RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 NEUROD6Q96NK8 337 aa13.37□□□□□ -0.27
CACNA1C-215ENST00000399637 KDM4AO75164 1064 aa13.37□□□□□ -0.27
CACNA1C-215ENST00000399637 CENPQQ7L2Z9 268 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-215ENST00000399637 JPH4Q96JJ6 628 aa13.37□□□□□ -0.27
CACNA1C-215ENST00000399637 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
CACNA1C-215ENST00000399637 TEX35Q5T0J7 233 aa13.36□□□□□ -0.27
CACNA1C-215ENST00000399637 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
CACNA1C-215ENST00000399637 MAP7D2Q96T17 732 aa13.36□□□□□ -0.27
CACNA1C-215ENST00000399637 CDR1P51861 262 aa13.36□□□□□ -0.27
CACNA1C-215ENST00000399637 ZKSCAN2Q63HK3 967 aa13.36□□□□□ -0.27
CACNA1C-215ENST00000399637 NAP1L1P55209 391 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-215ENST00000399637 RUFY1Q96T51 708 aa13.36□□□□□ -0.27
CACNA1C-215ENST00000399637 BCCIPQ9P287 314 aaKnown RBP eCLIP13.36□□□□□ -0.27
CACNA1C-215ENST00000399637 CGNL1Q0VF96 1302 aa13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 MYBBP1AQ9BQG0 1328 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 RNF20Q5VTR2 975 aa13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 ERICH3Q5RHP9 1530 aa13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 EPS15P42566 896 aa13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 ROCK1Q13464 1354 aa13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 WASHC4Q2M389 1173 aa13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 EVC2Q86UK5 1308 aa13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 WDR78Q5VTH9 848 aa13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 HOMER1Q86YM7 354 aa13.35□□□□□ -0.27
CACNA1C-215ENST00000399637 G3BP1Q13283 466 aaKnown RBP eCLIP13.34□□□□□ -0.27
CACNA1C-215ENST00000399637 HSP90AA2PQ14568 343 aaPredicted RBP13.34□□□□□ -0.27
CACNA1C-215ENST00000399637 BICD2Q8TD16 824 aa13.34□□□□□ -0.27
CACNA1C-215ENST00000399637 FOSBP53539 338 aa13.34□□□□□ -0.27
CACNA1C-215ENST00000399637 ADAMTS2O95450 1211 aa13.34□□□□□ -0.27
CACNA1C-215ENST00000399637 FAM161AQ3B820 660 aa13.34□□□□□ -0.27
CACNA1C-215ENST00000399637 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
CACNA1C-215ENST00000399637 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
CACNA1C-215ENST00000399637 SMARCA4P51532 1647 aa13.33□□□□□ -0.27
CACNA1C-215ENST00000399637 CCDC18Q5T9S5 1454 aa13.33□□□□□ -0.27
CACNA1C-215ENST00000399637 REC8O95072 547 aa13.33□□□□□ -0.28
CACNA1C-215ENST00000399637 RAPGEF2Q9Y4G8 1499 aa13.33□□□□□ -0.28
CACNA1C-215ENST00000399637 E9PSI1 815 aa13.33□□□□□ -0.28
CACNA1C-215ENST00000399637 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-215ENST00000399637 ABTB2Q8N961 1025 aa13.33□□□□□ -0.28
CACNA1C-215ENST00000399637 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
CACNA1C-215ENST00000399637 SAFBQ15424 915 aaKnown RBP eCLIP13.32□□□□□ -0.28
CACNA1C-215ENST00000399637 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
CACNA1C-215ENST00000399637 MATR3P43243 847 aaKnown RBP eCLIP13.32□□□□□ -0.28
CACNA1C-215ENST00000399637 BRMS1Q9HCU9 246 aa13.32□□□□□ -0.28
CACNA1C-215ENST00000399637 TXNDC2Q86VQ3 553 aa13.31□□□□□ -0.28
CACNA1C-215ENST00000399637 SASS6Q6UVJ0 657 aa13.31□□□□□ -0.28
CACNA1C-215ENST00000399637 ACBD3Q9H3P7 528 aa13.31□□□□□ -0.28
CACNA1C-215ENST00000399637 PANK3Q9H999 370 aa13.3□□□□□ -0.28
CACNA1C-215ENST00000399637 BCL2L13Q9BXK5 485 aa13.3□□□□□ -0.28
CACNA1C-215ENST00000399637 NLRP6P59044 892 aa13.3□□□□□ -0.28
CACNA1C-215ENST00000399637 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
CACNA1C-215ENST00000399637 SCLT1Q96NL6 688 aa13.29□□□□□ -0.28
CACNA1C-215ENST00000399637 NGLY1Q96IV0 654 aa13.29□□□□□ -0.28
CACNA1C-215ENST00000399637 CNNM1Q9NRU3 951 aa13.29□□□□□ -0.28
CACNA1C-215ENST00000399637 SLC3A2P08195 630 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-215ENST00000399637 RDXP35241 583 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-215ENST00000399637 TMOD2Q9NZR1 351 aa13.29□□□□□ -0.28
CACNA1C-215ENST00000399637 STK11IPQ8N1F8 1099 aa13.29□□□□□ -0.28
CACNA1C-215ENST00000399637 NEBLO76041 1014 aa13.28□□□□□ -0.28
CACNA1C-215ENST00000399637 CRBNQ96SW2 442 aa13.28□□□□□ -0.28
CACNA1C-215ENST00000399637 HSP90AB3PQ58FF7 597 aa13.28□□□□□ -0.28
CACNA1C-215ENST00000399637 DDX19BQ9UMR2 479 aa13.28□□□□□ -0.28
CACNA1C-215ENST00000399637 OLFM4Q6UX06 510 aa13.28□□□□□ -0.28
CACNA1C-215ENST00000399637 TSPYL4Q9UJ04 414 aa13.28□□□□□ -0.28
CACNA1C-215ENST00000399637 SMC3Q9UQE7 1217 aa13.28□□□□□ -0.28
CACNA1C-215ENST00000399637 CCDC173Q0VFZ6 552 aa13.28□□□□□ -0.28
CACNA1C-215ENST00000399637 TATP17735 454 aaPredicted RBP13.27□□□□□ -0.28
CACNA1C-215ENST00000399637 CABP4P57796 275 aa13.27□□□□□ -0.28
CACNA1C-215ENST00000399637 L3MBTL2Q969R5 705 aa13.27□□□□□ -0.28
CACNA1C-215ENST00000399637 ERC2O15083 957 aa13.27□□□□□ -0.28
CACNA1C-215ENST00000399637 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.29
CACNA1C-215ENST00000399637 API5Q9BZZ5 524 aaKnown RBP13.27□□□□□ -0.29
CACNA1C-215ENST00000399637 PTPRGP23470 1445 aa13.27□□□□□ -0.29
CACNA1C-215ENST00000399637 ANKRD62A6NC57 917 aa13.27□□□□□ -0.29
CACNA1C-215ENST00000399637 XBP1P17861 261 aa13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 HSP90AB4PQ58FF6 505 aa13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 GNL3LQ9NVN8 582 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 MYO6Q9UM54 1294 aa13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 DIAPH1O60610 1272 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 ARGLU1Q9NWB6 273 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 TBC1D2BQ9UPU7 963 aa13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 VPS37CA5D8V6 355 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 CCDC73Q6ZRK6 1079 aa13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 INTS3Q68E01 1043 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 KRT18P05783 430 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 HMGB2P26583 209 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 MAPK8IP2Q13387 824 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 CDK5RAP3Q96JB5 506 aa13.26□□□□□ -0.29
CACNA1C-215ENST00000399637 RALYLQ86SE5 291 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-215ENST00000399637 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
CACNA1C-215ENST00000399637 MNS1Q8NEH6 495 aa13.25□□□□□ -0.29
CACNA1C-215ENST00000399637 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
CACNA1C-215ENST00000399637 CAGE1Q8TC20 777 aa13.25□□□□□ -0.29
CACNA1C-215ENST00000399637 NINLQ9Y2I6 1382 aa13.25□□□□□ -0.29
CACNA1C-215ENST00000399637 VTI1AQ96AJ9 217 aa13.24□□□□□ -0.29
CACNA1C-215ENST00000399637 SMG6Q86US8 1419 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-215ENST00000399637 RRP1P56182 461 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-215ENST00000399637 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
CACNA1C-215ENST00000399637 OFD1O75665 1012 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms