RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 NLRP6P59044 892 aa15.98■□□□□ 0.15
ITSN1-208ENST00000399349 NUCB2P80303 420 aa15.98■□□□□ 0.15
ITSN1-208ENST00000399349 RAPGEF4Q8WZA2 1011 aa15.97■□□□□ 0.15
ITSN1-208ENST00000399349 UBTFL1P0CB47 393 aaPredicted RBP15.97■□□□□ 0.15
ITSN1-208ENST00000399349 WASHC4Q2M389 1173 aa15.97■□□□□ 0.15
ITSN1-208ENST00000399349 EXOSC9Q06265 439 aaKnown RBP15.97■□□□□ 0.15
ITSN1-208ENST00000399349 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
ITSN1-208ENST00000399349 ROCK1Q13464 1354 aa15.96■□□□□ 0.15
ITSN1-208ENST00000399349 ANKRD50Q9ULJ7 1429 aa15.96■□□□□ 0.15
ITSN1-208ENST00000399349 TSR2Q969E8 191 aaKnown RBP15.96■□□□□ 0.15
ITSN1-208ENST00000399349 NOL10Q9BSC4 688 aaKnown RBP15.95■□□□□ 0.14
ITSN1-208ENST00000399349 BCAR3O75815 825 aa15.95■□□□□ 0.14
ITSN1-208ENST00000399349 PRKAR2BP31323 418 aa15.95■□□□□ 0.14
ITSN1-208ENST00000399349 SASS6Q6UVJ0 657 aa15.95■□□□□ 0.14
ITSN1-208ENST00000399349 FYB1O15117 783 aa15.95■□□□□ 0.14
ITSN1-208ENST00000399349 CDC45O75419 566 aa15.95■□□□□ 0.14
ITSN1-208ENST00000399349 SURF6O75683 361 aaKnown RBP15.95■□□□□ 0.14
ITSN1-208ENST00000399349 CCDC27Q2M243 656 aa15.95■□□□□ 0.14
ITSN1-208ENST00000399349 ERC2O15083 957 aa15.95■□□□□ 0.14
ITSN1-208ENST00000399349 IPO7O95373 1038 aaKnown RBP15.95■□□□□ 0.14
ITSN1-208ENST00000399349 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
ITSN1-208ENST00000399349 FAM43AQ8N2R8 423 aa15.95■□□□□ 0.14
ITSN1-208ENST00000399349 MTMR7Q9Y216 660 aa15.95■□□□□ 0.14
ITSN1-208ENST00000399349 TPM2P07951 284 aa15.94■□□□□ 0.14
ITSN1-208ENST00000399349 FAM69CQ0P6D2 419 aa15.94■□□□□ 0.14
ITSN1-208ENST00000399349 IFT57Q9NWB7 429 aa15.94■□□□□ 0.14
ITSN1-208ENST00000399349 PDZRN3Q9UPQ7 1066 aa15.94■□□□□ 0.14
ITSN1-208ENST00000399349 AMOTL1Q8IY63 956 aa15.93■□□□□ 0.14
ITSN1-208ENST00000399349 FAM177BA6PVY3 158 aa15.93■□□□□ 0.14
ITSN1-208ENST00000399349 CCDC73Q6ZRK6 1079 aa15.93■□□□□ 0.14
ITSN1-208ENST00000399349 RALYLQ86SE5 291 aaKnown RBP15.93■□□□□ 0.14
ITSN1-208ENST00000399349 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
ITSN1-208ENST00000399349 SLC12A5Q9H2X9 1139 aa15.93■□□□□ 0.14
ITSN1-208ENST00000399349 NEK4P51957 841 aa15.93■□□□□ 0.14
ITSN1-208ENST00000399349 HSP90AB4PQ58FF6 505 aa15.93■□□□□ 0.14
ITSN1-208ENST00000399349 ZNF771Q7L3S4 317 aaPredicted RBP15.92■□□□□ 0.14
ITSN1-208ENST00000399349 GAPVD1Q14C86 1478 aa15.92■□□□□ 0.14
ITSN1-208ENST00000399349 TRIM34Q9BYJ4 488 aa15.92■□□□□ 0.14
ITSN1-208ENST00000399349 FSD1Q9BTV5 496 aa15.91■□□□□ 0.14
ITSN1-208ENST00000399349 CAVIN1Q6NZI2 390 aaKnown RBP15.91■□□□□ 0.14
ITSN1-208ENST00000399349 BRD4O60885 1362 aaPredicted RBP15.91■□□□□ 0.14
ITSN1-208ENST00000399349 ERICH2A1L162 156 aa15.91■□□□□ 0.14
ITSN1-208ENST00000399349 ATP2B1P20020 1258 aa15.91■□□□□ 0.14
ITSN1-208ENST00000399349 PATL2C9JE40 543 aaKnown RBP15.91■□□□□ 0.14
ITSN1-208ENST00000399349 ANKRD20A12PQ8NF67 263 aa15.9■□□□□ 0.14
ITSN1-208ENST00000399349 NBPF8Q3BBV2 869 aa15.9■□□□□ 0.14
ITSN1-208ENST00000399349 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
ITSN1-208ENST00000399349 CLASRPQ8N2M8 674 aaKnown RBP15.9■□□□□ 0.14
ITSN1-208ENST00000399349 TCEAL9Q9UHQ7 104 aa15.9■□□□□ 0.14
ITSN1-208ENST00000399349 AKNAQ7Z591 1439 aa15.9■□□□□ 0.14
ITSN1-208ENST00000399349 TRAK2O60296 914 aa15.9■□□□□ 0.14
ITSN1-208ENST00000399349 NASPP49321 788 aaPredicted RBP15.9■□□□□ 0.14
ITSN1-208ENST00000399349 CCDC184Q52MB2 194 aa15.9■□□□□ 0.14
ITSN1-208ENST00000399349 SDF4Q9BRK5 362 aa15.9■□□□□ 0.14
ITSN1-208ENST00000399349 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
ITSN1-208ENST00000399349 TWISTNBQ3B726 338 aaPredicted RBP15.89■□□□□ 0.13
ITSN1-208ENST00000399349 LRRC9Q6ZRR7 1453 aa15.89■□□□□ 0.13
ITSN1-208ENST00000399349 DNAJC2Q99543 621 aaKnown RBP15.88■□□□□ 0.13
ITSN1-208ENST00000399349 R3HCC1Q9Y3T6 440 aaKnown RBP15.88■□□□□ 0.13
ITSN1-208ENST00000399349 SAFBQ15424 915 aaKnown RBP eCLIP15.88■□□□□ 0.13
ITSN1-208ENST00000399349 PRPF40AO75400 957 aaKnown RBP15.87■□□□□ 0.13
ITSN1-208ENST00000399349 GPS2Q13227 327 aa15.87■□□□□ 0.13
ITSN1-208ENST00000399349 CCDC70Q6NSX1 233 aa15.87■□□□□ 0.13
ITSN1-208ENST00000399349 ABTB2Q8N961 1025 aa15.87■□□□□ 0.13
ITSN1-208ENST00000399349 CCDC47Q96A33 483 aaKnown RBP15.87■□□□□ 0.13
ITSN1-208ENST00000399349 FMNL2Q96PY5 1086 aa15.87■□□□□ 0.13
ITSN1-208ENST00000399349 NOB1Q9ULX3 412 aaKnown RBP15.87■□□□□ 0.13
ITSN1-208ENST00000399349 MPNDQ8N594 471 aa15.87■□□□□ 0.13
ITSN1-208ENST00000399349 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.13
ITSN1-208ENST00000399349 KIF21BO75037 1637 aa15.87■□□□□ 0.13
ITSN1-208ENST00000399349 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
ITSN1-208ENST00000399349 UBE2Q2Q8WVN8 375 aa15.86■□□□□ 0.13
ITSN1-208ENST00000399349 BACH2Q9BYV9 841 aa15.86■□□□□ 0.13
ITSN1-208ENST00000399349 HOOK1Q9UJC3 728 aaKnown RBP15.86■□□□□ 0.13
ITSN1-208ENST00000399349 FIBPO43427 364 aa15.86■□□□□ 0.13
ITSN1-208ENST00000399349 NCOA2Q15596 1464 aa15.86■□□□□ 0.13
ITSN1-208ENST00000399349 CTDP1Q9Y5B0 961 aaPredicted RBP15.86■□□□□ 0.13
ITSN1-208ENST00000399349 CEBPZQ03701 1054 aaKnown RBP15.86■□□□□ 0.13
ITSN1-208ENST00000399349 MRE11P49959 708 aa15.85■□□□□ 0.13
ITSN1-208ENST00000399349 CNTROBQ8N137 903 aa15.85■□□□□ 0.13
ITSN1-208ENST00000399349 FBXO3Q9UK99 471 aa15.85■□□□□ 0.13
ITSN1-208ENST00000399349 GNAI3P08754 354 aa15.85■□□□□ 0.13
ITSN1-208ENST00000399349 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.85■□□□□ 0.13
ITSN1-208ENST00000399349 ATF3P18847 181 aa15.85■□□□□ 0.13
ITSN1-208ENST00000399349 NAP1L1P55209 391 aaKnown RBP15.85■□□□□ 0.13
ITSN1-208ENST00000399349 MIA2Q96PC5 1412 aa15.85■□□□□ 0.13
ITSN1-208ENST00000399349 SLC4A2P04920 1241 aa15.85■□□□□ 0.13
ITSN1-208ENST00000399349 TXNDC2Q86VQ3 553 aa15.85■□□□□ 0.13
ITSN1-208ENST00000399349 PDILTQ8N807 584 aa15.84■□□□□ 0.13
ITSN1-208ENST00000399349 SULT6B1Q6IMI4 303 aa15.84■□□□□ 0.13
ITSN1-208ENST00000399349 TTLL5Q6EMB2 1281 aa15.84■□□□□ 0.13
ITSN1-208ENST00000399349 CCDC30Q5VVM6 783 aa15.84■□□□□ 0.13
ITSN1-208ENST00000399349 MNS1Q8NEH6 495 aa15.83■□□□□ 0.13
ITSN1-208ENST00000399349 RBM33Q96EV2 1170 aaKnown RBP15.83■□□□□ 0.13
ITSN1-208ENST00000399349 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.83■□□□□ 0.13
ITSN1-208ENST00000399349 STAC3Q96MF2 364 aa15.83■□□□□ 0.12
ITSN1-208ENST00000399349 TRIM5Q9C035 493 aa15.83■□□□□ 0.12
ITSN1-208ENST00000399349 PNISRQ8TF01 805 aaKnown RBP15.82■□□□□ 0.12
ITSN1-208ENST00000399349 AAMPQ13685 434 aa15.82■□□□□ 0.12
ITSN1-208ENST00000399349 ESCO1Q5FWF5 840 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms