RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 FAM43AQ8N2R8 423 aa19.25■□□□□ 0.67
ATG4B-206ENST00000405546 C14orf93Q9H972 538 aaKnown RBP19.25■□□□□ 0.67
ATG4B-206ENST00000405546 MADDQ8WXG6 1647 aa19.24■□□□□ 0.67
ATG4B-206ENST00000405546 ZNF521Q96K83 1311 aa19.24■□□□□ 0.67
ATG4B-206ENST00000405546 RUNDC1Q96C34 613 aa19.24■□□□□ 0.67
ATG4B-206ENST00000405546 SEC24BO95487 1268 aa19.23■□□□□ 0.67
ATG4B-206ENST00000405546 EVC2Q86UK5 1308 aa19.23■□□□□ 0.67
ATG4B-206ENST00000405546 IDI1Q13907 227 aa19.22■□□□□ 0.67
ATG4B-206ENST00000405546 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
ATG4B-206ENST00000405546 PIK3C2GO75747 1445 aa19.21■□□□□ 0.67
ATG4B-206ENST00000405546 ERVK-7P63135 1459 aa19.21■□□□□ 0.67
ATG4B-206ENST00000405546 IGHDP01880 384 aa19.2■□□□□ 0.66
ATG4B-206ENST00000405546 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
ATG4B-206ENST00000405546 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
ATG4B-206ENST00000405546 PANK2Q9BZ23 570 aa19.2■□□□□ 0.66
ATG4B-206ENST00000405546 NKTRP30414 1462 aaKnown RBP19.19■□□□□ 0.66
ATG4B-206ENST00000405546 SPHKAPQ2M3C7 1700 aa19.18■□□□□ 0.66
ATG4B-206ENST00000405546 FTSJ3Q8IY81 847 aaKnown RBP19.18■□□□□ 0.66
ATG4B-206ENST00000405546 TSR2Q969E8 191 aaKnown RBP19.18■□□□□ 0.66
ATG4B-206ENST00000405546 LAMC1P11047 1609 aa19.18■□□□□ 0.66
ATG4B-206ENST00000405546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.17■□□□□ 0.661e-8■□□□□ 9.2
ATG4B-206ENST00000405546 KDM2BQ8NHM5 1336 aa19.17■□□□□ 0.66
ATG4B-206ENST00000405546 MAPK8IP3Q9UPT6 1336 aa19.16■□□□□ 0.66
ATG4B-206ENST00000405546 INSRP06213 1382 aa19.16■□□□□ 0.66
ATG4B-206ENST00000405546 FBXO31Q5XUX0 539 aaPredicted RBP19.16■□□□□ 0.66
ATG4B-206ENST00000405546 ZNF518AQ6AHZ1 1483 aa19.16■□□□□ 0.66
ATG4B-206ENST00000405546 NPATQ14207 1427 aa19.15■□□□□ 0.66
ATG4B-206ENST00000405546 PRAM1Q96QH2 718 aa19.15■□□□□ 0.66
ATG4B-206ENST00000405546 ZMYND15Q9H091 742 aa19.15■□□□□ 0.66
ATG4B-206ENST00000405546 NPC1L1Q9UHC9 1359 aa19.15■□□□□ 0.66
ATG4B-206ENST00000405546 FBLN1P23142 703 aa19.14■□□□□ 0.65
ATG4B-206ENST00000405546 TRMT2AQ8IZ69 625 aaKnown RBP19.14■□□□□ 0.65
ATG4B-206ENST00000405546 TET3O43151 1660 aa19.14■□□□□ 0.65
ATG4B-206ENST00000405546 SYNMO15061 1565 aa19.14■□□□□ 0.65
ATG4B-206ENST00000405546 RARSP54136 660 aaKnown RBP19.13■□□□□ 0.65
ATG4B-206ENST00000405546 PLPPR3Q6T4P5 718 aa19.12■□□□□ 0.65
ATG4B-206ENST00000405546 MYH16Q9H6N6 1097 aa19.12■□□□□ 0.65
ATG4B-206ENST00000405546 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
ATG4B-206ENST00000405546 RNF17Q9BXT8 1623 aaKnown RBP19.11■□□□□ 0.65
ATG4B-206ENST00000405546 PDE3AQ14432 1141 aa19.11■□□□□ 0.65
ATG4B-206ENST00000405546 PNNQ9H307 717 aaKnown RBP19.11■□□□□ 0.65
ATG4B-206ENST00000405546 RLBP1P12271 317 aa19.1■□□□□ 0.65
ATG4B-206ENST00000405546 IQGAP1P46940 1657 aa19.1■□□□□ 0.65
ATG4B-206ENST00000405546 RPGRIP1LQ68CZ1 1315 aa19.1■□□□□ 0.65
ATG4B-206ENST00000405546 KDM5AP29375 1690 aaKnown RBP19.1■□□□□ 0.65
ATG4B-206ENST00000405546 NGEFQ8N5V2 710 aa19.1■□□□□ 0.65
ATG4B-206ENST00000405546 TERF2IPQ9NYB0 399 aa19.1■□□□□ 0.65
ATG4B-206ENST00000405546 POLR3AO14802 1390 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-206ENST00000405546 CEP152O94986 1710 aa19.08■□□□□ 0.65
ATG4B-206ENST00000405546 HSP90AA2PQ14568 343 aaPredicted RBP19.08■□□□□ 0.64
ATG4B-206ENST00000405546 CABP1Q9NZU7 370 aa19.08■□□□□ 0.64
ATG4B-206ENST00000405546 MAP3K4Q9Y6R4 1608 aa19.08■□□□□ 0.64
ATG4B-206ENST00000405546 EXOSC9Q06265 439 aaKnown RBP19.08■□□□□ 0.64
ATG4B-206ENST00000405546 ITPRIPQ8IWB1 547 aa19.08■□□□□ 0.64
ATG4B-206ENST00000405546 HDGFL2Q7Z4V5 671 aaPredicted RBP19.07■□□□□ 0.64
ATG4B-206ENST00000405546 XRCC6P12956 609 aaKnown RBP eCLIP19.07■□□□□ 0.64
ATG4B-206ENST00000405546 RIPK4P57078 832 aa19.07■□□□□ 0.64
ATG4B-206ENST00000405546 ABCA6Q8N139 1617 aa19.07■□□□□ 0.64
ATG4B-206ENST00000405546 ARAP3Q8WWN8 1544 aa19.06■□□□□ 0.64
ATG4B-206ENST00000405546 PCDHB15Q9Y5E8 787 aa19.06■□□□□ 0.64
ATG4B-206ENST00000405546 FAM69CQ0P6D2 419 aa19.06■□□□□ 0.64
ATG4B-206ENST00000405546 UPF2Q9HAU5 1272 aaKnown RBP19.06■□□□□ 0.64
ATG4B-206ENST00000405546 GLIPR1L2Q4G1C9 344 aa19.05■□□□□ 0.64
ATG4B-206ENST00000405546 WAPLQ7Z5K2 1190 aa19.05■□□□□ 0.64
ATG4B-206ENST00000405546 WDR63Q8IWG1 891 aa19.05■□□□□ 0.64
ATG4B-206ENST00000405546 EFCAB6Q5THR3 1501 aa19.05■□□□□ 0.64
ATG4B-206ENST00000405546 MYOM2P54296 1465 aa19.05■□□□□ 0.64
ATG4B-206ENST00000405546 ELL2O00472 640 aaPredicted RBP19.05■□□□□ 0.64
ATG4B-206ENST00000405546 INO80Q9ULG1 1556 aaPredicted RBP19.05■□□□□ 0.64
ATG4B-206ENST00000405546 KIF1BO60333 1816 aa19.05■□□□□ 0.64
ATG4B-206ENST00000405546 PMFBP1Q8TBY8 1022 aa19.05■□□□□ 0.64
ATG4B-206ENST00000405546 CDK19Q9BWU1 502 aa19.05■□□□□ 0.64
ATG4B-206ENST00000405546 ESF1Q9H501 851 aaKnown RBP19.05■□□□□ 0.64
ATG4B-206ENST00000405546 HSP90AA1P07900 732 aaKnown RBP19.04■□□□□ 0.64
ATG4B-206ENST00000405546 SLC52A1Q9NWF4 448 aa19.04■□□□□ 0.64
ATG4B-206ENST00000405546 HMOX1P09601 288 aa19.03■□□□□ 0.64
ATG4B-206ENST00000405546 ZKSCAN2Q63HK3 967 aa19.03■□□□□ 0.64
ATG4B-206ENST00000405546 RWDD1Q9H446 243 aaPredicted RBP19.03■□□□□ 0.64
ATG4B-206ENST00000405546 ARID3AQ99856 593 aa19.03■□□□□ 0.64
ATG4B-206ENST00000405546 ABCA9Q8IUA7 1624 aa19.03■□□□□ 0.64
ATG4B-206ENST00000405546 USP19O94966 1318 aa19.03■□□□□ 0.64
ATG4B-206ENST00000405546 POGZQ7Z3K3 1410 aa19.03■□□□□ 0.64
ATG4B-206ENST00000405546 GOLGA6L3A6NEY3 463 aa19.03■□□□□ 0.64
ATG4B-206ENST00000405546 DIAPH1O60610 1272 aaKnown RBP19.02■□□□□ 0.64
ATG4B-206ENST00000405546 BECN1Q14457 450 aa19.02■□□□□ 0.64
ATG4B-206ENST00000405546 DZIP1LQ8IYY4 767 aaKnown RBP19.02■□□□□ 0.64
ATG4B-206ENST00000405546 PDZRN3Q9UPQ7 1066 aa19.02■□□□□ 0.64
ATG4B-206ENST00000405546 NUTM2FA1L443 756 aa19.02■□□□□ 0.64
ATG4B-206ENST00000405546 FYB1O15117 783 aa19.02■□□□□ 0.64
ATG4B-206ENST00000405546 TMPOP42166 694 aaKnown RBP19.01■□□□□ 0.63
ATG4B-206ENST00000405546 PPRC1Q5VV67 1664 aaKnown RBP19.01■□□□□ 0.63
ATG4B-206ENST00000405546 SBNO2Q9Y2G9 1366 aa19■□□□□ 0.63
ATG4B-206ENST00000405546 KIDINS220Q9ULH0 1771 aa19■□□□□ 0.63
ATG4B-206ENST00000405546 SOX12O15370 315 aa19■□□□□ 0.63
ATG4B-206ENST00000405546 L1TD1Q5T7N2 865 aaKnown RBP18.99■□□□□ 0.63
ATG4B-206ENST00000405546 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
ATG4B-206ENST00000405546 ANKRD36BQ8N2N9 1353 aa18.99■□□□□ 0.63
ATG4B-206ENST00000405546 A0A1W2PP64 1363 aa18.99■□□□□ 0.63
ATG4B-206ENST00000405546 THUMPD2Q9BTF0 503 aaKnown RBP18.98■□□□□ 0.63
ATG4B-206ENST00000405546 VWDEQ8N2E2 1590 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms