ -0.34
LTBP1-204ENST00000407925 RAD21O60216 631 aa12.94□□□□□ -0.34
LTBP1-204ENST00000407925 CCDC39Q9UFE4 941 aa12.94□□□□□ -0.34
LTBP1-204ENST00000407925 AEBP2Q6ZN18 517 aaPredicted RBP12.93□□□□□ -0.34
LTBP1-204ENST00000407925 TSPYL4Q9UJ04 414 aa12.93□□□□□ -0.34
LTBP1-204ENST00000407925 FAM43AQ8N2R8 423 aa12.93□□□□□ -0.34
LTBP1-204ENST00000407925 CALRP27797 417 aaKnown RBP12.93□□□□□ -0.34
LTBP1-204ENST00000407925 EPS15P42566 896 aa12.93□□□□□ -0.34
LTBP1-204ENST00000407925 CNTROBQ8N137 903 aa12.92□□□□□ -0.34
LTBP1-204ENST00000407925 TBC1D2BQ9UPU7 963 aa12.92□□□□□ -0.34
LTBP1-204ENST00000407925 MRE11P49959 708 aa12.92□□□□□ -0.34
LTBP1-204ENST00000407925 NAP1L1P55209 391 aaKnown RBP12.92□□□□□ -0.34
LTBP1-204ENST00000407925 C22orf23Q9BZE7 217 aa12.92□□□□□ -0.34
LTBP1-204ENST00000407925 CWC15Q9P013 229 aaKnown RBP12.92□□□□□ -0.34
LTBP1-204ENST00000407925 MROH2BQ7Z745 1585 aa12.91□□□□□ -0.34
LTBP1-204ENST00000407925 SLC3A2P08195 630 aaKnown RBP12.91□□□□□ -0.34
LTBP1-204ENST00000407925 UBTFL1P0CB47 393 aaPredicted RBP12.91□□□□□ -0.34
LTBP1-204ENST00000407925 TXLNBQ8N3L3 684 aa12.91□□□□□ -0.34
LTBP1-204ENST00000407925 SMARCE1Q969G3 411 aa12.91□□□□□ -0.34
LTBP1-204ENST00000407925 RIC3Q7Z5B4 369 aa12.91□□□□□ -0.34
LTBP1-204ENST00000407925 ERC1Q8IUD2 1116 aa12.91□□□□□ -0.34
LTBP1-204ENST00000407925 IFT57Q9NWB7 429 aa12.91□□□□□ -0.34
LTBP1-204ENST00000407925 FILIP1LQ4L180 1135 aa12.91□□□□□ -0.34
LTBP1-204ENST00000407925 CCDC191Q8NCU4 936 aa12.91□□□□□ -0.34
LTBP1-204ENST00000407925 TXLNAP40222 546 aa12.9□□□□□ -0.34
LTBP1-204ENST00000407925 FOXD4L6Q3SYB3 417 aaPredicted RBP12.9□□□□□ -0.34
LTBP1-204ENST00000407925 FOXD4L3Q6VB84 417 aaPredicted RBP12.9□□□□□ -0.34
LTBP1-204ENST00000407925 CLASRPQ8N2M8 674 aaKnown RBP12.9□□□□□ -0.34
LTBP1-204ENST00000407925 SDF4Q9BRK5 362 aa12.9□□□□□ -0.34
LTBP1-204ENST00000407925 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.9□□□□□ -0.34
LTBP1-204ENST00000407925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.9□□□□□ -0.353e-6■■■■■ 81.7
LTBP1-204ENST00000407925 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
LTBP1-204ENST00000407925 PLIN1O60240 522 aa12.89□□□□□ -0.35
LTBP1-204ENST00000407925 HMGB2P26583 209 aaKnown RBP12.89□□□□□ -0.35
LTBP1-204ENST00000407925 WASHC4Q2M389 1173 aa12.89□□□□□ -0.35
LTBP1-204ENST00000407925 JMYQ8N9B5 988 aa12.89□□□□□ -0.35
LTBP1-204ENST00000407925 LUC7LQ9NQ29 371 aaKnown RBP12.89□□□□□ -0.35
LTBP1-204ENST00000407925 ZNF396Q96N95 335 aaPredicted RBP12.88□□□□□ -0.35
LTBP1-204ENST00000407925 PDIA4P13667 645 aaKnown RBP12.88□□□□□ -0.35
LTBP1-204ENST00000407925 CCDC30Q5VVM6 783 aa12.88□□□□□ -0.35
LTBP1-204ENST00000407925 WWC2Q6AWC2 1192 aa12.88□□□□□ -0.35
LTBP1-204ENST00000407925 SCAPERQ9BY12 1400 aa12.88□□□□□ -0.35
LTBP1-204ENST00000407925 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
LTBP1-204ENST00000407925 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
LTBP1-204ENST00000407925 KINO60870 393 aaKnown RBP12.87□□□□□ -0.35
LTBP1-204ENST00000407925 ATF3P18847 181 aa12.87□□□□□ -0.35
LTBP1-204ENST00000407925 HSP90AB2PQ58FF8 381 aa12.87□□□□□ -0.35
LTBP1-204ENST00000407925 ZRSR2Q15696 482 aaKnown RBP12.87□□□□□ -0.35
LTBP1-204ENST00000407925 NEUROD6Q96NK8 337 aa12.87□□□□□ -0.35
LTBP1-204ENST00000407925 PATL2C9JE40 543 aaKnown RBP12.86□□□□□ -0.35
LTBP1-204ENST00000407925 CNTLNQ9NXG0 1405 aa12.86□□□□□ -0.35
LTBP1-204ENST00000407925 CUX1P39880 1505 aa12.86□□□□□ -0.35
LTBP1-204ENST00000407925 RABEP1Q15276 862 aa12.86□□□□□ -0.35
LTBP1-204ENST00000407925 CAGE1Q8TC20 777 aa12.86□□□□□ -0.35
LTBP1-204ENST00000407925 MAGEC2Q9UBF1 373 aaPredicted RBP12.86□□□□□ -0.35
LTBP1-204ENST00000407925 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
LTBP1-204ENST00000407925 SYTL4Q96C24 671 aaPredicted RBP12.86□□□□□ -0.35
LTBP1-204ENST00000407925 MEX3CQ5U5Q3 659 aaKnown RBP12.85□□□□□ -0.35
LTBP1-204ENST00000407925 ERLIN2O94905 339 aa12.85□□□□□ -0.35
LTBP1-204ENST00000407925 GCC1Q96CN9 775 aa12.85□□□□□ -0.35
LTBP1-204ENST00000407925 FSD1Q9BTV5 496 aa12.85□□□□□ -0.35
LTBP1-204ENST00000407925 DACH1Q9UI36 760 aa12.85□□□□□ -0.35
LTBP1-204ENST00000407925 CT47B1P0C2W7 299 aaPredicted RBP12.85□□□□□ -0.35
LTBP1-204ENST00000407925 LNPKQ9C0E8 428 aa12.85□□□□□ -0.35
LTBP1-204ENST00000407925 FAM13BQ9NYF5 915 aa12.85□□□□□ -0.35
LTBP1-204ENST00000407925 GNL3LQ9NVN8 582 aaKnown RBP12.85□□□□□ -0.35
LTBP1-204ENST00000407925 CCDC66A2RUB6 948 aa12.84□□□□□ -0.35
LTBP1-204ENST00000407925 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
LTBP1-204ENST00000407925 ANKRD1Q15327 319 aa12.84□□□□□ -0.35
LTBP1-204ENST00000407925 CCAR1Q8IX12 1150 aaKnown RBP12.84□□□□□ -0.35
LTBP1-204ENST00000407925 GPRASP1Q5JY77 1395 aa12.84□□□□□ -0.35
LTBP1-204ENST00000407925 NASPP49321 788 aaPredicted RBP12.84□□□□□ -0.35
LTBP1-204ENST00000407925 CDK5RAP3Q96JB5 506 aa12.84□□□□□ -0.35
LTBP1-204ENST00000407925 PNISRQ8TF01 805 aaKnown RBP12.84□□□□□ -0.35
LTBP1-204ENST00000407925 SYCP1Q15431 976 aa12.84□□□□□ -0.35
LTBP1-204ENST00000407925 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
LTBP1-204ENST00000407925 ZNHIT6Q9NWK9 470 aaKnown RBP12.84□□□□□ -0.35
LTBP1-204ENST00000407925 ANKRD18AQ8IVF6 992 aa12.83□□□□□ -0.36
LTBP1-204ENST00000407925 VSIG10Q8N0Z9 540 aa12.83□□□□□ -0.36
LTBP1-204ENST00000407925 CCDC7Q96M83 1385 aa12.83□□□□□ -0.36
LTBP1-204ENST00000407925 RRBP1Q9P2E9 1410 aaKnown RBP12.83□□□□□ -0.36
LTBP1-204ENST00000407925 ZFYVE27Q5T4F4 411 aa12.83□□□□□ -0.36
LTBP1-204ENST00000407925 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
LTBP1-204ENST00000407925 CAVIN1Q6NZI2 390 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms