RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 STK26Q9P289 416 aa22.03■■□□□ 1.12
PIKFYVE-204ENST00000407449 RCAN3Q9UKA8 241 aa22.03■■□□□ 1.12
PIKFYVE-204ENST00000407449 NSD2O96028 1365 aa22.02■■□□□ 1.12
PIKFYVE-204ENST00000407449 CDCA7LQ96GN5 454 aa22.01■■□□□ 1.11
PIKFYVE-204ENST00000407449 CGNL1Q0VF96 1302 aa22.01■■□□□ 1.11
PIKFYVE-204ENST00000407449 RRP1P56182 461 aaKnown RBP22■■□□□ 1.11
PIKFYVE-204ENST00000407449 MORC1Q86VD1 984 aa22■■□□□ 1.11
PIKFYVE-204ENST00000407449 ESF1Q9H501 851 aaKnown RBP22■■□□□ 1.11
PIKFYVE-204ENST00000407449 ZMYM3Q14202 1370 aa22■■□□□ 1.11
PIKFYVE-204ENST00000407449 SHPRHQ149N8 1683 aa22■■□□□ 1.11
PIKFYVE-204ENST00000407449 ATAD2Q6PL18 1390 aa21.99■■□□□ 1.11
PIKFYVE-204ENST00000407449 PLEKHH1Q9ULM0 1364 aa21.99■■□□□ 1.11
PIKFYVE-204ENST00000407449 CABP2Q9NPB3 220 aa21.99■■□□□ 1.11
PIKFYVE-204ENST00000407449 B4GALNT3Q6L9W6 998 aa21.98■■□□□ 1.11
PIKFYVE-204ENST00000407449 SAFB2Q14151 953 aaKnown RBP eCLIP21.98■■□□□ 1.11
PIKFYVE-204ENST00000407449 PRAM1Q96QH2 718 aa21.98■■□□□ 1.11
PIKFYVE-204ENST00000407449 NRXN3Q9Y4C0 1643 aa21.98■■□□□ 1.11
PIKFYVE-204ENST00000407449 ZNF521Q96K83 1311 aa21.97■■□□□ 1.11
PIKFYVE-204ENST00000407449 POGKQ9P215 609 aa21.96■■□□□ 1.11
PIKFYVE-204ENST00000407449 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
PIKFYVE-204ENST00000407449 SRPK2P78362 688 aaKnown RBP21.95■■□□□ 1.1
PIKFYVE-204ENST00000407449 ANKRD26Q9UPS8 1709 aa21.95■■□□□ 1.1
PIKFYVE-204ENST00000407449 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.94■■□□□ 1.1
PIKFYVE-204ENST00000407449 MINK1Q8N4C8 1332 aaPredicted RBP21.94■■□□□ 1.1
PIKFYVE-204ENST00000407449 A0A1W2PP64 1363 aa21.94■■□□□ 1.1
PIKFYVE-204ENST00000407449 TNRQ92752 1358 aa21.94■■□□□ 1.1
PIKFYVE-204ENST00000407449 ABCC11Q96J66 1382 aa21.94■■□□□ 1.1
PIKFYVE-204ENST00000407449 NGEFQ8N5V2 710 aa21.93■■□□□ 1.1
PIKFYVE-204ENST00000407449 KNDC1Q76NI1 1749 aa21.92■■□□□ 1.1
PIKFYVE-204ENST00000407449 UBR1Q8IWV7 1749 aa21.92■■□□□ 1.1
PIKFYVE-204ENST00000407449 GOLGA2Q08379 1002 aa21.9■■□□□ 1.1
PIKFYVE-204ENST00000407449 CCDC146Q8IYE0 955 aa21.9■■□□□ 1.1
PIKFYVE-204ENST00000407449 CD163L1Q9NR16 1453 aa21.9■■□□□ 1.1
PIKFYVE-204ENST00000407449 MED14O60244 1454 aa21.89■■□□□ 1.09
PIKFYVE-204ENST00000407449 CCDC136Q96JN2 1154 aa21.88■■□□□ 1.09
PIKFYVE-204ENST00000407449 TERF2IPQ9NYB0 399 aa21.88■■□□□ 1.09
PIKFYVE-204ENST00000407449 DUSP27Q5VZP5 1158 aa21.88■■□□□ 1.09
PIKFYVE-204ENST00000407449 APAF1O14727 1248 aa21.87■■□□□ 1.09
PIKFYVE-204ENST00000407449 TNNT2P45379 298 aaPredicted RBP21.87■■□□□ 1.09
PIKFYVE-204ENST00000407449 CFAP53Q96M91 514 aa21.87■■□□□ 1.09
PIKFYVE-204ENST00000407449 KIF20BQ96Q89 1820 aa21.87■■□□□ 1.09
PIKFYVE-204ENST00000407449 HDGFP51858 240 aaKnown RBP21.86■■□□□ 1.09
PIKFYVE-204ENST00000407449 CDK19Q9BWU1 502 aa21.86■■□□□ 1.09
PIKFYVE-204ENST00000407449 SLFN5Q08AF3 891 aa21.85■■□□□ 1.09
PIKFYVE-204ENST00000407449 RBM19Q9Y4C8 960 aaKnown RBP21.85■■□□□ 1.09
PIKFYVE-204ENST00000407449 CPS1P31327 1500 aa21.84■■□□□ 1.09
PIKFYVE-204ENST00000407449 IQSEC2Q5JU85 1478 aa21.84■■□□□ 1.09
PIKFYVE-204ENST00000407449 NLRP1Q9C000 1473 aa21.84■■□□□ 1.09
PIKFYVE-204ENST00000407449 MTHFSP49914 203 aa21.83■■□□□ 1.09
PIKFYVE-204ENST00000407449 ATP7BP35670 1465 aa21.83■■□□□ 1.09
PIKFYVE-204ENST00000407449 TECPR2O15040 1411 aa21.83■■□□□ 1.09
PIKFYVE-204ENST00000407449 HDGFL2Q7Z4V5 671 aaPredicted RBP21.83■■□□□ 1.08
PIKFYVE-204ENST00000407449 TRMT2AQ8IZ69 625 aaKnown RBP21.83■■□□□ 1.08
PIKFYVE-204ENST00000407449 TMEM2Q9UHN6 1383 aa21.82■■□□□ 1.08
PIKFYVE-204ENST00000407449 METP08581 1390 aa21.82■■□□□ 1.08
PIKFYVE-204ENST00000407449 EXOC6Q8TAG9 804 aa21.81■■□□□ 1.08
PIKFYVE-204ENST00000407449 FAM135BQ49AJ0 1406 aa21.81■■□□□ 1.08
PIKFYVE-204ENST00000407449 RUNDC1Q96C34 613 aa21.8■■□□□ 1.08
PIKFYVE-204ENST00000407449 NKTRP30414 1462 aaKnown RBP21.8■■□□□ 1.08
PIKFYVE-204ENST00000407449 WAPLQ7Z5K2 1190 aa21.79■■□□□ 1.08
PIKFYVE-204ENST00000407449 E9PSI1 815 aa21.79■■□□□ 1.08
PIKFYVE-204ENST00000407449 SIRT1Q96EB6 747 aa21.79■■□□□ 1.08
PIKFYVE-204ENST00000407449 C3P01024 1663 aa21.79■■□□□ 1.08
PIKFYVE-204ENST00000407449 FER1L4A9Z1Z3 1794 aa21.77■■□□□ 1.08
PIKFYVE-204ENST00000407449 FYB1O15117 783 aa21.77■■□□□ 1.08
PIKFYVE-204ENST00000407449 GGNBP2Q9H3C7 697 aa21.77■■□□□ 1.08
PIKFYVE-204ENST00000407449 COL3A1P02461 1466 aaPredicted RBP21.77■■□□□ 1.07
PIKFYVE-204ENST00000407449 ADGRB2O60241 1585 aa21.76■■□□□ 1.07
PIKFYVE-204ENST00000407449 CABP1Q9NZU7 370 aa21.76■■□□□ 1.07
PIKFYVE-204ENST00000407449 PLIN1O60240 522 aa21.75■■□□□ 1.07
PIKFYVE-204ENST00000407449 PLEKHG1Q9ULL1 1385 aa21.74■■□□□ 1.07
PIKFYVE-204ENST00000407449 ADAMTS13Q76LX8 1427 aa21.74■■□□□ 1.07
PIKFYVE-204ENST00000407449 WASLO00401 505 aaPredicted RBP21.73■■□□□ 1.07
PIKFYVE-204ENST00000407449 NCBP3Q53F19 620 aaKnown RBP21.73■■□□□ 1.07
PIKFYVE-204ENST00000407449 WWC1Q8IX03 1113 aa21.73■■□□□ 1.07
PIKFYVE-204ENST00000407449 SPINK5Q9NQ38 1064 aaPredicted RBP21.73■■□□□ 1.07
PIKFYVE-204ENST00000407449 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.72■■□□□ 1.07
PIKFYVE-204ENST00000407449 CDC42BPGQ6DT37 1551 aa21.72■■□□□ 1.07
PIKFYVE-204ENST00000407449 TCP11L2Q8N4U5 519 aa21.71■■□□□ 1.07
PIKFYVE-204ENST00000407449 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
PIKFYVE-204ENST00000407449 CPSF1Q10570 1443 aaKnown RBP21.71■■□□□ 1.07
PIKFYVE-204ENST00000407449 PPIP5K1Q6PFW1 1433 aa21.71■■□□□ 1.07
PIKFYVE-204ENST00000407449 MON2Q7Z3U7 1717 aa21.71■■□□□ 1.07
PIKFYVE-204ENST00000407449 TXNDC2Q86VQ3 553 aa21.71■■□□□ 1.07
PIKFYVE-204ENST00000407449 CRBNQ96SW2 442 aa21.71■■□□□ 1.07
PIKFYVE-204ENST00000407449 SLIT1O75093 1534 aa21.7■■□□□ 1.06
PIKFYVE-204ENST00000407449 CCDC27Q2M243 656 aa21.7■■□□□ 1.06
PIKFYVE-204ENST00000407449 EDC4Q6P2E9 1401 aaKnown RBP21.7■■□□□ 1.06
PIKFYVE-204ENST00000407449 ITSN1Q15811 1721 aa21.69■■□□□ 1.06
PIKFYVE-204ENST00000407449 AKAP12Q02952 1782 aa21.69■■□□□ 1.06
PIKFYVE-204ENST00000407449 DMRT2Q9Y5R5 561 aa21.69■■□□□ 1.06
PIKFYVE-204ENST00000407449 U2AF1L5P0DN76 240 aaPredicted RBP21.69■■□□□ 1.06
PIKFYVE-204ENST00000407449 U2AF1Q01081 240 aaKnown RBP eCLIP21.69■■□□□ 1.063e-7■■■□□ 17.8
PIKFYVE-204ENST00000407449 ARHGAP23Q9P227 1491 aa21.68■■□□□ 1.06
PIKFYVE-204ENST00000407449 WDR63Q8IWG1 891 aa21.67■■□□□ 1.06
PIKFYVE-204ENST00000407449 PNPLA6Q8IY17 1366 aa21.67■■□□□ 1.06
PIKFYVE-204ENST00000407449 CEBPAP49715 358 aaPredicted RBP21.65■■□□□ 1.06
PIKFYVE-204ENST00000407449 ROBO2Q9HCK4 1378 aa21.65■■□□□ 1.06
PIKFYVE-204ENST00000407449 C20orf194Q5TEA3 1177 aa21.64■■□□□ 1.06
PIKFYVE-204ENST00000407449 RRP7AQ9Y3A4 280 aaKnown RBP21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms