RNA–Protein interactions for RNA: ENST00000399100.6

SEC24B-202, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEC24B, Length 3,780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-202ENST00000399100 CFAP70Q5T0N1 1121 aa17.51■□□□□ 0.39
SEC24B-202ENST00000399100 MON2Q7Z3U7 1717 aa17.51■□□□□ 0.39
SEC24B-202ENST00000399100 KIF3BO15066 747 aa17.51■□□□□ 0.39
SEC24B-202ENST00000399100 SLC24A1O60721 1099 aa17.51■□□□□ 0.39
SEC24B-202ENST00000399100 SLFN5Q08AF3 891 aa17.51■□□□□ 0.39
SEC24B-202ENST00000399100 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
SEC24B-202ENST00000399100 MS4A1P11836 297 aa17.49■□□□□ 0.39
SEC24B-202ENST00000399100 NRKQ7Z2Y5 1582 aa17.47■□□□□ 0.39
SEC24B-202ENST00000399100 ARHGEF40Q8TER5 1519 aa17.47■□□□□ 0.39
SEC24B-202ENST00000399100 TOPAZ1Q8N9V7 1692 aa17.47■□□□□ 0.39
SEC24B-202ENST00000399100 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
SEC24B-202ENST00000399100 YEATS2Q9ULM3 1422 aa17.46■□□□□ 0.39
SEC24B-202ENST00000399100 BACH2Q9BYV9 841 aa17.44■□□□□ 0.38
SEC24B-202ENST00000399100 NSD2O96028 1365 aa17.44■□□□□ 0.38
SEC24B-202ENST00000399100 C20orf194Q5TEA3 1177 aa17.43■□□□□ 0.38
SEC24B-202ENST00000399100 NGEFQ8N5V2 710 aa17.43■□□□□ 0.38
SEC24B-202ENST00000399100 CCDC136Q96JN2 1154 aa17.43■□□□□ 0.38
SEC24B-202ENST00000399100 C3P01024 1663 aa17.43■□□□□ 0.38
SEC24B-202ENST00000399100 TCERG1O14776 1098 aaKnown RBP17.43■□□□□ 0.38
SEC24B-202ENST00000399100 SALL2Q9Y467 1007 aaPredicted RBP17.43■□□□□ 0.38
SEC24B-202ENST00000399100 NSD3Q9BZ95 1437 aa17.43■□□□□ 0.38
SEC24B-202ENST00000399100 ANKRD36BQ8N2N9 1353 aa17.43■□□□□ 0.38
SEC24B-202ENST00000399100 NALCNQ8IZF0 1738 aa17.42■□□□□ 0.38
SEC24B-202ENST00000399100 ABCC11Q96J66 1382 aa17.42■□□□□ 0.38
SEC24B-202ENST00000399100 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
SEC24B-202ENST00000399100 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
SEC24B-202ENST00000399100 KNSTRNQ9Y448 316 aa17.41■□□□□ 0.38
SEC24B-202ENST00000399100 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
SEC24B-202ENST00000399100 CENPJQ9HC77 1338 aaPredicted RBP17.4■□□□□ 0.38
SEC24B-202ENST00000399100 CRBNQ96SW2 442 aa17.39■□□□□ 0.37
SEC24B-202ENST00000399100 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
SEC24B-202ENST00000399100 RIMS1Q86UR5 1692 aaKnown RBP17.38■□□□□ 0.37
SEC24B-202ENST00000399100 PNPLA6Q8IY17 1366 aa17.38■□□□□ 0.37
SEC24B-202ENST00000399100 IPO9Q96P70 1041 aaKnown RBP17.38■□□□□ 0.37
SEC24B-202ENST00000399100 RGPD1P0DJD0 1748 aa17.37■□□□□ 0.37
SEC24B-202ENST00000399100 CPS1P31327 1500 aa17.37■□□□□ 0.37
SEC24B-202ENST00000399100 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
SEC24B-202ENST00000399100 ZMYM3Q14202 1370 aa17.37■□□□□ 0.37
SEC24B-202ENST00000399100 UBR1Q8IWV7 1749 aa17.37■□□□□ 0.37
SEC24B-202ENST00000399100 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
SEC24B-202ENST00000399100 MAP2P11137 1827 aaKnown RBP17.36■□□□□ 0.37
SEC24B-202ENST00000399100 PLIN1O60240 522 aa17.35■□□□□ 0.37
SEC24B-202ENST00000399100 GOLGA2Q08379 1002 aa17.34■□□□□ 0.37
SEC24B-202ENST00000399100 A2ML1A8K2U0 1454 aa17.34■□□□□ 0.37
SEC24B-202ENST00000399100 OSCARQ8IYS5 282 aa17.33■□□□□ 0.36
SEC24B-202ENST00000399100 YTHDC2Q9H6S0 1430 aaKnown RBP17.33■□□□□ 0.36
SEC24B-202ENST00000399100 NOP58Q9Y2X3 529 aaKnown RBP17.33■□□□□ 0.36
SEC24B-202ENST00000399100 MARF1Q9Y4F3 1742 aaKnown RBP17.32■□□□□ 0.36
SEC24B-202ENST00000399100 PDE4AP27815 886 aa17.32■□□□□ 0.36
SEC24B-202ENST00000399100 ITSN1Q15811 1721 aa17.32■□□□□ 0.36
SEC24B-202ENST00000399100 C8orf34Q49A92 452 aa17.3■□□□□ 0.36
SEC24B-202ENST00000399100 ATP7BP35670 1465 aa17.3■□□□□ 0.36
SEC24B-202ENST00000399100 A0A1W2PP64 1363 aa17.3■□□□□ 0.36
SEC24B-202ENST00000399100 PLEKHF1Q96S99 279 aa17.3■□□□□ 0.36
SEC24B-202ENST00000399100 TECPR2O15040 1411 aa17.29■□□□□ 0.36
SEC24B-202ENST00000399100 WWC1Q8IX03 1113 aa17.29■□□□□ 0.36
SEC24B-202ENST00000399100 LRRC7Q96NW7 1537 aa17.29■□□□□ 0.36
SEC24B-202ENST00000399100 E9PSI1 815 aa17.28■□□□□ 0.36
SEC24B-202ENST00000399100 CENPQQ7L2Z9 268 aaPredicted RBP17.28■□□□□ 0.36
SEC24B-202ENST00000399100 PPIP5K1Q6PFW1 1433 aa17.27■□□□□ 0.36
SEC24B-202ENST00000399100 CPSF1Q10570 1443 aaKnown RBP17.26■□□□□ 0.35
SEC24B-202ENST00000399100 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
SEC24B-202ENST00000399100 TSPOAP1O95153 1857 aa17.26■□□□□ 0.35
SEC24B-202ENST00000399100 N4BP2Q86UW6 1770 aaPredicted RBP17.26■□□□□ 0.35
SEC24B-202ENST00000399100 USP19O94966 1318 aa17.25■□□□□ 0.35
SEC24B-202ENST00000399100 APAF1O14727 1248 aa17.25■□□□□ 0.35
SEC24B-202ENST00000399100 SLC12A5Q9H2X9 1139 aa17.25■□□□□ 0.35
SEC24B-202ENST00000399100 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.25■□□□□ 0.35
SEC24B-202ENST00000399100 SLC52A1Q9NWF4 448 aa17.24■□□□□ 0.35
SEC24B-202ENST00000399100 IDI1Q13907 227 aa17.24■□□□□ 0.35
SEC24B-202ENST00000399100 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
SEC24B-202ENST00000399100 FMN2Q9NZ56 1722 aa17.24■□□□□ 0.35
SEC24B-202ENST00000399100 WDR43Q15061 677 aaKnown RBP eCLIP17.23■□□□□ 0.35
SEC24B-202ENST00000399100 WDR63Q8IWG1 891 aa17.23■□□□□ 0.35
SEC24B-202ENST00000399100 RAPGEF3O95398 923 aa17.23■□□□□ 0.35
SEC24B-202ENST00000399100 TUBGCP6Q96RT7 1819 aa17.22■□□□□ 0.35
SEC24B-202ENST00000399100 SKAP1Q86WV1 359 aa17.22■□□□□ 0.35
SEC24B-202ENST00000399100 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
SEC24B-202ENST00000399100 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.35
SEC24B-202ENST00000399100 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
SEC24B-202ENST00000399100 BCAR3O75815 825 aa17.2■□□□□ 0.34
SEC24B-202ENST00000399100 RUNDC1Q96C34 613 aa17.2■□□□□ 0.34
SEC24B-202ENST00000399100 VGFO15240 615 aaPredicted RBP17.19■□□□□ 0.34
SEC24B-202ENST00000399100 TMEM132EQ6IEE7 984 aa17.19■□□□□ 0.34
SEC24B-202ENST00000399100 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
SEC24B-202ENST00000399100 CGNL1Q0VF96 1302 aa17.18■□□□□ 0.34
SEC24B-202ENST00000399100 EVC2Q86UK5 1308 aa17.18■□□□□ 0.34
SEC24B-202ENST00000399100 TRAK1Q9UPV9 953 aa17.18■□□□□ 0.34
SEC24B-202ENST00000399100 ATAD2Q6PL18 1390 aa17.18■□□□□ 0.34
SEC24B-202ENST00000399100 IGHDP01880 384 aa17.17■□□□□ 0.34
SEC24B-202ENST00000399100 RARSP54136 660 aaKnown RBP17.17■□□□□ 0.34
SEC24B-202ENST00000399100 LRRC37A3O60309 1634 aa17.17■□□□□ 0.34
SEC24B-202ENST00000399100 AAMPQ13685 434 aa17.16■□□□□ 0.34
SEC24B-202ENST00000399100 CDK12Q9NYV4 1490 aaPredicted RBP17.16■□□□□ 0.34
SEC24B-202ENST00000399100 TRIM35Q9UPQ4 493 aa17.14■□□□□ 0.33
SEC24B-202ENST00000399100 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
SEC24B-202ENST00000399100 IL16Q14005 1332 aa17.12■□□□□ 0.33
SEC24B-202ENST00000399100 XRN1Q8IZH2 1706 aaKnown RBP17.12■□□□□ 0.33
SEC24B-202ENST00000399100 PIK3R4Q99570 1358 aa17.12■□□□□ 0.33
SEC24B-202ENST00000399100 MTHFSP49914 203 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms