RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
RPGRIP1-202ENST00000400017 IQGAP3Q86VI3 1631 aa17.05■□□□□ 0.32
RPGRIP1-202ENST00000400017 ERCC6L2Q5T890 1561 aa17.05■□□□□ 0.32
RPGRIP1-202ENST00000400017 WDR63Q8IWG1 891 aa17.05■□□□□ 0.32
RPGRIP1-202ENST00000400017 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
RPGRIP1-202ENST00000400017 MVPQ14764 893 aaKnown RBP17.04■□□□□ 0.32
RPGRIP1-202ENST00000400017 C22orf23Q9BZE7 217 aa17.04■□□□□ 0.32
RPGRIP1-202ENST00000400017 TBC1D2Q9BYX2 928 aa17.04■□□□□ 0.32
RPGRIP1-202ENST00000400017 UGGT1Q9NYU2 1555 aa17.04■□□□□ 0.32
RPGRIP1-202ENST00000400017 ABCC2Q92887 1545 aa17.04■□□□□ 0.32
RPGRIP1-202ENST00000400017 RIPK4P57078 832 aa17.03■□□□□ 0.32
RPGRIP1-202ENST00000400017 LNPKQ9C0E8 428 aa17.03■□□□□ 0.32
RPGRIP1-202ENST00000400017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.03■□□□□ 0.32
RPGRIP1-202ENST00000400017 MYO5CQ9NQX4 1742 aa17.03■□□□□ 0.32
RPGRIP1-202ENST00000400017 NPC1L1Q9UHC9 1359 aa17.03■□□□□ 0.32
RPGRIP1-202ENST00000400017 L1TD1Q5T7N2 865 aaKnown RBP17.02■□□□□ 0.31
RPGRIP1-202ENST00000400017 POLR3AO14802 1390 aaPredicted RBP17.01■□□□□ 0.31
RPGRIP1-202ENST00000400017 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
RPGRIP1-202ENST00000400017 NOB1Q9ULX3 412 aaKnown RBP17.01■□□□□ 0.31
RPGRIP1-202ENST00000400017 NINLQ9Y2I6 1382 aa17.01■□□□□ 0.31
RPGRIP1-202ENST00000400017 FANCAO15360 1455 aa17■□□□□ 0.31
RPGRIP1-202ENST00000400017 ERVK-7P63135 1459 aa17■□□□□ 0.31
RPGRIP1-202ENST00000400017 GOLGA6L3A6NEY3 463 aa17■□□□□ 0.31
RPGRIP1-202ENST00000400017 SSH1Q8WYL5 1049 aa17■□□□□ 0.31
RPGRIP1-202ENST00000400017 VGFO15240 615 aaPredicted RBP17■□□□□ 0.31
RPGRIP1-202ENST00000400017 DDX19BQ9UMR2 479 aa17■□□□□ 0.31
RPGRIP1-202ENST00000400017 SYNMO15061 1565 aa17■□□□□ 0.31
RPGRIP1-202ENST00000400017 USP19O94966 1318 aa16.99■□□□□ 0.31
RPGRIP1-202ENST00000400017 ADGRL1O94910 1474 aa16.99■□□□□ 0.31
RPGRIP1-202ENST00000400017 TBC1D32Q96NH3 1257 aa16.99■□□□□ 0.31
RPGRIP1-202ENST00000400017 IPO8O15397 1037 aaKnown RBP16.98■□□□□ 0.31
RPGRIP1-202ENST00000400017 TRIM27P14373 513 aa16.98■□□□□ 0.31
RPGRIP1-202ENST00000400017 PLXNC1O60486 1568 aa16.97■□□□□ 0.31
RPGRIP1-202ENST00000400017 C14orf93Q9H972 538 aaKnown RBP16.97■□□□□ 0.31
RPGRIP1-202ENST00000400017 ANKRD45Q5TZF3 282 aa16.97■□□□□ 0.31
RPGRIP1-202ENST00000400017 MADDQ8WXG6 1647 aa16.97■□□□□ 0.31
RPGRIP1-202ENST00000400017 TMPOP42166 694 aaKnown RBP16.97■□□□□ 0.31
RPGRIP1-202ENST00000400017 C1orf115Q9H7X2 142 aa16.97■□□□□ 0.31
RPGRIP1-202ENST00000400017 TERF2IPQ9NYB0 399 aa16.97■□□□□ 0.31
RPGRIP1-202ENST00000400017 ATF7IPQ6VMQ6 1270 aa16.96■□□□□ 0.31
RPGRIP1-202ENST00000400017 TMEM57Q8N5G2 664 aa16.96■□□□□ 0.31
RPGRIP1-202ENST00000400017 HMOX1P09601 288 aa16.96■□□□□ 0.31
RPGRIP1-202ENST00000400017 FBLN1P23142 703 aa16.96■□□□□ 0.31
RPGRIP1-202ENST00000400017 CFAP65Q6ZU64 1925 aaKnown RBP16.96■□□□□ 0.3
RPGRIP1-202ENST00000400017 LAMC1P11047 1609 aa16.95■□□□□ 0.3
RPGRIP1-202ENST00000400017 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
RPGRIP1-202ENST00000400017 AAMPQ13685 434 aa16.95■□□□□ 0.3
RPGRIP1-202ENST00000400017 HDGFL2Q7Z4V5 671 aaPredicted RBP16.95■□□□□ 0.3
RPGRIP1-202ENST00000400017 TRPM2O94759 1503 aa16.95■□□□□ 0.3
RPGRIP1-202ENST00000400017 APBB1O00213 710 aa16.95■□□□□ 0.3
RPGRIP1-202ENST00000400017 NAP1L5Q96NT1 182 aaPredicted RBP16.95■□□□□ 0.3
RPGRIP1-202ENST00000400017 CLTCL1P53675 1640 aa16.94■□□□□ 0.3
RPGRIP1-202ENST00000400017 CHMP5Q9NZZ3 219 aa16.94■□□□□ 0.3
RPGRIP1-202ENST00000400017 KDM5AP29375 1690 aaKnown RBP16.94■□□□□ 0.3
RPGRIP1-202ENST00000400017 RAPGEF3O95398 923 aa16.94■□□□□ 0.3
RPGRIP1-202ENST00000400017 PTPRTO14522 1441 aa16.94■□□□□ 0.3
RPGRIP1-202ENST00000400017 ABCC1P33527 1531 aa16.93■□□□□ 0.3
RPGRIP1-202ENST00000400017 THUMPD2Q9BTF0 503 aaKnown RBP16.93■□□□□ 0.3
RPGRIP1-202ENST00000400017 RTEL1-TNFRSF6BF6WH68 1400 aa16.92■□□□□ 0.3
RPGRIP1-202ENST00000400017 PRAM1Q96QH2 718 aa16.92■□□□□ 0.3
RPGRIP1-202ENST00000400017 MCM4P33991 863 aa16.92■□□□□ 0.3
RPGRIP1-202ENST00000400017 TRAK2O60296 914 aa16.91■□□□□ 0.3
RPGRIP1-202ENST00000400017 PRKAR2BP31323 418 aa16.9■□□□□ 0.3
RPGRIP1-202ENST00000400017 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
RPGRIP1-202ENST00000400017 NCLP19338 710 aaKnown RBP16.9■□□□□ 0.3
RPGRIP1-202ENST00000400017 CHD1O14646 1710 aa16.89■□□□□ 0.29
RPGRIP1-202ENST00000400017 ATP7AQ04656 1500 aa16.89■□□□□ 0.29
RPGRIP1-202ENST00000400017 TRIM44Q96DX7 344 aaPredicted RBP16.89■□□□□ 0.29
RPGRIP1-202ENST00000400017 FAM43AQ8N2R8 423 aa16.89■□□□□ 0.29
RPGRIP1-202ENST00000400017 SOX12O15370 315 aa16.89■□□□□ 0.29
RPGRIP1-202ENST00000400017 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
RPGRIP1-202ENST00000400017 KIF16BQ96L93 1317 aa16.88■□□□□ 0.29
RPGRIP1-202ENST00000400017 CCDC27Q2M243 656 aa16.88■□□□□ 0.29
RPGRIP1-202ENST00000400017 RNF17Q9BXT8 1623 aaKnown RBP16.87■□□□□ 0.29
RPGRIP1-202ENST00000400017 PRKCSHP14314 528 aaPredicted RBP16.87■□□□□ 0.29
RPGRIP1-202ENST00000400017 PANK2Q9BZ23 570 aa16.87■□□□□ 0.29
RPGRIP1-202ENST00000400017 IDI1Q13907 227 aa16.87■□□□□ 0.29
RPGRIP1-202ENST00000400017 MLECQ14165 292 aa16.87■□□□□ 0.29
RPGRIP1-202ENST00000400017 IQGAP1P46940 1657 aa16.86■□□□□ 0.29
RPGRIP1-202ENST00000400017 ZFYVE16Q7Z3T8 1539 aa16.86■□□□□ 0.29
RPGRIP1-202ENST00000400017 ZCCHC11Q5TAX3 1644 aaKnown RBP16.85■□□□□ 0.29
RPGRIP1-202ENST00000400017 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
RPGRIP1-202ENST00000400017 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
RPGRIP1-202ENST00000400017 FYB1O15117 783 aa16.84■□□□□ 0.29
RPGRIP1-202ENST00000400017 CHD1LQ86WJ1 897 aa16.84■□□□□ 0.29
RPGRIP1-202ENST00000400017 GBP4Q96PP9 640 aa16.84■□□□□ 0.29
RPGRIP1-202ENST00000400017 TRIM35Q9UPQ4 493 aa16.84■□□□□ 0.29
RPGRIP1-202ENST00000400017 RSPH6AQ9H0K4 717 aa16.84■□□□□ 0.29
RPGRIP1-202ENST00000400017 ANKRD36BQ8N2N9 1353 aa16.84■□□□□ 0.29
RPGRIP1-202ENST00000400017 DDX11L8A8MPP1 907 aa16.83■□□□□ 0.29
RPGRIP1-202ENST00000400017 CT47B1P0C2W7 299 aaPredicted RBP16.83■□□□□ 0.29
RPGRIP1-202ENST00000400017 ANTXR1Q9H6X2 564 aa16.83■□□□□ 0.29
RPGRIP1-202ENST00000400017 CDK19Q9BWU1 502 aa16.83■□□□□ 0.28
RPGRIP1-202ENST00000400017 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.28
RPGRIP1-202ENST00000400017 XRCC6P12956 609 aaKnown RBP eCLIP16.83■□□□□ 0.28
RPGRIP1-202ENST00000400017 ANP32BQ92688 251 aaKnown RBP16.83■□□□□ 0.28
RPGRIP1-202ENST00000400017 RPGRIP1LQ68CZ1 1315 aa16.83■□□□□ 0.28
RPGRIP1-202ENST00000400017 A0A1W2PP64 1363 aa16.81■□□□□ 0.28
RPGRIP1-202ENST00000400017 HDAC1Q13547 482 aaPredicted RBP16.81■□□□□ 0.28
RPGRIP1-202ENST00000400017 NUTM2FA1L443 756 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms