RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 MARF1Q9Y4F3 1742 aaKnown RBP8.74□□□□□ -1.01
CEACAM1-207ENST00000403444 LMTK3Q96Q04 1460 aa8.74□□□□□ -1.01
CEACAM1-207ENST00000403444 AKAP12Q02952 1782 aa8.74□□□□□ -1.01
CEACAM1-207ENST00000403444 NBPF8Q3BBV2 869 aa8.74□□□□□ -1.01
CEACAM1-207ENST00000403444 NALCNQ8IZF0 1738 aa8.73□□□□□ -1.01
CEACAM1-207ENST00000403444 ANKRD26Q9UPS8 1709 aa8.73□□□□□ -1.01
CEACAM1-207ENST00000403444 CC2D1BQ5T0F9 858 aaKnown RBP8.73□□□□□ -1.01
CEACAM1-207ENST00000403444 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.73□□□□□ -1.01
CEACAM1-207ENST00000403444 CCER2I3L3R5 266 aa8.72□□□□□ -1.01
CEACAM1-207ENST00000403444 SKAP1Q86WV1 359 aa8.72□□□□□ -1.01
CEACAM1-207ENST00000403444 DCAF11Q8TEB1 546 aa8.72□□□□□ -1.01
CEACAM1-207ENST00000403444 ADAMTS13Q76LX8 1427 aa8.72□□□□□ -1.01
CEACAM1-207ENST00000403444 PAXIP1Q6ZW49 1069 aaPredicted RBP8.71□□□□□ -1.01
CEACAM1-207ENST00000403444 CARD11Q9BXL7 1154 aa8.71□□□□□ -1.01
CEACAM1-207ENST00000403444 STAC3Q96MF2 364 aa8.71□□□□□ -1.01
CEACAM1-207ENST00000403444 MON2Q7Z3U7 1717 aa8.71□□□□□ -1.02
CEACAM1-207ENST00000403444 FMN2Q9NZ56 1722 aa8.7□□□□□ -1.02
CEACAM1-207ENST00000403444 RPGRIP1LQ68CZ1 1315 aa8.7□□□□□ -1.02
CEACAM1-207ENST00000403444 PRKRIP1Q9H875 184 aaPredicted RBP8.7□□□□□ -1.02
CEACAM1-207ENST00000403444 LAS1LQ9Y4W2 734 aaKnown RBP8.7□□□□□ -1.02
CEACAM1-207ENST00000403444 RSPH6AQ9H0K4 717 aa8.7□□□□□ -1.02
CEACAM1-207ENST00000403444 TNRQ92752 1358 aa8.7□□□□□ -1.02
CEACAM1-207ENST00000403444 TULP4Q9NRJ4 1543 aa8.69□□□□□ -1.02
CEACAM1-207ENST00000403444 SBNO2Q9Y2G9 1366 aa8.69□□□□□ -1.02
CEACAM1-207ENST00000403444 DHX37Q8IY37 1157 aaKnown RBP8.68□□□□□ -1.02
CEACAM1-207ENST00000403444 CRYBG1Q9Y4K1 1723 aa8.68□□□□□ -1.02
CEACAM1-207ENST00000403444 PLIN1O60240 522 aa8.68□□□□□ -1.02
CEACAM1-207ENST00000403444 SLC52A1Q9NWF4 448 aa8.68□□□□□ -1.02
CEACAM1-207ENST00000403444 ITSN1Q15811 1721 aa8.68□□□□□ -1.02
CEACAM1-207ENST00000403444 PLEKHG1Q9ULL1 1385 aa8.67□□□□□ -1.02
CEACAM1-207ENST00000403444 TMEM2Q9UHN6 1383 aa8.67□□□□□ -1.02
CEACAM1-207ENST00000403444 PPP4R2Q9NY27 417 aa8.67□□□□□ -1.02
CEACAM1-207ENST00000403444 SCAF11Q99590 1463 aaKnown RBP8.67□□□□□ -1.02
CEACAM1-207ENST00000403444 WASHC2CQ9Y4E1 1318 aa8.67□□□□□ -1.02
CEACAM1-207ENST00000403444 KIF7Q2M1P5 1343 aa8.67□□□□□ -1.02
CEACAM1-207ENST00000403444 PTCH1Q13635 1447 aa8.66□□□□□ -1.02
CEACAM1-207ENST00000403444 RIMS2Q9UQ26 1411 aa8.66□□□□□ -1.02
CEACAM1-207ENST00000403444 ST20-MTHFSA0A0A6YYL1 179 aa8.66□□□□□ -1.02
CEACAM1-207ENST00000403444 CHGAP10645 457 aaKnown RBP8.65□□□□□ -1.02
CEACAM1-207ENST00000403444 CDC42BPGQ6DT37 1551 aa8.65□□□□□ -1.02
CEACAM1-207ENST00000403444 TNNT2P45379 298 aaPredicted RBP8.65□□□□□ -1.03
CEACAM1-207ENST00000403444 KIF20BQ96Q89 1820 aa8.64□□□□□ -1.03
CEACAM1-207ENST00000403444 PAK3O75914 559 aaPredicted RBP8.64□□□□□ -1.03
CEACAM1-207ENST00000403444 ANP32AP39687 249 aaKnown RBP8.64□□□□□ -1.03
CEACAM1-207ENST00000403444 NOP58Q9Y2X3 529 aaKnown RBP8.64□□□□□ -1.03
CEACAM1-207ENST00000403444 PTPRUQ92729 1446 aa8.64□□□□□ -1.03
CEACAM1-207ENST00000403444 LRRC7Q96NW7 1537 aa8.64□□□□□ -1.03
CEACAM1-207ENST00000403444 KDM4FA0A1W2PPD8 638 aa8.64□□□□□ -1.03
CEACAM1-207ENST00000403444 IDI1Q13907 227 aa8.64□□□□□ -1.03
CEACAM1-207ENST00000403444 FBXO31Q5XUX0 539 aaPredicted RBP8.63□□□□□ -1.03
CEACAM1-207ENST00000403444 NEUROD2Q15784 382 aa8.63□□□□□ -1.03
CEACAM1-207ENST00000403444 FAM135BQ49AJ0 1406 aa8.63□□□□□ -1.03
CEACAM1-207ENST00000403444 RGPD8O14715 1765 aaPredicted RBP8.63□□□□□ -1.03
CEACAM1-207ENST00000403444 TRPM3Q9HCF6 1732 aaPredicted RBP8.63□□□□□ -1.03
CEACAM1-207ENST00000403444 TRHP20396 242 aaPredicted RBP8.62□□□□□ -1.03
CEACAM1-207ENST00000403444 BRPF3Q9ULD4 1205 aa8.62□□□□□ -1.03
CEACAM1-207ENST00000403444 SLC4A3P48751 1232 aa8.62□□□□□ -1.03
CEACAM1-207ENST00000403444 PHRF1Q9P1Y6 1649 aaKnown RBP8.61□□□□□ -1.03
CEACAM1-207ENST00000403444 ADGRF5Q8IZF2 1346 aa8.61□□□□□ -1.03
CEACAM1-207ENST00000403444 KCNA4P22459 653 aa8.61□□□□□ -1.03
CEACAM1-207ENST00000403444 GGT6Q6P531 493 aa8.61□□□□□ -1.03
CEACAM1-207ENST00000403444 CDCA7LQ96GN5 454 aa8.61□□□□□ -1.03
CEACAM1-207ENST00000403444 CCDC7Q96M83 1385 aa8.61□□□□□ -1.03
CEACAM1-207ENST00000403444 CD163L1Q9NR16 1453 aa8.61□□□□□ -1.03
CEACAM1-207ENST00000403444 EXOC6Q8TAG9 804 aa8.61□□□□□ -1.03
CEACAM1-207ENST00000403444 C14orf93Q9H972 538 aaKnown RBP8.61□□□□□ -1.03
CEACAM1-207ENST00000403444 PIK3R4Q99570 1358 aa8.61□□□□□ -1.03
CEACAM1-207ENST00000403444 NAP1L5Q96NT1 182 aaPredicted RBP8.6□□□□□ -1.03
CEACAM1-207ENST00000403444 CHMP4AQ9BY43 222 aa8.6□□□□□ -1.03
CEACAM1-207ENST00000403444 ZBTB47Q9UFB7 747 aaPredicted RBP8.6□□□□□ -1.03
CEACAM1-207ENST00000403444 RGS3P49796 1198 aa8.6□□□□□ -1.03
CEACAM1-207ENST00000403444 HSP90AA2PQ14568 343 aaPredicted RBP8.6□□□□□ -1.03
CEACAM1-207ENST00000403444 NKTRP30414 1462 aaKnown RBP8.59□□□□□ -1.03
CEACAM1-207ENST00000403444 TULP1O00294 542 aaPredicted RBP8.59□□□□□ -1.03
CEACAM1-207ENST00000403444 HAP1P54257 671 aaPredicted RBP8.59□□□□□ -1.03
CEACAM1-207ENST00000403444 TESK2Q96S53 571 aa8.59□□□□□ -1.03
CEACAM1-207ENST00000403444 YTHDC2Q9H6S0 1430 aaKnown RBP8.59□□□□□ -1.03
CEACAM1-207ENST00000403444 SHPRHQ149N8 1683 aa8.59□□□□□ -1.03
CEACAM1-207ENST00000403444 NBPF1Q3BBV0 1214 aa8.58□□□□□ -1.04
CEACAM1-207ENST00000403444 NAP1L2Q9ULW6 460 aaPredicted RBP8.58□□□□□ -1.04
CEACAM1-207ENST00000403444 LTBP4Q8N2S1 1624 aa8.58□□□□□ -1.04
CEACAM1-207ENST00000403444 ABCA3Q99758 1704 aa8.58□□□□□ -1.04
CEACAM1-207ENST00000403444 LRPPRCP42704 1394 aaKnown RBP8.58□□□□□ -1.04
CEACAM1-207ENST00000403444 USP47Q96K76 1375 aa8.58□□□□□ -1.04
CEACAM1-207ENST00000403444 CCDC146Q8IYE0 955 aa8.58□□□□□ -1.04
CEACAM1-207ENST00000403444 CHMP4BQ9H444 224 aaKnown RBP8.58□□□□□ -1.04
CEACAM1-207ENST00000403444 ARID4BQ4LE39 1312 aaPredicted RBP8.58□□□□□ -1.04
CEACAM1-207ENST00000403444 SIRT1Q96EB6 747 aa8.57□□□□□ -1.04
CEACAM1-207ENST00000403444 KIF1AQ12756 1690 aa8.57□□□□□ -1.04
CEACAM1-207ENST00000403444 ALS2Q96Q42 1657 aa8.57□□□□□ -1.04
CEACAM1-207ENST00000403444 ABCC11Q96J66 1382 aa8.57□□□□□ -1.04
CEACAM1-207ENST00000403444 MST1RQ04912 1400 aa8.57□□□□□ -1.04
CEACAM1-207ENST00000403444 NHSL1Q5SYE7 1610 aa8.56□□□□□ -1.04
CEACAM1-207ENST00000403444 NUTM2DQ5VT03 806 aaPredicted RBP8.56□□□□□ -1.04
CEACAM1-207ENST00000403444 METP08581 1390 aa8.56□□□□□ -1.04
CEACAM1-207ENST00000403444 BBXQ8WY36 941 aaPredicted RBP8.56□□□□□ -1.04
CEACAM1-207ENST00000403444 CANXP27824 592 aaKnown RBP8.55□□□□□ -1.04
CEACAM1-207ENST00000403444 NUDCQ9Y266 331 aa8.55□□□□□ -1.04
CEACAM1-207ENST00000403444 SAFB2Q14151 953 aaKnown RBP eCLIP8.55□□□□□ -1.04
CEACAM1-207ENST00000403444 ATP7BP35670 1465 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms