RNA–Protein interactions for RNA: ENST00000400777.7

CASP9-204, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-204ENST00000400777 PTCH1Q13635 1447 aa22.33■■□□□ 1.17
CASP9-204ENST00000400777 KCNA6P17658 529 aa22.32■■□□□ 1.16
CASP9-204ENST00000400777 XRN1Q8IZH2 1706 aaKnown RBP22.3■■□□□ 1.16
CASP9-204ENST00000400777 TULP4Q9NRJ4 1543 aa22.28■■□□□ 1.16
CASP9-204ENST00000400777 STRCQ7RTU9 1775 aa22.27■■□□□ 1.16
CASP9-204ENST00000400777 CHD2O14647 1828 aaKnown RBP22.27■■□□□ 1.16
CASP9-204ENST00000400777 SRPK2P78362 688 aaKnown RBP22.26■■□□□ 1.15
CASP9-204ENST00000400777 PUS7Q96PZ0 661 aaKnown RBP22.25■■□□□ 1.15
CASP9-204ENST00000400777 CABP2Q9NPB3 220 aa22.25■■□□□ 1.15
CASP9-204ENST00000400777 CDK19Q9BWU1 502 aa22.24■■□□□ 1.15
CASP9-204ENST00000400777 WASLO00401 505 aaPredicted RBP22.22■■□□□ 1.15
CASP9-204ENST00000400777 NWD1Q149M9 1564 aa22.21■■□□□ 1.15
CASP9-204ENST00000400777 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
CASP9-204ENST00000400777 TMC1Q8TDI8 760 aa22.2■■□□□ 1.14
CASP9-204ENST00000400777 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.2■■□□□ 1.14
CASP9-204ENST00000400777 ATAD2Q6PL18 1390 aa22.19■■□□□ 1.14
CASP9-204ENST00000400777 PANK3Q9H999 370 aa22.19■■□□□ 1.14
CASP9-204ENST00000400777 RBM33Q96EV2 1170 aaKnown RBP22.17■■□□□ 1.14
CASP9-204ENST00000400777 ADGRB2O60241 1585 aa22.17■■□□□ 1.14
CASP9-204ENST00000400777 NKTRP30414 1462 aaKnown RBP22.17■■□□□ 1.14
CASP9-204ENST00000400777 PROSER2Q86WR7 435 aaPredicted RBP22.16■■□□□ 1.14
CASP9-204ENST00000400777 SLC12A5Q9H2X9 1139 aa22.15■■□□□ 1.14
CASP9-204ENST00000400777 MYOM1P52179 1685 aa22.15■■□□□ 1.14
CASP9-204ENST00000400777 MIER1Q8N108 512 aa22.14■■□□□ 1.13
CASP9-204ENST00000400777 NINLQ9Y2I6 1382 aa22.14■■□□□ 1.13
CASP9-204ENST00000400777 ANP32CO43423 234 aa22.13■■□□□ 1.13
CASP9-204ENST00000400777 AEBP2Q6ZN18 517 aaPredicted RBP22.13■■□□□ 1.13
CASP9-204ENST00000400777 C14orf37Q86TY3 774 aa22.13■■□□□ 1.13
CASP9-204ENST00000400777 PER1O15534 1290 aaPredicted RBP22.12■■□□□ 1.13
CASP9-204ENST00000400777 NUDT16Q96DE0 195 aaKnown RBP22.12■■□□□ 1.13
CASP9-204ENST00000400777 ZNF335Q9H4Z2 1342 aaPredicted RBP22.11■■□□□ 1.13
CASP9-204ENST00000400777 ADGRL3Q9HAR2 1447 aa22.11■■□□□ 1.13
CASP9-204ENST00000400777 NUTM2FA1L443 756 aa22.1■■□□□ 1.13
CASP9-204ENST00000400777 CABP1Q9NZU7 370 aa22.1■■□□□ 1.13
CASP9-204ENST00000400777 CCDC61Q9Y6R9 512 aa22.1■■□□□ 1.13
CASP9-204ENST00000400777 STRCP1A6NGW2 1772 aa22.09■■□□□ 1.13
CASP9-204ENST00000400777 KNSTRNQ9Y448 316 aa22.09■■□□□ 1.13
CASP9-204ENST00000400777 PRR36Q9H6K5 1346 aa22.08■■□□□ 1.13
CASP9-204ENST00000400777 ATP7BP35670 1465 aa22.08■■□□□ 1.13
CASP9-204ENST00000400777 TMEM94Q12767 1356 aa22.08■■□□□ 1.13
CASP9-204ENST00000400777 NALCNQ8IZF0 1738 aa22.08■■□□□ 1.13
CASP9-204ENST00000400777 ANKRD36BQ8N2N9 1353 aa22.08■■□□□ 1.12
CASP9-204ENST00000400777 PPIP5K1Q6PFW1 1433 aa22.07■■□□□ 1.12
CASP9-204ENST00000400777 TERF2IPQ9NYB0 399 aa22.07■■□□□ 1.12
CASP9-204ENST00000400777 CDC42BPGQ6DT37 1551 aa22.06■■□□□ 1.12
CASP9-204ENST00000400777 CNGB1Q14028 1251 aaPredicted RBP22.06■■□□□ 1.12
CASP9-204ENST00000400777 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
CASP9-204ENST00000400777 CARD14Q9BXL6 1004 aa22.05■■□□□ 1.12
CASP9-204ENST00000400777 C19orf44Q9H6X5 657 aa22.05■■□□□ 1.12
CASP9-204ENST00000400777 A0A1W2PP64 1363 aa22.04■■□□□ 1.12
CASP9-204ENST00000400777 HDGFL2Q7Z4V5 671 aaPredicted RBP22.04■■□□□ 1.12
CASP9-204ENST00000400777 PRKRIP1Q9H875 184 aaPredicted RBP22.04■■□□□ 1.12
CASP9-204ENST00000400777 ANKARQ7Z5J8 1434 aa22.02■■□□□ 1.12
CASP9-204ENST00000400777 CD163L1Q9NR16 1453 aa22.02■■□□□ 1.12
CASP9-204ENST00000400777 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
CASP9-204ENST00000400777 LRRC7Q96NW7 1537 aa22■■□□□ 1.11
CASP9-204ENST00000400777 FMN2Q9NZ56 1722 aa22■■□□□ 1.11
CASP9-204ENST00000400777 AMER1Q5JTC6 1135 aaPredicted RBP22■■□□□ 1.11
CASP9-204ENST00000400777 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
CASP9-204ENST00000400777 USP32Q8NFA0 1604 aa22■■□□□ 1.11
CASP9-204ENST00000400777 KTN1Q86UP2 1357 aaKnown RBP21.99■■□□□ 1.11
CASP9-204ENST00000400777 PLEKHG3A1L390 1219 aa21.99■■□□□ 1.11
CASP9-204ENST00000400777 ATF3P18847 181 aa21.98■■□□□ 1.11
CASP9-204ENST00000400777 CPSF1Q10570 1443 aaKnown RBP21.98■■□□□ 1.11
CASP9-204ENST00000400777 MSH6P52701 1360 aa21.97■■□□□ 1.11
CASP9-204ENST00000400777 TOPAZ1Q8N9V7 1692 aa21.97■■□□□ 1.11
CASP9-204ENST00000400777 DCCP43146 1447 aa21.97■■□□□ 1.11
CASP9-204ENST00000400777 PMFBP1Q8TBY8 1022 aa21.96■■□□□ 1.11
CASP9-204ENST00000400777 ACEP12821 1306 aa21.96■■□□□ 1.11
CASP9-204ENST00000400777 CGNL1Q0VF96 1302 aa21.96■■□□□ 1.11
CASP9-204ENST00000400777 ZNF692Q9BU19 519 aaPredicted RBP21.96■■□□□ 1.11
CASP9-204ENST00000400777 NPC1L1Q9UHC9 1359 aa21.96■■□□□ 1.11
CASP9-204ENST00000400777 RALBP1Q15311 655 aa21.95■■□□□ 1.1
CASP9-204ENST00000400777 CADPS2Q86UW7 1296 aa21.95■■□□□ 1.1
CASP9-204ENST00000400777 ITSN1Q15811 1721 aa21.94■■□□□ 1.1
CASP9-204ENST00000400777 NGDNQ8NEJ9 315 aaKnown RBP21.94■■□□□ 1.1
CASP9-204ENST00000400777 PARD3Q8TEW0 1356 aa21.93■■□□□ 1.1
CASP9-204ENST00000400777 ESCO1Q5FWF5 840 aa21.93■■□□□ 1.1
CASP9-204ENST00000400777 POLR3AO14802 1390 aaPredicted RBP21.92■■□□□ 1.1
CASP9-204ENST00000400777 PHF8Q9UPP1 1060 aa21.92■■□□□ 1.1
CASP9-204ENST00000400777 CCER2I3L3R5 266 aa21.91■■□□□ 1.1
CASP9-204ENST00000400777 EDC4Q6P2E9 1401 aaKnown RBP21.91■■□□□ 1.1
CASP9-204ENST00000400777 RGPD8O14715 1765 aaPredicted RBP21.91■■□□□ 1.1
CASP9-204ENST00000400777 XIRP1Q702N8 1843 aaKnown RBP21.9■■□□□ 1.1
CASP9-204ENST00000400777 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.9■■□□□ 1.1
CASP9-204ENST00000400777 C1orf167Q5SNV9 1468 aa21.9■■□□□ 1.1
CASP9-204ENST00000400777 MST1RQ04912 1400 aa21.89■■□□□ 1.09
CASP9-204ENST00000400777 ORAI2Q96SN7 254 aa21.89■■□□□ 1.09
CASP9-204ENST00000400777 NSD2O96028 1365 aa21.89■■□□□ 1.09
CASP9-204ENST00000400777 MYBBP1AQ9BQG0 1328 aaKnown RBP21.88■■□□□ 1.09
CASP9-204ENST00000400777 USP6P35125 1406 aa21.88■■□□□ 1.09
CASP9-204ENST00000400777 FYB1O15117 783 aa21.87■■□□□ 1.09
CASP9-204ENST00000400777 LTBP4Q8N2S1 1624 aa21.86■■□□□ 1.09
CASP9-204ENST00000400777 AKAP12Q02952 1782 aa21.86■■□□□ 1.09
CASP9-204ENST00000400777 MORC1Q86VD1 984 aa21.86■■□□□ 1.09
CASP9-204ENST00000400777 GGNBP2Q9H3C7 697 aa21.86■■□□□ 1.09
CASP9-204ENST00000400777 MON2Q7Z3U7 1717 aa21.85■■□□□ 1.09
CASP9-204ENST00000400777 TTC21BQ7Z4L5 1316 aa21.84■■□□□ 1.09
CASP9-204ENST00000400777 FOXO3O43524 673 aa21.82■■□□□ 1.08
CASP9-204ENST00000400777 PSME1Q06323 249 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms