RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 GPATCH11Q8N954 259 aa15.06■□□□□ 0
CACNA1C-209ENST00000399603 MTMR7Q9Y216 660 aa15.06■□□□□ 0
CACNA1C-209ENST00000399603 MSH5O43196 834 aa15.05■□□□□ 0
CACNA1C-209ENST00000399603 ERLIN2O94905 339 aa15.05■□□□□ -0
CACNA1C-209ENST00000399603 IPO4Q8TEX9 1081 aaKnown RBP15.05■□□□□ -0
CACNA1C-209ENST00000399603 MTERF4Q7Z6M4 381 aaKnown RBP15.05■□□□□ -0
CACNA1C-209ENST00000399603 CCDC73Q6ZRK6 1079 aa15.05■□□□□ -0
CACNA1C-209ENST00000399603 CHMP4CQ96CF2 233 aa15.05■□□□□ -0
CACNA1C-209ENST00000399603 SMC2O95347 1197 aa15.04■□□□□ -0
CACNA1C-209ENST00000399603 NGEFQ8N5V2 710 aa15.04■□□□□ -0
CACNA1C-209ENST00000399603 SEPT11Q9NVA2 429 aaKnown RBP15.04■□□□□ -0
CACNA1C-209ENST00000399603 ST20-MTHFSA0A0A6YYL1 179 aa15.04■□□□□ -0
CACNA1C-209ENST00000399603 LTV1Q96GA3 475 aaPredicted RBP15.03■□□□□ -0
CACNA1C-209ENST00000399603 CEP63Q96MT8 703 aa15.03■□□□□ -0
CACNA1C-209ENST00000399603 FMNL2Q96PY5 1086 aa15.03■□□□□ -0
CACNA1C-209ENST00000399603 SMARCA4P51532 1647 aa15.03■□□□□ -0
CACNA1C-209ENST00000399603 TNNT1P13805 278 aa15.03■□□□□ -0
CACNA1C-209ENST00000399603 CCDC39Q9UFE4 941 aa15.03■□□□□ -0
CACNA1C-209ENST00000399603 ZNF644Q9H582 1327 aaPredicted RBP15.02■□□□□ -0
CACNA1C-209ENST00000399603 SYCP1Q15431 976 aa15.02■□□□□ -0
CACNA1C-209ENST00000399603 USP8P40818 1118 aa15.02□□□□□ -0.01
CACNA1C-209ENST00000399603 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.02□□□□□ -0.01
CACNA1C-209ENST00000399603 TRIM5Q9C035 493 aa15.02□□□□□ -0.01
CACNA1C-209ENST00000399603 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
CACNA1C-209ENST00000399603 PUS7Q96PZ0 661 aaKnown RBP15.01□□□□□ -0.01
CACNA1C-209ENST00000399603 ELL2O00472 640 aaPredicted RBP15.01□□□□□ -0.01
CACNA1C-209ENST00000399603 FAM177A1Q8N128 213 aaPredicted RBP15.01□□□□□ -0.01
CACNA1C-209ENST00000399603 ZKSCAN1P17029 563 aaPredicted RBP15.01□□□□□ -0.01
CACNA1C-209ENST00000399603 NASPP49321 788 aaPredicted RBP15.01□□□□□ -0.01
CACNA1C-209ENST00000399603 SPC24Q8NBT2 197 aa15□□□□□ -0.01
CACNA1C-209ENST00000399603 PDE4AP27815 886 aa15□□□□□ -0.01
CACNA1C-209ENST00000399603 TRDNQ13061 729 aa15□□□□□ -0.01
CACNA1C-209ENST00000399603 SMC3Q9UQE7 1217 aa15□□□□□ -0.01
CACNA1C-209ENST00000399603 CENPJQ9HC77 1338 aaPredicted RBP15□□□□□ -0.01
CACNA1C-209ENST00000399603 BCL2L13Q9BXK5 485 aa15□□□□□ -0.01
CACNA1C-209ENST00000399603 AQRO60306 1485 aaKnown RBP eCLIP15□□□□□ -0.01
CACNA1C-209ENST00000399603 SDF4Q9BRK5 362 aa15□□□□□ -0.01
CACNA1C-209ENST00000399603 EIF3AQ14152 1382 aaKnown RBP15□□□□□ -0.01
CACNA1C-209ENST00000399603 ERICH2A1L162 156 aa15□□□□□ -0.01
CACNA1C-209ENST00000399603 CGNL1Q0VF96 1302 aa14.99□□□□□ -0.01
CACNA1C-209ENST00000399603 MPNDQ8N594 471 aa14.99□□□□□ -0.01
CACNA1C-209ENST00000399603 NAT10Q9H0A0 1025 aaKnown RBP14.99□□□□□ -0.01
CACNA1C-209ENST00000399603 PPM1FP49593 454 aaPredicted RBP14.99□□□□□ -0.01
CACNA1C-209ENST00000399603 FAM161AQ3B820 660 aa14.99□□□□□ -0.01
CACNA1C-209ENST00000399603 FYB1O15117 783 aa14.99□□□□□ -0.01
CACNA1C-209ENST00000399603 SAFBQ15424 915 aaKnown RBP eCLIP14.99□□□□□ -0.01
CACNA1C-209ENST00000399603 CCDC112Q8NEF3 446 aa14.99□□□□□ -0.01
CACNA1C-209ENST00000399603 DNAJC2Q99543 621 aaKnown RBP14.99□□□□□ -0.01
CACNA1C-209ENST00000399603 CCDC181Q5TID7 509 aa14.98□□□□□ -0.01
CACNA1C-209ENST00000399603 VPS37DQ86XT2 251 aa14.98□□□□□ -0.01
CACNA1C-209ENST00000399603 GBP2P32456 591 aaPredicted RBP14.97□□□□□ -0.01
CACNA1C-209ENST00000399603 TERF2IPQ9NYB0 399 aa14.97□□□□□ -0.01
CACNA1C-209ENST00000399603 PDCL3Q9H2J4 239 aa14.97□□□□□ -0.01
CACNA1C-209ENST00000399603 RRP7AQ9Y3A4 280 aaKnown RBP14.97□□□□□ -0.01
CACNA1C-209ENST00000399603 NGDNQ8NEJ9 315 aaKnown RBP14.97□□□□□ -0.01
CACNA1C-209ENST00000399603 CHMP4AQ9BY43 222 aa14.97□□□□□ -0.01
CACNA1C-209ENST00000399603 PANK3Q9H999 370 aa14.97□□□□□ -0.01
CACNA1C-209ENST00000399603 SMARCE1Q969G3 411 aa14.97□□□□□ -0.01
CACNA1C-209ENST00000399603 TRERF1Q96PN7 1200 aa14.97□□□□□ -0.01
CACNA1C-209ENST00000399603 CFAP45Q9UL16 551 aa14.97□□□□□ -0.01
CACNA1C-209ENST00000399603 EID1Q9Y6B2 187 aa14.97□□□□□ -0.01
CACNA1C-209ENST00000399603 ATP2B1P20020 1258 aa14.96□□□□□ -0.01
CACNA1C-209ENST00000399603 WWC2Q6AWC2 1192 aa14.96□□□□□ -0.01
CACNA1C-209ENST00000399603 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
CACNA1C-209ENST00000399603 CCDC144AA2RUR9 1427 aa14.96□□□□□ -0.01
CACNA1C-209ENST00000399603 CCDC102AQ96A19 550 aa14.96□□□□□ -0.02
CACNA1C-209ENST00000399603 CCDC27Q2M243 656 aa14.95□□□□□ -0.02
CACNA1C-209ENST00000399603 LRRFIP2Q9Y608 721 aaKnown RBP14.95□□□□□ -0.02
CACNA1C-209ENST00000399603 RUFY2Q8WXA3 655 aa14.95□□□□□ -0.02
CACNA1C-209ENST00000399603 NLRP13Q86W25 1043 aa14.95□□□□□ -0.02
CACNA1C-209ENST00000399603 MAGEC2Q9UBF1 373 aaPredicted RBP14.95□□□□□ -0.02
CACNA1C-209ENST00000399603 SERPINA10Q9UK55 444 aa14.95□□□□□ -0.02
CACNA1C-209ENST00000399603 PLIN1O60240 522 aa14.95□□□□□ -0.02
CACNA1C-209ENST00000399603 CHMP5Q9NZZ3 219 aa14.94□□□□□ -0.02
CACNA1C-209ENST00000399603 MAP2K1Q02750 393 aaPredicted RBP14.94□□□□□ -0.02
CACNA1C-209ENST00000399603 IKQ13123 557 aaPredicted RBP14.94□□□□□ -0.02
CACNA1C-209ENST00000399603 LRRCC1Q9C099 1032 aa14.94□□□□□ -0.02
CACNA1C-209ENST00000399603 PRDM10Q9NQV6 1147 aa14.94□□□□□ -0.02
CACNA1C-209ENST00000399603 GAPVD1Q14C86 1478 aa14.94□□□□□ -0.02
CACNA1C-209ENST00000399603 RBM33Q96EV2 1170 aaKnown RBP14.93□□□□□ -0.02
CACNA1C-209ENST00000399603 LRRFIP1Q32MZ4 808 aaKnown RBP14.93□□□□□ -0.02
CACNA1C-209ENST00000399603 FILIP1LQ4L180 1135 aa14.93□□□□□ -0.02
CACNA1C-209ENST00000399603 DDX23Q9BUQ8 820 aaKnown RBP14.93□□□□□ -0.02
CACNA1C-209ENST00000399603 KLHL34Q8N239 644 aa14.92□□□□□ -0.02
CACNA1C-209ENST00000399603 CCDC113Q9H0I3 377 aa14.92□□□□□ -0.02
CACNA1C-209ENST00000399603 PHLDB1Q86UU1 1377 aa14.92□□□□□ -0.02
CACNA1C-209ENST00000399603 CLGNO14967 610 aa14.92□□□□□ -0.02
CACNA1C-209ENST00000399603 MINK1Q8N4C8 1332 aaPredicted RBP14.92□□□□□ -0.02
CACNA1C-209ENST00000399603 NEBLO76041 1014 aa14.91□□□□□ -0.02
CACNA1C-209ENST00000399603 REC8O95072 547 aa14.91□□□□□ -0.02
CACNA1C-209ENST00000399603 EIF3JO75822 258 aaKnown RBP14.91□□□□□ -0.02
CACNA1C-209ENST00000399603 IFIT2P09913 472 aaKnown RBP14.91□□□□□ -0.02
CACNA1C-209ENST00000399603 SPATA24Q86W54 205 aa14.91□□□□□ -0.02
CACNA1C-209ENST00000399603 NECTIN2Q92692 538 aa14.91□□□□□ -0.02
CACNA1C-209ENST00000399603 RABEP1Q15276 862 aa14.9□□□□□ -0.02
CACNA1C-209ENST00000399603 BRPF3Q9ULD4 1205 aa14.9□□□□□ -0.02
CACNA1C-209ENST00000399603 KRT18P05783 430 aaKnown RBP14.9□□□□□ -0.02
CACNA1C-209ENST00000399603 NCAPD3P42695 1498 aa14.9□□□□□ -0.02
CACNA1C-209ENST00000399603 CAVIN1Q6NZI2 390 aaKnown RBP14.9□□□□□ -0.02
CACNA1C-209ENST00000399603 RNF20Q5VTR2 975 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms