RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 NRXN1Q9ULB1 1477 aa25.99■■□□□ 1.75
CCDC47-202ENST00000403162 PPP2R1AP30153 589 aa25.99■■□□□ 1.75
CCDC47-202ENST00000403162 USP35Q9P2H5 1018 aa25.99■■□□□ 1.75
CCDC47-202ENST00000403162 KNSTRNQ9Y448 316 aa25.99■■□□□ 1.75
CCDC47-202ENST00000403162 KDM5AP29375 1690 aaKnown RBP25.98■■□□□ 1.75
CCDC47-202ENST00000403162 RIMS2Q9UQ26 1411 aa25.98■■□□□ 1.75
CCDC47-202ENST00000403162 KDM2BQ8NHM5 1336 aa25.98■■□□□ 1.75
CCDC47-202ENST00000403162 PLEKHH1Q9ULM0 1364 aa25.97■■□□□ 1.75
CCDC47-202ENST00000403162 ZNF521Q96K83 1311 aa25.97■■□□□ 1.75
CCDC47-202ENST00000403162 AMER1Q5JTC6 1135 aaPredicted RBP25.97■■□□□ 1.75
CCDC47-202ENST00000403162 SCAF11Q99590 1463 aaKnown RBP25.96■■□□□ 1.75
CCDC47-202ENST00000403162 CDCA8Q53HL2 280 aa25.96■■□□□ 1.75
CCDC47-202ENST00000403162 PIK3C2GO75747 1445 aa25.96■■□□□ 1.75
CCDC47-202ENST00000403162 ASXL1Q8IXJ9 1541 aa25.96■■□□□ 1.75
CCDC47-202ENST00000403162 DUSP27Q5VZP5 1158 aa25.96■■□□□ 1.75
CCDC47-202ENST00000403162 ZFYVE9O95405 1425 aa25.95■■□□□ 1.75
CCDC47-202ENST00000403162 WDR43Q15061 677 aaKnown RBP eCLIP25.95■■□□□ 1.74
CCDC47-202ENST00000403162 CFAP70Q5T0N1 1121 aa25.95■■□□□ 1.74
CCDC47-202ENST00000403162 MYOM1P52179 1685 aa25.95■■□□□ 1.74
CCDC47-202ENST00000403162 SENP3Q9H4L4 574 aaPredicted RBP25.95■■□□□ 1.74
CCDC47-202ENST00000403162 DDRGK1Q96HY6 314 aa25.94■■□□□ 1.74
CCDC47-202ENST00000403162 NPC1L1Q9UHC9 1359 aa25.94■■□□□ 1.74
CCDC47-202ENST00000403162 KDM4FA0A1W2PPD8 638 aa25.93■■□□□ 1.74
CCDC47-202ENST00000403162 C20orf194Q5TEA3 1177 aa25.93■■□□□ 1.74
CCDC47-202ENST00000403162 TMEM2Q9UHN6 1383 aa25.93■■□□□ 1.74
CCDC47-202ENST00000403162 PPM1GO15355 546 aaPredicted RBP25.92■■□□□ 1.74
CCDC47-202ENST00000403162 CENPQQ7L2Z9 268 aaPredicted RBP25.92■■□□□ 1.74
CCDC47-202ENST00000403162 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.92■■□□□ 1.74
CCDC47-202ENST00000403162 CEP170BQ9Y4F5 1589 aaPredicted RBP25.92■■□□□ 1.74
CCDC47-202ENST00000403162 HDGFP51858 240 aaKnown RBP25.91■■□□□ 1.74
CCDC47-202ENST00000403162 THEMISQ8N1K5 641 aaPredicted RBP25.91■■□□□ 1.74
CCDC47-202ENST00000403162 KIAA1210Q9ULL0 1709 aa25.91■■□□□ 1.74
CCDC47-202ENST00000403162 SETD1BQ9UPS6 1966 aaKnown RBP25.9■■□□□ 1.74
CCDC47-202ENST00000403162 GOLGA2Q08379 1002 aa25.9■■□□□ 1.74
CCDC47-202ENST00000403162 C14orf93Q9H972 538 aaKnown RBP25.89■■□□□ 1.74
CCDC47-202ENST00000403162 NEFMP07197 916 aa25.88■■□□□ 1.73
CCDC47-202ENST00000403162 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.88■■□□□ 1.73
CCDC47-202ENST00000403162 LAS1LQ9Y4W2 734 aaKnown RBP25.88■■□□□ 1.73
CCDC47-202ENST00000403162 SKAP1Q86WV1 359 aa25.86■■□□□ 1.73
CCDC47-202ENST00000403162 EIF3AQ14152 1382 aaKnown RBP25.85■■□□□ 1.73
CCDC47-202ENST00000403162 ZNF142P52746 1687 aaPredicted RBP25.84■■□□□ 1.73
CCDC47-202ENST00000403162 SLFN5Q08AF3 891 aa25.84■■□□□ 1.73
CCDC47-202ENST00000403162 TXNDC2Q86VQ3 553 aa25.84■■□□□ 1.73
CCDC47-202ENST00000403162 EID1Q9Y6B2 187 aa25.84■■□□□ 1.73
CCDC47-202ENST00000403162 TRMT2AQ8IZ69 625 aaKnown RBP25.83■■□□□ 1.73
CCDC47-202ENST00000403162 SLIT1O75093 1534 aa25.83■■□□□ 1.73
CCDC47-202ENST00000403162 LTKP29376 864 aa25.83■■□□□ 1.73
CCDC47-202ENST00000403162 ARHGAP23Q9P227 1491 aa25.82■■□□□ 1.72
CCDC47-202ENST00000403162 TMEM132EQ6IEE7 984 aa25.82■■□□□ 1.72
CCDC47-202ENST00000403162 SETBP1Q9Y6X0 1596 aa25.8■■□□□ 1.72
CCDC47-202ENST00000403162 FAM161AQ3B820 660 aa25.78■■□□□ 1.72
CCDC47-202ENST00000403162 ALKQ9UM73 1620 aa25.78■■□□□ 1.72
CCDC47-202ENST00000403162 NKTRP30414 1462 aaKnown RBP25.78■■□□□ 1.72
CCDC47-202ENST00000403162 ADGRB1O14514 1584 aa25.77■■□□□ 1.72
CCDC47-202ENST00000403162 SLC24A1O60721 1099 aa25.77■■□□□ 1.72
CCDC47-202ENST00000403162 PLEKHG1Q9ULL1 1385 aa25.75■■□□□ 1.71
CCDC47-202ENST00000403162 C8orf34Q49A92 452 aa25.75■■□□□ 1.71
CCDC47-202ENST00000403162 NGEFQ8N5V2 710 aa25.74■■□□□ 1.71
CCDC47-202ENST00000403162 NRXN3Q9Y4C0 1643 aa25.74■■□□□ 1.71
CCDC47-202ENST00000403162 TRAK1Q9UPV9 953 aa25.73■■□□□ 1.71
CCDC47-202ENST00000403162 ANKLE2Q86XL3 938 aa25.72■■□□□ 1.71
CCDC47-202ENST00000403162 STK26Q9P289 416 aa25.71■■□□□ 1.71
CCDC47-202ENST00000403162 E9PSI1 815 aa25.7■■□□□ 1.7
CCDC47-202ENST00000403162 CCDC146Q8IYE0 955 aa25.7■■□□□ 1.7
CCDC47-202ENST00000403162 APAF1O14727 1248 aa25.69■■□□□ 1.7
CCDC47-202ENST00000403162 SPINK5Q9NQ38 1064 aaPredicted RBP25.68■■□□□ 1.7
CCDC47-202ENST00000403162 SETD1AO15047 1707 aaKnown RBP25.68■■□□□ 1.7
CCDC47-202ENST00000403162 ADAMTS13Q76LX8 1427 aa25.67■■□□□ 1.7
CCDC47-202ENST00000403162 VIRMAQ69YN4 1812 aaKnown RBP25.67■■□□□ 1.7
CCDC47-202ENST00000403162 SLC26A8Q96RN1 970 aa25.67■■□□□ 1.7
CCDC47-202ENST00000403162 YTHDC2Q9H6S0 1430 aaKnown RBP25.66■■□□□ 1.7
CCDC47-202ENST00000403162 METP08581 1390 aa25.66■■□□□ 1.7
CCDC47-202ENST00000403162 DAXXQ9UER7 740 aaPredicted RBP25.65■■□□□ 1.7
CCDC47-202ENST00000403162 NINLQ9Y2I6 1382 aa25.65■■□□□ 1.7
CCDC47-202ENST00000403162 SBNO2Q9Y2G9 1366 aa25.63■■□□□ 1.69
CCDC47-202ENST00000403162 NFKBIBQ15653 356 aa25.63■■□□□ 1.69
CCDC47-202ENST00000403162 CENPJQ9HC77 1338 aaPredicted RBP25.62■■□□□ 1.69
CCDC47-202ENST00000403162 POLR3AO14802 1390 aaPredicted RBP25.62■■□□□ 1.69
CCDC47-202ENST00000403162 BCAR3O75815 825 aa25.62■■□□□ 1.69
CCDC47-202ENST00000403162 MED14O60244 1454 aa25.61■■□□□ 1.69
CCDC47-202ENST00000403162 CARD14Q9BXL6 1004 aa25.61■■□□□ 1.69
CCDC47-202ENST00000403162 NCKAP5LQ9HCH0 1330 aa25.61■■□□□ 1.69
CCDC47-202ENST00000403162 TBX22Q9Y458 520 aa25.61■■□□□ 1.69
CCDC47-202ENST00000403162 PDE3AQ14432 1141 aa25.6■■□□□ 1.69
CCDC47-202ENST00000403162 CGNL1Q0VF96 1302 aa25.6■■□□□ 1.69
CCDC47-202ENST00000403162 ARHGEF28Q8N1W1 1705 aaKnown RBP25.59■■□□□ 1.69
CCDC47-202ENST00000403162 RGS3P49796 1198 aa25.59■■□□□ 1.69
CCDC47-202ENST00000403162 HSPA2P54652 639 aa25.59■■□□□ 1.69
CCDC47-202ENST00000403162 SLC4A3P48751 1232 aa25.59■■□□□ 1.69
CCDC47-202ENST00000403162 DIP2AQ14689 1571 aa25.57■■□□□ 1.68
CCDC47-202ENST00000403162 GSE1Q14687 1217 aa25.57■■□□□ 1.68
CCDC47-202ENST00000403162 LMTK3Q96Q04 1460 aa25.57■■□□□ 1.68
CCDC47-202ENST00000403162 SHPRHQ149N8 1683 aa25.57■■□□□ 1.68
CCDC47-202ENST00000403162 DMRT2Q9Y5R5 561 aa25.56■■□□□ 1.68
CCDC47-202ENST00000403162 ABCC11Q96J66 1382 aa25.56■■□□□ 1.68
CCDC47-202ENST00000403162 NPHP4O75161 1426 aaPredicted RBP25.56■■□□□ 1.68
CCDC47-202ENST00000403162 SAFB2Q14151 953 aaKnown RBP eCLIP25.56■■□□□ 1.68
CCDC47-202ENST00000403162 IL27Q8NEV9 243 aa25.56■■□□□ 1.68
CCDC47-202ENST00000403162 PRAM1Q96QH2 718 aa25.56■■□□□ 1.68
CCDC47-202ENST00000403162 POGKQ9P215 609 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms