RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 FAM184AQ8NB25 1140 aa15.65■□□□□ 0.1
ERBB2-202ENST00000406381 CCDC34Q96HJ3 373 aa15.65■□□□□ 0.1
ERBB2-202ENST00000406381 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
ERBB2-202ENST00000406381 XRCC6P12956 609 aaKnown RBP eCLIP15.65■□□□□ 0.1
ERBB2-202ENST00000406381 HDGFP51858 240 aaKnown RBP15.65■□□□□ 0.1
ERBB2-202ENST00000406381 NUTM2DQ5VT03 806 aaPredicted RBP15.65■□□□□ 0.1
ERBB2-202ENST00000406381 SASS6Q6UVJ0 657 aa15.65■□□□□ 0.1
ERBB2-202ENST00000406381 ATF7IPQ6VMQ6 1270 aa15.65■□□□□ 0.1
ERBB2-202ENST00000406381 BICD2Q8TD16 824 aa15.65■□□□□ 0.1
ERBB2-202ENST00000406381 PLEKHH2Q8IVE3 1493 aa15.65■□□□□ 0.1
ERBB2-202ENST00000406381 DUSP27Q5VZP5 1158 aa15.64■□□□□ 0.09
ERBB2-202ENST00000406381 HOMER1Q86YM7 354 aa15.63■□□□□ 0.09
ERBB2-202ENST00000406381 CCAR2Q8N163 923 aaKnown RBP15.63■□□□□ 0.09
ERBB2-202ENST00000406381 CHD1LQ86WJ1 897 aa15.63■□□□□ 0.09
ERBB2-202ENST00000406381 NOB1Q9ULX3 412 aaKnown RBP15.63■□□□□ 0.09
ERBB2-202ENST00000406381 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
ERBB2-202ENST00000406381 ARGLU1Q9NWB6 273 aaPredicted RBP15.62■□□□□ 0.09
ERBB2-202ENST00000406381 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
ERBB2-202ENST00000406381 TSR2Q969E8 191 aaKnown RBP15.62■□□□□ 0.09
ERBB2-202ENST00000406381 TBC1D32Q96NH3 1257 aa15.62■□□□□ 0.09
ERBB2-202ENST00000406381 ERBINQ96RT1 1412 aa15.61■□□□□ 0.09
ERBB2-202ENST00000406381 LRPPRCP42704 1394 aaKnown RBP15.61■□□□□ 0.09
ERBB2-202ENST00000406381 TNPO1Q92973 898 aaKnown RBP15.61■□□□□ 0.09
ERBB2-202ENST00000406381 CHMP4CQ96CF2 233 aa15.61■□□□□ 0.09
ERBB2-202ENST00000406381 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.61■□□□□ 0.09
ERBB2-202ENST00000406381 MPNDQ8N594 471 aa15.6■□□□□ 0.09
ERBB2-202ENST00000406381 TRIM5Q9C035 493 aa15.6■□□□□ 0.09
ERBB2-202ENST00000406381 C8orf34Q49A92 452 aa15.6■□□□□ 0.09
ERBB2-202ENST00000406381 LMOD2Q6P5Q4 547 aa15.6■□□□□ 0.09
ERBB2-202ENST00000406381 MLECQ14165 292 aa15.6■□□□□ 0.09
ERBB2-202ENST00000406381 TPD52L1Q16890 204 aaPredicted RBP15.6■□□□□ 0.09
ERBB2-202ENST00000406381 SCAPERQ9BY12 1400 aa15.59■□□□□ 0.09
ERBB2-202ENST00000406381 DAPK1P53355 1430 aa15.59■□□□□ 0.09
ERBB2-202ENST00000406381 RARSP54136 660 aaKnown RBP15.58■□□□□ 0.08
ERBB2-202ENST00000406381 PANK2Q9BZ23 570 aa15.58■□□□□ 0.08
ERBB2-202ENST00000406381 C1orf115Q9H7X2 142 aa15.58■□□□□ 0.08
ERBB2-202ENST00000406381 NKTRP30414 1462 aaKnown RBP15.58■□□□□ 0.08
ERBB2-202ENST00000406381 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.08
ERBB2-202ENST00000406381 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.58■□□□□ 0.08
ERBB2-202ENST00000406381 MNS1Q8NEH6 495 aa15.58■□□□□ 0.08
ERBB2-202ENST00000406381 RPRD2Q5VT52 1461 aaKnown RBP15.58■□□□□ 0.08
ERBB2-202ENST00000406381 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.08
ERBB2-202ENST00000406381 IGHDP01880 384 aa15.57■□□□□ 0.08
ERBB2-202ENST00000406381 COG3Q96JB2 828 aa15.57■□□□□ 0.08
ERBB2-202ENST00000406381 NCAPD3P42695 1498 aa15.57■□□□□ 0.08
ERBB2-202ENST00000406381 FIBPO43427 364 aa15.56■□□□□ 0.08
ERBB2-202ENST00000406381 CFAP70Q5T0N1 1121 aa15.56■□□□□ 0.08
ERBB2-202ENST00000406381 RNF20Q5VTR2 975 aa15.56■□□□□ 0.08
ERBB2-202ENST00000406381 WDR33Q9C0J8 1336 aaKnown RBP15.56■□□□□ 0.08
ERBB2-202ENST00000406381 SYCE3A1L190 88 aa15.56■□□□□ 0.08
ERBB2-202ENST00000406381 ERC2O15083 957 aa15.56■□□□□ 0.08
ERBB2-202ENST00000406381 SPC24Q8NBT2 197 aa15.56■□□□□ 0.08
ERBB2-202ENST00000406381 MINK1Q8N4C8 1332 aaPredicted RBP15.55■□□□□ 0.08
ERBB2-202ENST00000406381 CCDC73Q6ZRK6 1079 aa15.55■□□□□ 0.08
ERBB2-202ENST00000406381 PDCL2Q8N4E4 241 aa15.55■□□□□ 0.08
ERBB2-202ENST00000406381 BCL11BQ9C0K0 894 aaPredicted RBP15.55■□□□□ 0.08
ERBB2-202ENST00000406381 CCDC27Q2M243 656 aa15.55■□□□□ 0.08
ERBB2-202ENST00000406381 CCDC112Q8NEF3 446 aa15.55■□□□□ 0.08
ERBB2-202ENST00000406381 SUPT6HQ7KZ85 1726 aaKnown RBP15.54■□□□□ 0.08
ERBB2-202ENST00000406381 HMOX1P09601 288 aa15.54■□□□□ 0.08
ERBB2-202ENST00000406381 MCM5P33992 734 aa15.54■□□□□ 0.08
ERBB2-202ENST00000406381 CCDC192P0DO97 292 aa15.54■□□□□ 0.08
ERBB2-202ENST00000406381 FKBP5Q13451 457 aaPredicted RBP15.54■□□□□ 0.08
ERBB2-202ENST00000406381 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.088e-7■■■■□ 26
ERBB2-202ENST00000406381 SSFA2P28290 1259 aa15.53■□□□□ 0.08
ERBB2-202ENST00000406381 A0A0G2JS52 829 aa15.53■□□□□ 0.08
ERBB2-202ENST00000406381 AMPHP49418 695 aa15.53■□□□□ 0.08
ERBB2-202ENST00000406381 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
ERBB2-202ENST00000406381 SETQ01105 290 aaPredicted RBP15.53■□□□□ 0.08
ERBB2-202ENST00000406381 PRDM10Q9NQV6 1147 aa15.53■□□□□ 0.08
ERBB2-202ENST00000406381 SLC12A5Q9H2X9 1139 aa15.52■□□□□ 0.08
ERBB2-202ENST00000406381 DYNC1I1O14576 645 aa15.52■□□□□ 0.08
ERBB2-202ENST00000406381 KLHL40Q2TBA0 621 aa15.52■□□□□ 0.08
ERBB2-202ENST00000406381 GORABQ5T7V8 394 aa15.52■□□□□ 0.08
ERBB2-202ENST00000406381 PDCP20941 246 aa15.52■□□□□ 0.07
ERBB2-202ENST00000406381 RNF123Q5XPI4 1314 aa15.52■□□□□ 0.07
ERBB2-202ENST00000406381 PTPRGP23470 1445 aa15.51■□□□□ 0.07
ERBB2-202ENST00000406381 IFIT2P09913 472 aaKnown RBP15.51■□□□□ 0.07
ERBB2-202ENST00000406381 TWISTNBQ3B726 338 aaPredicted RBP15.51■□□□□ 0.07
ERBB2-202ENST00000406381 TAF3Q5VWG9 929 aa15.51■□□□□ 0.07
ERBB2-202ENST00000406381 TMEM57Q8N5G2 664 aa15.51■□□□□ 0.07
ERBB2-202ENST00000406381 NOM1Q5C9Z4 860 aaKnown RBP15.51■□□□□ 0.07
ERBB2-202ENST00000406381 PTPN23Q9H3S7 1636 aa15.51■□□□□ 0.07
ERBB2-202ENST00000406381 ZNF428Q96B54 188 aa15.51■□□□□ 0.07
ERBB2-202ENST00000406381 C9orf84Q5VXU9 1444 aa15.51■□□□□ 0.07
ERBB2-202ENST00000406381 HSP90AB4PQ58FF6 505 aa15.51■□□□□ 0.07
ERBB2-202ENST00000406381 NAT10Q9H0A0 1025 aaKnown RBP15.5■□□□□ 0.07
ERBB2-202ENST00000406381 RRAGDQ9NQL2 400 aaPredicted RBP15.5■□□□□ 0.07
ERBB2-202ENST00000406381 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.5■□□□□ 0.07
ERBB2-202ENST00000406381 CBX1P83916 185 aa15.5■□□□□ 0.07
ERBB2-202ENST00000406381 NOC3LQ8WTT2 800 aaKnown RBP15.5■□□□□ 0.07
ERBB2-202ENST00000406381 CWC15Q9P013 229 aaKnown RBP15.5■□□□□ 0.07
ERBB2-202ENST00000406381 TPM1P09493 284 aa15.5■□□□□ 0.07
ERBB2-202ENST00000406381 CREBRFQ8IUR6 639 aa15.5■□□□□ 0.07
ERBB2-202ENST00000406381 PRKAR2BP31323 418 aa15.5■□□□□ 0.07
ERBB2-202ENST00000406381 BAG4O95429 457 aaKnown RBP15.49■□□□□ 0.07
ERBB2-202ENST00000406381 SDF4Q9BRK5 362 aa15.49■□□□□ 0.07
ERBB2-202ENST00000406381 GNAI3P08754 354 aa15.48■□□□□ 0.07
ERBB2-202ENST00000406381 CABP2Q9NPB3 220 aa15.48■□□□□ 0.07
ERBB2-202ENST00000406381 HSP90B2PQ58FF3 399 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms