RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 NCBP3Q53F19 620 aaKnown RBP17.1■□□□□ 0.33
PRAME-203ENST00000402697 TRMT2AQ8IZ69 625 aaKnown RBP17.1■□□□□ 0.33
PRAME-203ENST00000402697 PLEKHH1Q9ULM0 1364 aa17.1■□□□□ 0.33
PRAME-203ENST00000402697 ANP32AP39687 249 aaKnown RBP17.09■□□□□ 0.33
PRAME-203ENST00000402697 MLECQ14165 292 aa17.09■□□□□ 0.33
PRAME-203ENST00000402697 SLFN5Q08AF3 891 aa17.08■□□□□ 0.33
PRAME-203ENST00000402697 NSD2O96028 1365 aa17.08■□□□□ 0.33
PRAME-203ENST00000402697 NINLQ9Y2I6 1382 aa17.08■□□□□ 0.32
PRAME-203ENST00000402697 TMEM132EQ6IEE7 984 aa17.08■□□□□ 0.32
PRAME-203ENST00000402697 CARD14Q9BXL6 1004 aa17.08■□□□□ 0.32
PRAME-203ENST00000402697 SENP3-EIF4A1A0A087X0R7 540 aa17.06■□□□□ 0.32
PRAME-203ENST00000402697 E9PSI1 815 aa17.06■□□□□ 0.32
PRAME-203ENST00000402697 A2ML1A8K2U0 1454 aa17.06■□□□□ 0.32
PRAME-203ENST00000402697 TRAK1Q9UPV9 953 aa17.06■□□□□ 0.32
PRAME-203ENST00000402697 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
PRAME-203ENST00000402697 EVC2Q86UK5 1308 aa17.05■□□□□ 0.32
PRAME-203ENST00000402697 ZMYM3Q14202 1370 aa17.04■□□□□ 0.32
PRAME-203ENST00000402697 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
PRAME-203ENST00000402697 NOP58Q9Y2X3 529 aaKnown RBP17.03■□□□□ 0.32
PRAME-203ENST00000402697 NSD3Q9BZ95 1437 aa17.03■□□□□ 0.32
PRAME-203ENST00000402697 SETD1AO15047 1707 aaKnown RBP17.03■□□□□ 0.32
PRAME-203ENST00000402697 CGNL1Q0VF96 1302 aa17.02■□□□□ 0.32
PRAME-203ENST00000402697 CRBNQ96SW2 442 aa17.02■□□□□ 0.32
PRAME-203ENST00000402697 CENPQQ7L2Z9 268 aaPredicted RBP17.01■□□□□ 0.31
PRAME-203ENST00000402697 MORC1Q86VD1 984 aa17.01■□□□□ 0.31
PRAME-203ENST00000402697 ANKRD36BQ8N2N9 1353 aa17.01■□□□□ 0.31
PRAME-203ENST00000402697 ALKQ9UM73 1620 aa17■□□□□ 0.31
PRAME-203ENST00000402697 CFAP53Q96M91 514 aa17■□□□□ 0.31
PRAME-203ENST00000402697 FER1L4A9Z1Z3 1794 aa16.99■□□□□ 0.31
PRAME-203ENST00000402697 UBR1Q8IWV7 1749 aa16.99■□□□□ 0.31
PRAME-203ENST00000402697 APAF1O14727 1248 aa16.99■□□□□ 0.31
PRAME-203ENST00000402697 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
PRAME-203ENST00000402697 NRXN3Q9Y4C0 1643 aa16.98■□□□□ 0.31
PRAME-203ENST00000402697 AAMPQ13685 434 aa16.98■□□□□ 0.31
PRAME-203ENST00000402697 ESF1Q9H501 851 aaKnown RBP16.98■□□□□ 0.31
PRAME-203ENST00000402697 C3P01024 1663 aa16.98■□□□□ 0.31
PRAME-203ENST00000402697 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
PRAME-203ENST00000402697 BACH2Q9BYV9 841 aa16.98■□□□□ 0.31
PRAME-203ENST00000402697 SHPRHQ149N8 1683 aa16.97■□□□□ 0.31
PRAME-203ENST00000402697 RIMS2Q9UQ26 1411 aa16.97■□□□□ 0.31
PRAME-203ENST00000402697 PLIN1O60240 522 aa16.97■□□□□ 0.31
PRAME-203ENST00000402697 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
PRAME-203ENST00000402697 KDM2BQ8NHM5 1336 aa16.97■□□□□ 0.31
PRAME-203ENST00000402697 TULP4Q9NRJ4 1543 aa16.97■□□□□ 0.31
PRAME-203ENST00000402697 PDE4AP27815 886 aa16.97■□□□□ 0.31
PRAME-203ENST00000402697 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
PRAME-203ENST00000402697 PTPRMP28827 1452 aa16.96■□□□□ 0.31
PRAME-203ENST00000402697 TNRQ92752 1358 aa16.96■□□□□ 0.31
PRAME-203ENST00000402697 STAG3Q9UJ98 1225 aa16.96■□□□□ 0.31
PRAME-203ENST00000402697 PDE3AQ14432 1141 aa16.95■□□□□ 0.3
PRAME-203ENST00000402697 SLC12A5Q9H2X9 1139 aa16.95■□□□□ 0.3
PRAME-203ENST00000402697 WDR63Q8IWG1 891 aa16.95■□□□□ 0.3
PRAME-203ENST00000402697 ZBTB47Q9UFB7 747 aaPredicted RBP16.95■□□□□ 0.3
PRAME-203ENST00000402697 ATAD2Q6PL18 1390 aa16.95■□□□□ 0.3
PRAME-203ENST00000402697 MED14O60244 1454 aa16.94■□□□□ 0.3
PRAME-203ENST00000402697 CCDC146Q8IYE0 955 aa16.93■□□□□ 0.3
PRAME-203ENST00000402697 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
PRAME-203ENST00000402697 YTHDC2Q9H6S0 1430 aaKnown RBP16.93■□□□□ 0.3
PRAME-203ENST00000402697 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
PRAME-203ENST00000402697 WWC1Q8IX03 1113 aa16.92■□□□□ 0.3
PRAME-203ENST00000402697 ABCC11Q96J66 1382 aa16.91■□□□□ 0.3
PRAME-203ENST00000402697 STK26Q9P289 416 aa16.9■□□□□ 0.3
PRAME-203ENST00000402697 NLRP1Q9C000 1473 aa16.9■□□□□ 0.3
PRAME-203ENST00000402697 C20orf194Q5TEA3 1177 aa16.89■□□□□ 0.29
PRAME-203ENST00000402697 DDRGK1Q96HY6 314 aa16.89■□□□□ 0.29
PRAME-203ENST00000402697 DLC1Q96QB1 1528 aa16.89■□□□□ 0.29
PRAME-203ENST00000402697 ANKRD26Q9UPS8 1709 aa16.89■□□□□ 0.29
PRAME-203ENST00000402697 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.29
PRAME-203ENST00000402697 CT47B1P0C2W7 299 aaPredicted RBP16.88■□□□□ 0.29
PRAME-203ENST00000402697 TERF2IPQ9NYB0 399 aa16.88■□□□□ 0.29
PRAME-203ENST00000402697 KNDC1Q76NI1 1749 aa16.88■□□□□ 0.29
PRAME-203ENST00000402697 MTHFSP49914 203 aa16.87■□□□□ 0.29
PRAME-203ENST00000402697 DNAJC5Q9H3Z4 198 aa16.86■□□□□ 0.29
PRAME-203ENST00000402697 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
PRAME-203ENST00000402697 TMEM2Q9UHN6 1383 aa16.86■□□□□ 0.29
PRAME-203ENST00000402697 ADGRB2O60241 1585 aa16.86■□□□□ 0.29
PRAME-203ENST00000402697 MYH16Q9H6N6 1097 aa16.85■□□□□ 0.29
PRAME-203ENST00000402697 TCP11L2Q8N4U5 519 aa16.85■□□□□ 0.29
PRAME-203ENST00000402697 PNNQ9H307 717 aaKnown RBP16.85■□□□□ 0.29
PRAME-203ENST00000402697 CABP2Q9NPB3 220 aa16.85■□□□□ 0.29
PRAME-203ENST00000402697 CEBPAP49715 358 aaPredicted RBP16.84■□□□□ 0.29
PRAME-203ENST00000402697 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.84■□□□□ 0.29
PRAME-203ENST00000402697 PRAM1Q96QH2 718 aa16.84■□□□□ 0.29
PRAME-203ENST00000402697 FAM161AQ3B820 660 aa16.82■□□□□ 0.28
PRAME-203ENST00000402697 A0A1W2PP64 1363 aa16.82■□□□□ 0.28
PRAME-203ENST00000402697 RIMS1Q86UR5 1692 aaKnown RBP16.81■□□□□ 0.28
PRAME-203ENST00000402697 METP08581 1390 aa16.81■□□□□ 0.28
PRAME-203ENST00000402697 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
PRAME-203ENST00000402697 MINK1Q8N4C8 1332 aaPredicted RBP16.81■□□□□ 0.28
PRAME-203ENST00000402697 SLIT1O75093 1534 aa16.81■□□□□ 0.28
PRAME-203ENST00000402697 CPS1P31327 1500 aa16.81■□□□□ 0.28
PRAME-203ENST00000402697 BCAR3O75815 825 aa16.81■□□□□ 0.28
PRAME-203ENST00000402697 SRPK2P78362 688 aaKnown RBP16.81■□□□□ 0.28
PRAME-203ENST00000402697 HDGFL2Q7Z4V5 671 aaPredicted RBP16.81■□□□□ 0.28
PRAME-203ENST00000402697 ARHGAP23Q9P227 1491 aa16.8■□□□□ 0.28
PRAME-203ENST00000402697 POGKQ9P215 609 aa16.8■□□□□ 0.28
PRAME-203ENST00000402697 IL16Q14005 1332 aa16.8■□□□□ 0.28
PRAME-203ENST00000402697 TECPR2O15040 1411 aa16.8■□□□□ 0.28
PRAME-203ENST00000402697 RARSP54136 660 aaKnown RBP16.79■□□□□ 0.28
PRAME-203ENST00000402697 MAPK8IP3Q9UPT6 1336 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms