RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 SNRKQ9NRH2 765 aa12.93□□□□□ -0.34
PTPN12-202ENST00000407343 TMEM259Q4ZIN3 620 aa12.92□□□□□ -0.34
PTPN12-202ENST00000407343 CFAP99D6REC4 459 aa12.91□□□□□ -0.34
PTPN12-202ENST00000407343 BLOC1S3Q6QNY0 202 aa12.91□□□□□ -0.34
PTPN12-202ENST00000407343 SPDYE5A6NIY4 337 aa12.9□□□□□ -0.34
PTPN12-202ENST00000407343 RNF19BQ6ZMZ0 732 aa12.9□□□□□ -0.34
PTPN12-202ENST00000407343 THAP11Q96EK4 314 aa12.9□□□□□ -0.34
PTPN12-202ENST00000407343 NUTM2BA6NNL0 878 aaPredicted RBP12.89□□□□□ -0.35
PTPN12-202ENST00000407343 NUTM2EB1AL46 878 aaPredicted RBP12.89□□□□□ -0.35
PTPN12-202ENST00000407343 NUTM2DQ5VT03 806 aaPredicted RBP12.89□□□□□ -0.35
PTPN12-202ENST00000407343 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
PTPN12-202ENST00000407343 MTMR14Q8NCE2 650 aa12.89□□□□□ -0.35
PTPN12-202ENST00000407343 PCDHB3Q9Y5E6 796 aa12.89□□□□□ -0.35
PTPN12-202ENST00000407343 BRICD5Q6PL45 260 aa12.88□□□□□ -0.35
PTPN12-202ENST00000407343 C6orf229H3BNL8 230 aa12.87□□□□□ -0.35
PTPN12-202ENST00000407343 SCUBE3Q8IX30 993 aa12.87□□□□□ -0.35
PTPN12-202ENST00000407343 ZMYND15Q9H091 742 aa12.87□□□□□ -0.35
PTPN12-202ENST00000407343 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
PTPN12-202ENST00000407343 USP17L8P0C7I0 530 aa12.86□□□□□ -0.35
PTPN12-202ENST00000407343 MYT1LQ9UL68 1186 aa12.86□□□□□ -0.35
PTPN12-202ENST00000407343 SOCS7O14512 581 aa12.85□□□□□ -0.35
PTPN12-202ENST00000407343 AP1G2O75843 785 aa12.85□□□□□ -0.35
PTPN12-202ENST00000407343 RETREG3Q86VR2 466 aa12.85□□□□□ -0.35
PTPN12-202ENST00000407343 CTDSPL2Q05D32 466 aa12.84□□□□□ -0.35
PTPN12-202ENST00000407343 Q3C1V9 767 aa12.84□□□□□ -0.35
PTPN12-202ENST00000407343 NYAP1Q6ZVC0 841 aa12.84□□□□□ -0.35
PTPN12-202ENST00000407343 PRR7Q8TB68 274 aa12.83□□□□□ -0.36
PTPN12-202ENST00000407343 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
PTPN12-202ENST00000407343 POM121Q96HA1 1249 aa12.83□□□□□ -0.36
PTPN12-202ENST00000407343 PCDH10Q9P2E7 1040 aa12.83□□□□□ -0.36
PTPN12-202ENST00000407343 PTPN5P54829 565 aa12.82□□□□□ -0.36
PTPN12-202ENST00000407343 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
PTPN12-202ENST00000407343 NR1I2O75469 434 aa12.81□□□□□ -0.36
PTPN12-202ENST00000407343 GJD4Q96KN9 370 aaPredicted RBP12.81□□□□□ -0.36
PTPN12-202ENST00000407343 HMX1Q9NP08 348 aaPredicted RBP12.81□□□□□ -0.36
PTPN12-202ENST00000407343 A6NJR5 290 aa12.8□□□□□ -0.36
PTPN12-202ENST00000407343 COPS2P61201 443 aa12.8□□□□□ -0.36
PTPN12-202ENST00000407343 USB1Q9BQ65 265 aaKnown RBP12.8□□□□□ -0.36
PTPN12-202ENST00000407343 COG6Q9Y2V7 657 aa12.8□□□□□ -0.36
PTPN12-202ENST00000407343 PER1O15534 1290 aaPredicted RBP12.79□□□□□ -0.36
PTPN12-202ENST00000407343 GPR37L1O60883 481 aa12.79□□□□□ -0.36
PTPN12-202ENST00000407343 UBTFP17480 764 aaKnown RBP12.79□□□□□ -0.36
PTPN12-202ENST00000407343 TJAP1Q5JTD0 557 aa12.79□□□□□ -0.36
PTPN12-202ENST00000407343 DESI1Q6ICB0 168 aa12.79□□□□□ -0.36
PTPN12-202ENST00000407343 LRRN4Q8WUT4 740 aa12.79□□□□□ -0.36
PTPN12-202ENST00000407343 MTRQ99707 1265 aa12.79□□□□□ -0.36
PTPN12-202ENST00000407343 FAM160A2Q8N612 972 aaPredicted RBP12.78□□□□□ -0.36
PTPN12-202ENST00000407343 TRIM34Q9BYJ4 488 aa12.78□□□□□ -0.36
PTPN12-202ENST00000407343 FMNL1O95466 1100 aaPredicted RBP12.77□□□□□ -0.37
PTPN12-202ENST00000407343 FNBP4Q8N3X1 1017 aaPredicted RBP12.77□□□□□ -0.37
PTPN12-202ENST00000407343 HELBQ8NG08 1087 aaPredicted RBP12.77□□□□□ -0.37
PTPN12-202ENST00000407343 TLL1O43897 1013 aa12.76□□□□□ -0.37
PTPN12-202ENST00000407343 ZPR1O75312 459 aa12.75□□□□□ -0.37
PTPN12-202ENST00000407343 ZNF516Q92618 1163 aa12.75□□□□□ -0.37
PTPN12-202ENST00000407343 MSS51Q4VC12 460 aa12.74□□□□□ -0.37
PTPN12-202ENST00000407343 LYPD8Q6UX82 237 aa12.73□□□□□ -0.37
PTPN12-202ENST00000407343 EPS8L1Q8TE68 723 aa12.73□□□□□ -0.37
PTPN12-202ENST00000407343 TSC1Q92574 1164 aa12.73□□□□□ -0.37
PTPN12-202ENST00000407343 RNF166Q96A37 237 aaPredicted RBP12.72□□□□□ -0.37
PTPN12-202ENST00000407343 SPSB2Q99619 263 aa12.72□□□□□ -0.37
PTPN12-202ENST00000407343 PRDM9Q9NQV7 894 aa12.72□□□□□ -0.37
PTPN12-202ENST00000407343 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.37
PTPN12-202ENST00000407343 DXOO77932 396 aaKnown RBP12.71□□□□□ -0.37
PTPN12-202ENST00000407343 JUNDP17535 347 aa12.71□□□□□ -0.37
PTPN12-202ENST00000407343 GDPD2Q9HCC8 539 aa12.71□□□□□ -0.37
PTPN12-202ENST00000407343 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.37
PTPN12-202ENST00000407343 MMP16P51512 607 aa12.7□□□□□ -0.38
PTPN12-202ENST00000407343 IL21Q9HBE4 155 aa12.7□□□□□ -0.38
PTPN12-202ENST00000407343 TRAK2O60296 914 aa12.69□□□□□ -0.38
PTPN12-202ENST00000407343 ADH1BP00325 375 aa12.69□□□□□ -0.38
PTPN12-202ENST00000407343 F12P00748 615 aaPredicted RBP12.69□□□□□ -0.38
PTPN12-202ENST00000407343 PROSER2Q86WR7 435 aaPredicted RBP12.69□□□□□ -0.38
PTPN12-202ENST00000407343 C1orf115Q9H7X2 142 aa12.69□□□□□ -0.38
PTPN12-202ENST00000407343 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
PTPN12-202ENST00000407343 IRF5Q13568 498 aa12.66□□□□□ -0.38
PTPN12-202ENST00000407343 NR6A1Q15406 480 aa12.66□□□□□ -0.38
PTPN12-202ENST00000407343 PTPRNQ16849 979 aa12.66□□□□□ -0.38
PTPN12-202ENST00000407343 HCSTQ9UBK5 93 aa12.66□□□□□ -0.38
PTPN12-202ENST00000407343 RAD21O60216 631 aa12.64□□□□□ -0.39
PTPN12-202ENST00000407343 ITGBL1O95965 494 aaPredicted RBP12.64□□□□□ -0.39
PTPN12-202ENST00000407343 NDUFB9Q9Y6M9 179 aa12.64□□□□□ -0.39
PTPN12-202ENST00000407343 MAP10Q9P2G4 905 aa12.63□□□□□ -0.39
PTPN12-202ENST00000407343 APBB1O00213 710 aa12.62□□□□□ -0.39
PTPN12-202ENST00000407343 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
PTPN12-202ENST00000407343 ABL2P42684 1182 aa12.6□□□□□ -0.39
PTPN12-202ENST00000407343 ARID3CA6NKF2 412 aa12.59□□□□□ -0.39
PTPN12-202ENST00000407343 SLC6A16Q9GZN6 736 aa12.59□□□□□ -0.39
PTPN12-202ENST00000407343 EVA1BQ9NVM1 165 aa12.59□□□□□ -0.39
PTPN12-202ENST00000407343 CCNYL3P0C7X3 344 aa12.58□□□□□ -0.4
PTPN12-202ENST00000407343 NUDT12Q9BQG2 462 aa12.58□□□□□ -0.4
PTPN12-202ENST00000407343 S1PR4O95977 384 aa12.57□□□□□ -0.4
PTPN12-202ENST00000407343 POM121CA8CG34 1229 aa12.55□□□□□ -0.4
PTPN12-202ENST00000407343 KCNH2Q12809 1159 aa12.55□□□□□ -0.4
PTPN12-202ENST00000407343 PTCRAQ6ISU1 281 aaPredicted RBP12.55□□□□□ -0.4
PTPN12-202ENST00000407343 PRM3Q9NNZ6 103 aa12.55□□□□□ -0.4
PTPN12-202ENST00000407343 ZNF777Q9ULD5 760 aaPredicted RBP12.54□□□□□ -0.4
PTPN12-202ENST00000407343 KCNC4Q03721 635 aa12.53□□□□□ -0.4
PTPN12-202ENST00000407343 ZNF330Q9Y3S2 320 aaPredicted RBP12.53□□□□□ -0.4
PTPN12-202ENST00000407343 PLSCR2Q9NRY7 297 aa12.52□□□□□ -0.41
PTPN12-202ENST00000407343 FKBPLQ9UIM3 349 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms