RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 FNBP4Q8N3X1 1017 aaPredicted RBP31.57■■■□□ 2.64
RHBDD3-202ENST00000406335 STK26Q9P289 416 aa31.57■■■□□ 2.64
RHBDD3-202ENST00000406335 NUTM2FA1L443 756 aa31.55■■■□□ 2.64
RHBDD3-202ENST00000406335 XPCQ01831 940 aaPredicted RBP31.55■■■□□ 2.64
RHBDD3-202ENST00000406335 FOXO3O43524 673 aa31.54■■■□□ 2.64
RHBDD3-202ENST00000406335 RGL3Q3MIN7 710 aa31.53■■■□□ 2.64
RHBDD3-202ENST00000406335 LRPPRCP42704 1394 aaKnown RBP31.49■■■□□ 2.63
RHBDD3-202ENST00000406335 ZRANB1Q9UGI0 708 aa31.49■■■□□ 2.63
RHBDD3-202ENST00000406335 WAPLQ7Z5K2 1190 aa31.48■■■□□ 2.63
RHBDD3-202ENST00000406335 ADGRF5Q8IZF2 1346 aa31.45■■■□□ 2.62
RHBDD3-202ENST00000406335 ATRNO75882 1429 aa31.44■■■□□ 2.62
RHBDD3-202ENST00000406335 LAMC1P11047 1609 aa31.43■■■□□ 2.62
RHBDD3-202ENST00000406335 PRAG1Q86YV5 1406 aa31.42■■■□□ 2.62
RHBDD3-202ENST00000406335 GJD4Q96KN9 370 aaPredicted RBP31.42■■■□□ 2.62
RHBDD3-202ENST00000406335 HAP1P54257 671 aaPredicted RBP31.41■■■□□ 2.62
RHBDD3-202ENST00000406335 TMEM132EQ6IEE7 984 aa31.41■■■□□ 2.62
RHBDD3-202ENST00000406335 CCDC125Q86Z20 511 aa31.41■■■□□ 2.62
RHBDD3-202ENST00000406335 CCDC144AA2RUR9 1427 aa31.4■■■□□ 2.62
RHBDD3-202ENST00000406335 PLEKHG5O94827 1062 aa31.37■■■□□ 2.61
RHBDD3-202ENST00000406335 MYOM2P54296 1465 aa31.37■■■□□ 2.61
RHBDD3-202ENST00000406335 BCL9LQ86UU0 1499 aa31.35■■■□□ 2.61
RHBDD3-202ENST00000406335 CDC42BPGQ6DT37 1551 aa31.34■■■□□ 2.61
RHBDD3-202ENST00000406335 PXDNQ92626 1479 aa31.34■■■□□ 2.61
RHBDD3-202ENST00000406335 ANKRD30BQ9BXX2 1392 aa31.34■■■□□ 2.61
RHBDD3-202ENST00000406335 KRT28Q7Z3Y7 464 aa31.34■■■□□ 2.61
RHBDD3-202ENST00000406335 UNC5CLQ8IV45 518 aa31.34■■■□□ 2.61
RHBDD3-202ENST00000406335 COL22A1Q8NFW1 1626 aaPredicted RBP31.34■■■□□ 2.61
RHBDD3-202ENST00000406335 PPLO60437 1756 aa31.33■■■□□ 2.61
RHBDD3-202ENST00000406335 MPHOSPH9Q99550 1183 aa31.32■■■□□ 2.6
RHBDD3-202ENST00000406335 ABCC11Q96J66 1382 aa31.3■■■□□ 2.6
RHBDD3-202ENST00000406335 PLEKHH1Q9ULM0 1364 aa31.3■■■□□ 2.6
RHBDD3-202ENST00000406335 PSME1Q06323 249 aa31.3■■■□□ 2.6
RHBDD3-202ENST00000406335 LMOD2Q6P5Q4 547 aa31.3■■■□□ 2.6
RHBDD3-202ENST00000406335 SPATA31A3Q5VYP0 1347 aa31.29■■■□□ 2.6
RHBDD3-202ENST00000406335 CCDC9Q9Y3X0 531 aaKnown RBP31.29■■■□□ 2.6
RHBDD3-202ENST00000406335 SF3B2Q13435 895 aaKnown RBP31.28■■■□□ 2.6
RHBDD3-202ENST00000406335 TECPR2O15040 1411 aa31.25■■■□□ 2.59
RHBDD3-202ENST00000406335 PHF8Q9UPP1 1060 aa31.24■■■□□ 2.59
RHBDD3-202ENST00000406335 SAFB2Q14151 953 aaKnown RBP eCLIP31.22■■■□□ 2.59
RHBDD3-202ENST00000406335 CABLES1Q8TDN4 633 aa31.22■■■□□ 2.59
RHBDD3-202ENST00000406335 YTHDC2Q9H6S0 1430 aaKnown RBP31.22■■■□□ 2.59
RHBDD3-202ENST00000406335 SPATA31E1Q6ZUB1 1445 aa31.21■■■□□ 2.59
RHBDD3-202ENST00000406335 SIRT1Q96EB6 747 aa31.2■■■□□ 2.59
RHBDD3-202ENST00000406335 RALGAPBQ86X10 1494 aa31.2■■■□□ 2.58
RHBDD3-202ENST00000406335 SEPT12Q8IYM1 358 aa31.19■■■□□ 2.58
RHBDD3-202ENST00000406335 DHX57Q6P158 1386 aaKnown RBP31.18■■■□□ 2.58
RHBDD3-202ENST00000406335 A0A0G2JS52 829 aa31.18■■■□□ 2.58
RHBDD3-202ENST00000406335 MYT1Q01538 1121 aa31.18■■■□□ 2.58
RHBDD3-202ENST00000406335 POGKQ9P215 609 aa31.18■■■□□ 2.58
RHBDD3-202ENST00000406335 PIK3C2GO75747 1445 aa31.17■■■□□ 2.58
RHBDD3-202ENST00000406335 C14orf93Q9H972 538 aaKnown RBP31.17■■■□□ 2.58
RHBDD3-202ENST00000406335 BLMP54132 1417 aaPredicted RBP31.16■■■□□ 2.58
RHBDD3-202ENST00000406335 SLIT2O94813 1529 aa31.16■■■□□ 2.58
RHBDD3-202ENST00000406335 CFAP70Q5T0N1 1121 aa31.16■■■□□ 2.58
RHBDD3-202ENST00000406335 VPS72Q15906 364 aa31.15■■■□□ 2.58
RHBDD3-202ENST00000406335 DEFB132Q7Z7B7 95 aa31.15■■■□□ 2.58
RHBDD3-202ENST00000406335 PRAM1Q96QH2 718 aa31.15■■■□□ 2.58
RHBDD3-202ENST00000406335 PMFBP1Q8TBY8 1022 aa31.13■■■□□ 2.57
RHBDD3-202ENST00000406335 MARF1Q9Y4F3 1742 aaKnown RBP31.12■■■□□ 2.57
RHBDD3-202ENST00000406335 TNS3Q68CZ2 1445 aa31.12■■■□□ 2.57
RHBDD3-202ENST00000406335 KIF1AQ12756 1690 aa31.1■■■□□ 2.57
RHBDD3-202ENST00000406335 KRT27Q7Z3Y8 459 aa31.1■■■□□ 2.57
RHBDD3-202ENST00000406335 SRCAPQ6ZRS2 3230 aa31.09■■■□□ 2.57
RHBDD3-202ENST00000406335 FMN2Q9NZ56 1722 aa31.09■■■□□ 2.57
RHBDD3-202ENST00000406335 ARHGEF10O15013 1369 aa31.08■■■□□ 2.57
RHBDD3-202ENST00000406335 GLI3P10071 1580 aa31.08■■■□□ 2.57
RHBDD3-202ENST00000406335 SBNO1A3KN83 1393 aa31.07■■■□□ 2.56
RHBDD3-202ENST00000406335 ACIN1Q9UKV3 1341 aaKnown RBP31.06■■■□□ 2.56
RHBDD3-202ENST00000406335 KNDC1Q76NI1 1749 aa31.06■■■□□ 2.56
RHBDD3-202ENST00000406335 USP32Q8NFA0 1604 aa31.06■■■□□ 2.56
RHBDD3-202ENST00000406335 FAM83GA6ND36 823 aa31.05■■■□□ 2.56
RHBDD3-202ENST00000406335 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.04■■■□□ 2.56
RHBDD3-202ENST00000406335 EP400Q96L91 3159 aa31.02■■■□□ 2.56
RHBDD3-202ENST00000406335 ONECUT3O60422 494 aaPredicted RBP31.02■■■□□ 2.56
RHBDD3-202ENST00000406335 HIRIP3Q9BW71 556 aaPredicted RBP31.02■■■□□ 2.56
RHBDD3-202ENST00000406335 IFT172Q9UG01 1749 aa31.01■■■□□ 2.56
RHBDD3-202ENST00000406335 TRAK1Q9UPV9 953 aa31.01■■■□□ 2.55
RHBDD3-202ENST00000406335 NRXN1Q9ULB1 1477 aa31.01■■■□□ 2.55
RHBDD3-202ENST00000406335 BAG6P46379 1132 aa31■■■□□ 2.55
RHBDD3-202ENST00000406335 FAM98CQ17RN3 349 aaKnown RBP31■■■□□ 2.55
RHBDD3-202ENST00000406335 BTG4Q9NY30 223 aa31■■■□□ 2.55
RHBDD3-202ENST00000406335 GPRASP1Q5JY77 1395 aa30.99■■■□□ 2.55
RHBDD3-202ENST00000406335 RAB3GAP2Q9H2M9 1393 aa30.96■■■□□ 2.55
RHBDD3-202ENST00000406335 PAK3O75914 559 aaPredicted RBP30.96■■■□□ 2.55
RHBDD3-202ENST00000406335 KDM2AQ9Y2K7 1162 aa30.96■■■□□ 2.55
RHBDD3-202ENST00000406335 MINK1Q8N4C8 1332 aaPredicted RBP30.96■■■□□ 2.55
RHBDD3-202ENST00000406335 ANKARQ7Z5J8 1434 aa30.94■■■□□ 2.54
RHBDD3-202ENST00000406335 NGDNQ8NEJ9 315 aaKnown RBP30.94■■■□□ 2.54
RHBDD3-202ENST00000406335 PSDA5PKW4 1024 aaPredicted RBP30.93■■■□□ 2.54
RHBDD3-202ENST00000406335 EIF3AQ14152 1382 aaKnown RBP30.91■■■□□ 2.54
RHBDD3-202ENST00000406335 RGPD8O14715 1765 aaPredicted RBP30.9■■■□□ 2.54
RHBDD3-202ENST00000406335 DCAF11Q8TEB1 546 aa30.88■■■□□ 2.53
RHBDD3-202ENST00000406335 BRWD3Q6RI45 1802 aa30.88■■■□□ 2.53
RHBDD3-202ENST00000406335 PLCH1Q4KWH8 1693 aa30.87■■■□□ 2.53
RHBDD3-202ENST00000406335 WASLO00401 505 aaPredicted RBP30.87■■■□□ 2.53
RHBDD3-202ENST00000406335 EN1Q05925 392 aaPredicted RBP30.86■■■□□ 2.53
RHBDD3-202ENST00000406335 FAM182BQ5T319 152 aa30.86■■■□□ 2.53
RHBDD3-202ENST00000406335 PRDM11Q9NQV5 511 aa30.86■■■□□ 2.53
RHBDD3-202ENST00000406335 NWD2Q9ULI1 1742 aa30.86■■■□□ 2.53
RHBDD3-202ENST00000406335 DLC1Q96QB1 1528 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms